Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 RNY4P37-201ENST00000516225 96 ntBASIC5.55□□□□□ -1.52
BCAS3Q9H6U6 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.55□□□□□ -1.52
BCAS3Q9H6U6 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
BCAS3Q9H6U6 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC5.55□□□□□ -1.52
BCAS3Q9H6U6 AP006289.1-201ENST00000538089 277 ntBASIC5.55□□□□□ -1.52
BCAS3Q9H6U6 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.55□□□□□ -1.52
BCAS3Q9H6U6 AL157687.1-201ENST00000554853 619 ntBASIC5.55□□□□□ -1.52
BCAS3Q9H6U6 CENPUP2-201ENST00000555897 1186 ntBASIC5.55□□□□□ -1.52
BCAS3Q9H6U6 TRAV15-201ENST00000556680 249 ntBASIC5.55□□□□□ -1.52
BCAS3Q9H6U6 MIR3667-201ENST00000581025 74 ntBASIC5.55□□□□□ -1.52
BCAS3Q9H6U6 MIR4270-201ENST00000581799 70 ntBASIC5.55□□□□□ -1.52
BCAS3Q9H6U6 RN7SL52P-201ENST00000584271 284 ntBASIC5.55□□□□□ -1.52
BCAS3Q9H6U6 AC008752.3-201ENST00000588113 712 ntBASIC5.55□□□□□ -1.52
BCAS3Q9H6U6 AC112187.2-201ENST00000604345 283 ntBASIC5.55□□□□□ -1.52
BCAS3Q9H6U6 AC008277.2-201ENST00000605196 797 ntBASIC5.55□□□□□ -1.52
BCAS3Q9H6U6 AP001506.1-201ENST00000615444 211 ntBASIC5.55□□□□□ -1.52
BCAS3Q9H6U6 AC027807.2-201ENST00000616099 408 ntBASIC5.55□□□□□ -1.52
BCAS3Q9H6U6 RN7SL722P-201ENST00000617780 284 ntBASIC5.55□□□□□ -1.52
BCAS3Q9H6U6 RN7SL565P-201ENST00000618246 284 ntBASIC5.55□□□□□ -1.52
BCAS3Q9H6U6 AP000346.3-201ENST00000622821 210 ntBASIC5.55□□□□□ -1.52
BCAS3Q9H6U6 AC079228.1-201ENST00000624774 1049 ntBASIC5.55□□□□□ -1.52
BCAS3Q9H6U6 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.55□□□□□ -1.52
BCAS3Q9H6U6 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC5.55□□□□□ -1.52
BCAS3Q9H6U6 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
BCAS3Q9H6U6 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.55□□□□□ -1.52
BCAS3Q9H6U6 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.55□□□□□ -1.52
BCAS3Q9H6U6 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.55□□□□□ -1.52
BCAS3Q9H6U6 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
BCAS3Q9H6U6 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.55□□□□□ -1.52
BCAS3Q9H6U6 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.55□□□□□ -1.52
BCAS3Q9H6U6 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
BCAS3Q9H6U6 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
BCAS3Q9H6U6 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC5.55□□□□□ -1.52
BCAS3Q9H6U6 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
BCAS3Q9H6U6 TRIM51GP-201ENST00000534741 1350 ntBASIC5.55□□□□□ -1.52
BCAS3Q9H6U6 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
BCAS3Q9H6U6 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
BCAS3Q9H6U6 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
BCAS3Q9H6U6 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
BCAS3Q9H6U6 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
BCAS3Q9H6U6 AL031985.3-201ENST00000565390 2449 ntBASIC5.54□□□□□ -1.52
BCAS3Q9H6U6 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
BCAS3Q9H6U6 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
BCAS3Q9H6U6 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
BCAS3Q9H6U6 AC079741.1-201ENST00000321498 212 ntBASIC5.54□□□□□ -1.52
BCAS3Q9H6U6 AC126755.2-208ENST00000327792 462 ntBASIC5.54□□□□□ -1.52
BCAS3Q9H6U6 AC138969.1-213ENST00000331436 462 ntBASIC5.54□□□□□ -1.52
BCAS3Q9H6U6 Y_RNA.573-201ENST00000384763 105 ntBASIC5.54□□□□□ -1.52
BCAS3Q9H6U6 RPS24P12-201ENST00000402084 394 ntBASIC5.54□□□□□ -1.52
BCAS3Q9H6U6 MTCYBP36-201ENST00000404146 440 ntBASIC5.54□□□□□ -1.52
BCAS3Q9H6U6 Y_RNA.598-201ENST00000410480 95 ntBASIC5.54□□□□□ -1.52
BCAS3Q9H6U6 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC5.54□□□□□ -1.52
BCAS3Q9H6U6 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC5.54□□□□□ -1.52
BCAS3Q9H6U6 RSU1P3-201ENST00000412878 835 ntBASIC5.54□□□□□ -1.52
BCAS3Q9H6U6 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC5.54□□□□□ -1.52
BCAS3Q9H6U6 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.54□□□□□ -1.52
BCAS3Q9H6U6 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5.54□□□□□ -1.52
BCAS3Q9H6U6 AL831737.1-201ENST00000441288 271 ntBASIC5.54□□□□□ -1.52
BCAS3Q9H6U6 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC5.54□□□□□ -1.52
BCAS3Q9H6U6 AC000111.2-201ENST00000448200 210 ntBASIC5.54□□□□□ -1.52
BCAS3Q9H6U6 AL118496.2-201ENST00000448300 230 ntBASIC5.54□□□□□ -1.52
BCAS3Q9H6U6 AURKAPS2-201ENST00000454983 333 ntBASIC5.54□□□□□ -1.52
BCAS3Q9H6U6 AC091180.1-201ENST00000462104 372 ntBASIC5.54□□□□□ -1.52
BCAS3Q9H6U6 AC091564.1-201ENST00000464563 479 ntBASIC5.54□□□□□ -1.52
BCAS3Q9H6U6 RPL5P22-201ENST00000480199 884 ntBASIC5.54□□□□□ -1.52
BCAS3Q9H6U6 RN7SL441P-201ENST00000492388 296 ntBASIC5.54□□□□□ -1.52
BCAS3Q9H6U6 RPL23AP72-201ENST00000492447 435 ntBASIC5.54□□□□□ -1.52
BCAS3Q9H6U6 AC098799.3-201ENST00000506095 438 ntBASIC5.54□□□□□ -1.52
BCAS3Q9H6U6 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC5.54□□□□□ -1.52
BCAS3Q9H6U6 HMGB1P28-201ENST00000507778 552 ntBASIC5.54□□□□□ -1.52
BCAS3Q9H6U6 MTCO1P30-201ENST00000515244 580 ntBASIC5.54□□□□□ -1.52
BCAS3Q9H6U6 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC5.54□□□□□ -1.52
BCAS3Q9H6U6 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.54□□□□□ -1.52
BCAS3Q9H6U6 AC109635.6-201ENST00000525487 1113 ntBASIC5.54□□□□□ -1.52
BCAS3Q9H6U6 AP001893.2-201ENST00000526949 202 ntBASIC5.54□□□□□ -1.52
BCAS3Q9H6U6 SLC2A13P1-201ENST00000531560 322 ntBASIC5.54□□□□□ -1.52
BCAS3Q9H6U6 OR5AN2P-201ENST00000534535 896 ntBASIC5.54□□□□□ -1.52
BCAS3Q9H6U6 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
BCAS3Q9H6U6 DUX4L52-201ENST00000549363 777 ntBASIC5.54□□□□□ -1.52
BCAS3Q9H6U6 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC5.54□□□□□ -1.52
BCAS3Q9H6U6 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC5.54□□□□□ -1.52
BCAS3Q9H6U6 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC5.54□□□□□ -1.52
BCAS3Q9H6U6 AL139286.1-201ENST00000604465 483 ntBASIC5.54□□□□□ -1.52
BCAS3Q9H6U6 AL391358.1-201ENST00000605342 190 ntBASIC5.54□□□□□ -1.52
BCAS3Q9H6U6 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC5.54□□□□□ -1.52
BCAS3Q9H6U6 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.54□□□□□ -1.52
BCAS3Q9H6U6 FER-210ENST00000628534 558 ntTSL 5 BASIC5.54□□□□□ -1.52
BCAS3Q9H6U6 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.54□□□□□ -1.52
BCAS3Q9H6U6 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.54□□□□□ -1.52
BCAS3Q9H6U6 AP001284.1-201ENST00000528393 2118 ntBASIC5.54□□□□□ -1.52
BCAS3Q9H6U6 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.54□□□□□ -1.52
BCAS3Q9H6U6 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.54□□□□□ -1.52
BCAS3Q9H6U6 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.54□□□□□ -1.52
BCAS3Q9H6U6 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
BCAS3Q9H6U6 ZNF37BP-203ENST00000452306 1352 ntBASIC5.54□□□□□ -1.52
BCAS3Q9H6U6 CASC19-280ENST00000642102 1351 ntBASIC5.54□□□□□ -1.52
BCAS3Q9H6U6 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
BCAS3Q9H6U6 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
BCAS3Q9H6U6 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.53□□□□□ -1.52
BCAS3Q9H6U6 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms