Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
COL20A1Q9P218 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
COL20A1Q9P218 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
COL20A1Q9P218 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
COL20A1Q9P218 MIR921-201ENST00000401133 56 ntBASIC4.99□□□□□ -1.61
COL20A1Q9P218 RN7SKP167-201ENST00000411047 285 ntBASIC4.99□□□□□ -1.61
COL20A1Q9P218 RPS20P14-201ENST00000412545 360 ntBASIC4.99□□□□□ -1.61
COL20A1Q9P218 RPS15AP38-201ENST00000413110 372 ntBASIC4.99□□□□□ -1.61
COL20A1Q9P218 RPS25P9-201ENST00000435591 252 ntBASIC4.99□□□□□ -1.61
COL20A1Q9P218 ARL4AP3-201ENST00000441452 574 ntBASIC4.99□□□□□ -1.61
COL20A1Q9P218 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC4.99□□□□□ -1.61
COL20A1Q9P218 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.99□□□□□ -1.61
COL20A1Q9P218 EIF4A1P11-201ENST00000451239 222 ntBASIC4.99□□□□□ -1.61
COL20A1Q9P218 AC108751.2-201ENST00000469993 231 ntBASIC4.99□□□□□ -1.61
COL20A1Q9P218 RPL30P6-201ENST00000475925 342 ntBASIC4.99□□□□□ -1.61
COL20A1Q9P218 RPL7P38-201ENST00000488396 739 ntBASIC4.99□□□□□ -1.61
COL20A1Q9P218 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.99□□□□□ -1.61
COL20A1Q9P218 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.99□□□□□ -1.61
COL20A1Q9P218 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.99□□□□□ -1.61
COL20A1Q9P218 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.99□□□□□ -1.61
COL20A1Q9P218 AC108475.1-201ENST00000507880 950 ntBASIC4.99□□□□□ -1.61
COL20A1Q9P218 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.99□□□□□ -1.61
COL20A1Q9P218 ATP1B1P1-201ENST00000509767 915 ntBASIC4.99□□□□□ -1.61
COL20A1Q9P218 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC4.99□□□□□ -1.61
COL20A1Q9P218 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
COL20A1Q9P218 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.99□□□□□ -1.61
COL20A1Q9P218 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.99□□□□□ -1.61
COL20A1Q9P218 OR5BC1P-201ENST00000529327 739 ntBASIC4.99□□□□□ -1.61
COL20A1Q9P218 SLC2A13P1-201ENST00000531560 322 ntBASIC4.99□□□□□ -1.61
COL20A1Q9P218 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.99□□□□□ -1.61
COL20A1Q9P218 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.99□□□□□ -1.61
COL20A1Q9P218 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.99□□□□□ -1.61
COL20A1Q9P218 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC4.99□□□□□ -1.61
COL20A1Q9P218 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC4.99□□□□□ -1.61
COL20A1Q9P218 AC135628.1-201ENST00000568867 534 ntBASIC4.99□□□□□ -1.61
COL20A1Q9P218 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.99□□□□□ -1.61
COL20A1Q9P218 RN7SL176P-201ENST00000580352 264 ntBASIC4.99□□□□□ -1.61
COL20A1Q9P218 AP005262.1-201ENST00000582646 997 ntBASIC4.99□□□□□ -1.61
COL20A1Q9P218 AC110760.3-201ENST00000598794 467 ntBASIC4.99□□□□□ -1.61
COL20A1Q9P218 AC010201.1-201ENST00000605051 540 ntBASIC4.99□□□□□ -1.61
COL20A1Q9P218 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.99□□□□□ -1.61
COL20A1Q9P218 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.99□□□□□ -1.61
COL20A1Q9P218 AC004223.4-201ENST00000612426 332 ntBASIC4.99□□□□□ -1.61
COL20A1Q9P218 AL445363.3-201ENST00000623080 671 ntBASIC4.99□□□□□ -1.61
COL20A1Q9P218 AC004943.3-201ENST00000624116 600 ntBASIC4.99□□□□□ -1.61
COL20A1Q9P218 AC120349.2-201ENST00000625002 298 ntBASIC4.99□□□□□ -1.61
COL20A1Q9P218 AC140479.6-201ENST00000633535 357 ntBASIC4.99□□□□□ -1.61
COL20A1Q9P218 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
COL20A1Q9P218 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL20A1Q9P218 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL20A1Q9P218 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.99□□□□□ -1.61
COL20A1Q9P218 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL20A1Q9P218 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.99□□□□□ -1.61
COL20A1Q9P218 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
COL20A1Q9P218 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL20A1Q9P218 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL20A1Q9P218 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL20A1Q9P218 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL20A1Q9P218 RNU6-216P-201ENST00000363282 104 ntBASIC4.98□□□□□ -1.61
COL20A1Q9P218 RNU6-553P-201ENST00000364047 96 ntBASIC4.98□□□□□ -1.61
COL20A1Q9P218 RNU6-1122P-201ENST00000384449 107 ntBASIC4.98□□□□□ -1.61
COL20A1Q9P218 RNU6-146P-201ENST00000384602 108 ntBASIC4.98□□□□□ -1.61
COL20A1Q9P218 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.98□□□□□ -1.61
COL20A1Q9P218 MOB4-205ENST00000409916 829 ntTSL 3 BASIC4.98□□□□□ -1.61
COL20A1Q9P218 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.98□□□□□ -1.61
COL20A1Q9P218 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.98□□□□□ -1.61
COL20A1Q9P218 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.98□□□□□ -1.61
COL20A1Q9P218 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.98□□□□□ -1.61
COL20A1Q9P218 RPS26P56-201ENST00000444468 240 ntBASIC4.98□□□□□ -1.61
COL20A1Q9P218 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.98□□□□□ -1.61
COL20A1Q9P218 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.98□□□□□ -1.61
COL20A1Q9P218 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.98□□□□□ -1.61
COL20A1Q9P218 RPL7P1-201ENST00000468161 747 ntBASIC4.98□□□□□ -1.61
COL20A1Q9P218 RPL7P9-201ENST00000468715 747 ntBASIC4.98□□□□□ -1.61
COL20A1Q9P218 RPL7P19-201ENST00000469948 618 ntBASIC4.98□□□□□ -1.61
COL20A1Q9P218 AC010683.1-201ENST00000473673 378 ntBASIC4.98□□□□□ -1.61
COL20A1Q9P218 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.98□□□□□ -1.61
COL20A1Q9P218 AC013828.1-201ENST00000481845 158 ntBASIC4.98□□□□□ -1.61
COL20A1Q9P218 NCOR1P1-202ENST00000486162 291 ntBASIC4.98□□□□□ -1.61
COL20A1Q9P218 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.98□□□□□ -1.61
COL20A1Q9P218 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.98□□□□□ -1.61
COL20A1Q9P218 AC093281.2-201ENST00000510153 597 ntBASIC4.98□□□□□ -1.61
COL20A1Q9P218 AC008958.1-201ENST00000511047 682 ntBASIC4.98□□□□□ -1.61
COL20A1Q9P218 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.98□□□□□ -1.61
COL20A1Q9P218 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
COL20A1Q9P218 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
COL20A1Q9P218 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC4.98□□□□□ -1.61
COL20A1Q9P218 SNORA31.9-201ENST00000516429 84 ntBASIC4.98□□□□□ -1.61
COL20A1Q9P218 TOMM20P2-201ENST00000540082 421 ntBASIC4.98□□□□□ -1.61
COL20A1Q9P218 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.98□□□□□ -1.61
COL20A1Q9P218 MIR3160-1-201ENST00000577972 85 ntBASIC4.98□□□□□ -1.61
COL20A1Q9P218 AC006272.2-201ENST00000594725 163 ntBASIC4.98□□□□□ -1.61
COL20A1Q9P218 IPO5P1-202ENST00000600039 287 ntBASIC4.98□□□□□ -1.61
COL20A1Q9P218 AC067959.1-201ENST00000604334 379 ntBASIC4.98□□□□□ -1.61
COL20A1Q9P218 AC072039.2-201ENST00000608883 439 ntBASIC4.98□□□□□ -1.61
COL20A1Q9P218 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC4.98□□□□□ -1.61
COL20A1Q9P218 AC007546.1-201ENST00000619452 559 ntBASIC4.98□□□□□ -1.61
COL20A1Q9P218 AC092650.2-201ENST00000619984 902 ntBASIC4.98□□□□□ -1.61
COL20A1Q9P218 AC091931.1-201ENST00000623488 728 ntBASIC4.98□□□□□ -1.61
COL20A1Q9P218 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms