Protein–RNA interactions for Protein: Q9UKS6

PACSIN3, Protein kinase C and casein kinase substrate in neurons protein 3, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3Q9UKS6 SNORA58B-201ENST00000364259 136 ntBASIC4.78□□□□□ -1.64
PACSIN3Q9UKS6 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
PACSIN3Q9UKS6 FCF1P10-201ENST00000407590 479 ntBASIC4.78□□□□□ -1.64
PACSIN3Q9UKS6 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.78□□□□□ -1.64
PACSIN3Q9UKS6 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.78□□□□□ -1.64
PACSIN3Q9UKS6 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PACSIN3Q9UKS6 FABP7P2-201ENST00000429946 379 ntBASIC4.78□□□□□ -1.64
PACSIN3Q9UKS6 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.78□□□□□ -1.64
PACSIN3Q9UKS6 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.78□□□□□ -1.64
PACSIN3Q9UKS6 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
PACSIN3Q9UKS6 AC093716.1-201ENST00000435923 377 ntBASIC4.78□□□□□ -1.64
PACSIN3Q9UKS6 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.78□□□□□ -1.64
PACSIN3Q9UKS6 AL450023.3-201ENST00000440592 271 ntBASIC4.78□□□□□ -1.64
PACSIN3Q9UKS6 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC4.78□□□□□ -1.64
PACSIN3Q9UKS6 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.78□□□□□ -1.64
PACSIN3Q9UKS6 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PACSIN3Q9UKS6 AC239367.2-201ENST00000447309 705 ntBASIC4.78□□□□□ -1.64
PACSIN3Q9UKS6 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.78□□□□□ -1.64
PACSIN3Q9UKS6 RPL7P31-201ENST00000450192 724 ntBASIC4.78□□□□□ -1.64
PACSIN3Q9UKS6 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PACSIN3Q9UKS6 AL445433.1-201ENST00000457507 257 ntBASIC4.78□□□□□ -1.64
PACSIN3Q9UKS6 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4.78□□□□□ -1.64
PACSIN3Q9UKS6 AC013828.1-201ENST00000481845 158 ntBASIC4.78□□□□□ -1.64
PACSIN3Q9UKS6 AC008953.1-201ENST00000497334 318 ntBASIC4.78□□□□□ -1.64
PACSIN3Q9UKS6 SETP14-201ENST00000497538 873 ntBASIC4.78□□□□□ -1.64
PACSIN3Q9UKS6 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.78□□□□□ -1.64
PACSIN3Q9UKS6 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.78□□□□□ -1.64
PACSIN3Q9UKS6 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.78□□□□□ -1.64
PACSIN3Q9UKS6 ARL4AP2-201ENST00000507378 601 ntBASIC4.78□□□□□ -1.64
PACSIN3Q9UKS6 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.78□□□□□ -1.64
PACSIN3Q9UKS6 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.78□□□□□ -1.64
PACSIN3Q9UKS6 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.78□□□□□ -1.64
PACSIN3Q9UKS6 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.78□□□□□ -1.64
PACSIN3Q9UKS6 GTF2IP8-201ENST00000560687 584 ntBASIC4.78□□□□□ -1.64
PACSIN3Q9UKS6 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.78□□□□□ -1.64
PACSIN3Q9UKS6 AL390726.5-202ENST00000564800 256 ntBASIC4.78□□□□□ -1.64
PACSIN3Q9UKS6 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.78□□□□□ -1.64
PACSIN3Q9UKS6 AC069307.1-201ENST00000602820 447 ntBASIC4.78□□□□□ -1.64
PACSIN3Q9UKS6 RNF138P2-201ENST00000603490 592 ntBASIC4.78□□□□□ -1.64
PACSIN3Q9UKS6 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PACSIN3Q9UKS6 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.78□□□□□ -1.64
PACSIN3Q9UKS6 LRRC77P-213ENST00000637727 880 ntBASIC4.78□□□□□ -1.64
PACSIN3Q9UKS6 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PACSIN3Q9UKS6 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
PACSIN3Q9UKS6 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PACSIN3Q9UKS6 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
PACSIN3Q9UKS6 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PACSIN3Q9UKS6 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
PACSIN3Q9UKS6 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
PACSIN3Q9UKS6 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.78□□□□□ -1.64
PACSIN3Q9UKS6 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.77□□□□□ -1.65
PACSIN3Q9UKS6 SPATA2P1-201ENST00000431223 2055 ntBASIC4.77□□□□□ -1.65
PACSIN3Q9UKS6 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
PACSIN3Q9UKS6 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PACSIN3Q9UKS6 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
PACSIN3Q9UKS6 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
PACSIN3Q9UKS6 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PACSIN3Q9UKS6 RPL21P132-201ENST00000331267 462 ntBASIC4.77□□□□□ -1.65
PACSIN3Q9UKS6 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PACSIN3Q9UKS6 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PACSIN3Q9UKS6 ARL4AP5-201ENST00000404372 599 ntBASIC4.77□□□□□ -1.65
PACSIN3Q9UKS6 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
PACSIN3Q9UKS6 RNU6-248P-201ENST00000410720 107 ntBASIC4.77□□□□□ -1.65
PACSIN3Q9UKS6 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.77□□□□□ -1.65
PACSIN3Q9UKS6 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC4.77□□□□□ -1.65
PACSIN3Q9UKS6 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.77□□□□□ -1.65
PACSIN3Q9UKS6 RGS17P1-201ENST00000423358 553 ntBASIC4.77□□□□□ -1.65
PACSIN3Q9UKS6 EIF4HP2-201ENST00000424380 563 ntBASIC4.77□□□□□ -1.65
PACSIN3Q9UKS6 RPL31P54-201ENST00000429803 370 ntBASIC4.77□□□□□ -1.65
PACSIN3Q9UKS6 RPS27P18-201ENST00000431701 247 ntBASIC4.77□□□□□ -1.65
PACSIN3Q9UKS6 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.77□□□□□ -1.65
PACSIN3Q9UKS6 AL353093.1-201ENST00000441292 436 ntBASIC4.77□□□□□ -1.65
PACSIN3Q9UKS6 RPL7P36-201ENST00000444633 681 ntBASIC4.77□□□□□ -1.65
PACSIN3Q9UKS6 AC004980.3-201ENST00000447046 365 ntBASIC4.77□□□□□ -1.65
PACSIN3Q9UKS6 RPS17P2-201ENST00000461663 408 ntBASIC4.77□□□□□ -1.65
PACSIN3Q9UKS6 RPS18P6-201ENST00000476880 458 ntBASIC4.77□□□□□ -1.65
PACSIN3Q9UKS6 RPSAP50-201ENST00000481955 852 ntBASIC4.77□□□□□ -1.65
PACSIN3Q9UKS6 HMGN2P25-201ENST00000486956 268 ntBASIC4.77□□□□□ -1.65
PACSIN3Q9UKS6 RN7SL441P-201ENST00000492388 296 ntBASIC4.77□□□□□ -1.65
PACSIN3Q9UKS6 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC4.77□□□□□ -1.65
PACSIN3Q9UKS6 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.77□□□□□ -1.65
PACSIN3Q9UKS6 AC091133.4-201ENST00000511142 308 ntBASIC4.77□□□□□ -1.65
PACSIN3Q9UKS6 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
PACSIN3Q9UKS6 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.77□□□□□ -1.65
PACSIN3Q9UKS6 AC012400.1-201ENST00000518452 381 ntBASIC4.77□□□□□ -1.65
PACSIN3Q9UKS6 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.77□□□□□ -1.65
PACSIN3Q9UKS6 AP002748.2-201ENST00000528671 348 ntBASIC4.77□□□□□ -1.65
PACSIN3Q9UKS6 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC4.77□□□□□ -1.65
PACSIN3Q9UKS6 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
PACSIN3Q9UKS6 AC123904.3-201ENST00000547218 814 ntBASIC4.77□□□□□ -1.65
PACSIN3Q9UKS6 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.77□□□□□ -1.65
PACSIN3Q9UKS6 AC087477.6-201ENST00000559595 843 ntBASIC4.77□□□□□ -1.65
PACSIN3Q9UKS6 AC020914.6-201ENST00000594327 272 ntBASIC4.77□□□□□ -1.65
PACSIN3Q9UKS6 AC027807.2-201ENST00000616099 408 ntBASIC4.77□□□□□ -1.65
PACSIN3Q9UKS6 AL121890.2-201ENST00000617644 465 ntBASIC4.77□□□□□ -1.65
PACSIN3Q9UKS6 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PACSIN3Q9UKS6 AC112204.3-201ENST00000623822 332 ntBASIC4.77□□□□□ -1.65
PACSIN3Q9UKS6 FER-210ENST00000628534 558 ntTSL 5 BASIC4.77□□□□□ -1.65
PACSIN3Q9UKS6 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PACSIN3Q9UKS6 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms