Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC091167.4-201ENST00000605079 184 ntBASIC3.68□□□□□ -1.82
TRIM4Q9C037 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
TRIM4Q9C037 AC243654.2-201ENST00000612843 443 ntBASIC3.68□□□□□ -1.82
TRIM4Q9C037 AC005344.1-201ENST00000613391 459 ntBASIC3.68□□□□□ -1.82
TRIM4Q9C037 AC073530.2-201ENST00000623987 261 ntBASIC3.68□□□□□ -1.82
TRIM4Q9C037 CR392039.4-201ENST00000624968 501 ntBASIC3.68□□□□□ -1.82
TRIM4Q9C037 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.68□□□□□ -1.82
TRIM4Q9C037 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
TRIM4Q9C037 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
TRIM4Q9C037 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.68□□□□□ -1.82
TRIM4Q9C037 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
TRIM4Q9C037 AL513302.2-201ENST00000562313 1842 ntBASIC3.67□□□□□ -1.82
TRIM4Q9C037 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TRIM4Q9C037 AC004944.1-201ENST00000517807 3059 ntBASIC3.67□□□□□ -1.82
TRIM4Q9C037 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
TRIM4Q9C037 RNU4-7P-201ENST00000364758 141 ntBASIC3.67□□□□□ -1.82
TRIM4Q9C037 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
TRIM4Q9C037 AC096644.3-201ENST00000416788 338 ntBASIC3.67□□□□□ -1.82
TRIM4Q9C037 RPL7P44-201ENST00000424827 742 ntBASIC3.67□□□□□ -1.82
TRIM4Q9C037 AC244033.1-201ENST00000426826 870 ntBASIC3.67□□□□□ -1.82
TRIM4Q9C037 AL390879.2-203ENST00000426943 1121 ntBASIC3.67□□□□□ -1.82
TRIM4Q9C037 HIGD1AP4-201ENST00000430194 280 ntBASIC3.67□□□□□ -1.82
TRIM4Q9C037 Z74696.2-201ENST00000436514 498 ntBASIC3.67□□□□□ -1.82
TRIM4Q9C037 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
TRIM4Q9C037 AC092013.1-201ENST00000438795 332 ntBASIC3.67□□□□□ -1.82
TRIM4Q9C037 RANP8-201ENST00000444720 713 ntBASIC3.67□□□□□ -1.82
TRIM4Q9C037 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.67□□□□□ -1.82
TRIM4Q9C037 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.67□□□□□ -1.82
TRIM4Q9C037 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.67□□□□□ -1.82
TRIM4Q9C037 RN7SL442P-201ENST00000473804 320 ntBASIC3.67□□□□□ -1.82
TRIM4Q9C037 AC017015.1-201ENST00000477387 286 ntBASIC3.67□□□□□ -1.82
TRIM4Q9C037 RPL7P23-201ENST00000493874 747 ntBASIC3.67□□□□□ -1.82
TRIM4Q9C037 AC012170.1-201ENST00000495139 359 ntBASIC3.67□□□□□ -1.82
TRIM4Q9C037 MTCO1P30-201ENST00000515244 580 ntBASIC3.67□□□□□ -1.82
TRIM4Q9C037 RNA5SP179-201ENST00000517284 121 ntBASIC3.67□□□□□ -1.82
TRIM4Q9C037 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.67□□□□□ -1.82
TRIM4Q9C037 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC3.67□□□□□ -1.82
TRIM4Q9C037 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.67□□□□□ -1.82
TRIM4Q9C037 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.67□□□□□ -1.82
TRIM4Q9C037 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.67□□□□□ -1.82
TRIM4Q9C037 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.67□□□□□ -1.82
TRIM4Q9C037 AL137843.1-201ENST00000605078 385 ntBASIC3.67□□□□□ -1.82
TRIM4Q9C037 AC116312.1-201ENST00000606841 314 ntBASIC3.67□□□□□ -1.82
TRIM4Q9C037 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.67□□□□□ -1.82
TRIM4Q9C037 AC009318.3-201ENST00000616916 503 ntBASIC3.67□□□□□ -1.82
TRIM4Q9C037 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TRIM4Q9C037 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TRIM4Q9C037 AC079684.1-201ENST00000621405 437 ntBASIC3.67□□□□□ -1.82
TRIM4Q9C037 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC3.67□□□□□ -1.82
TRIM4Q9C037 AC118273.1-201ENST00000525324 3006 ntBASIC3.67□□□□□ -1.82
TRIM4Q9C037 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TRIM4Q9C037 OR10AB1P-202ENST00000641219 1686 ntBASIC3.66□□□□□ -1.82
TRIM4Q9C037 AC233263.6-201ENST00000631132 1963 ntBASIC3.66□□□□□ -1.82
TRIM4Q9C037 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TRIM4Q9C037 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TRIM4Q9C037 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.66□□□□□ -1.82
TRIM4Q9C037 RNA5SP167-201ENST00000365461 116 ntBASIC3.66□□□□□ -1.82
TRIM4Q9C037 MIR199A2-201ENST00000385289 110 ntBASIC3.66□□□□□ -1.82
TRIM4Q9C037 SNORA48.8-201ENST00000391324 134 ntBASIC3.66□□□□□ -1.82
TRIM4Q9C037 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC3.66□□□□□ -1.82
TRIM4Q9C037 UBE2V2P1-201ENST00000434717 398 ntBASIC3.66□□□□□ -1.82
TRIM4Q9C037 RPS4XP10-201ENST00000465034 731 ntBASIC3.66□□□□□ -1.82
TRIM4Q9C037 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.66□□□□□ -1.82
TRIM4Q9C037 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.66□□□□□ -1.82
TRIM4Q9C037 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC3.66□□□□□ -1.82
TRIM4Q9C037 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.66□□□□□ -1.82
TRIM4Q9C037 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.66□□□□□ -1.82
TRIM4Q9C037 AC006518.1-201ENST00000541449 943 ntBASIC3.66□□□□□ -1.82
TRIM4Q9C037 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.66□□□□□ -1.82
TRIM4Q9C037 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.66□□□□□ -1.82
TRIM4Q9C037 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.66□□□□□ -1.82
TRIM4Q9C037 ATE1-AS1-202ENST00000636460 506 ntBASIC3.66□□□□□ -1.82
TRIM4Q9C037 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TRIM4Q9C037 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TRIM4Q9C037 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.66□□□□□ -1.82
TRIM4Q9C037 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.65□□□□□ -1.82
TRIM4Q9C037 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
TRIM4Q9C037 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
TRIM4Q9C037 AL672296.1-201ENST00000427780 2158 ntBASIC3.65□□□□□ -1.82
TRIM4Q9C037 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
TRIM4Q9C037 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
TRIM4Q9C037 U3.26-201ENST00000391236 204 ntBASIC3.65□□□□□ -1.83
TRIM4Q9C037 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.65□□□□□ -1.83
TRIM4Q9C037 VN1R51P-201ENST00000411675 945 ntBASIC3.65□□□□□ -1.83
TRIM4Q9C037 MTCO1P52-201ENST00000433928 531 ntBASIC3.65□□□□□ -1.83
TRIM4Q9C037 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.65□□□□□ -1.83
TRIM4Q9C037 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.65□□□□□ -1.83
TRIM4Q9C037 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.65□□□□□ -1.83
TRIM4Q9C037 AC010401.1-201ENST00000463867 348 ntBASIC3.65□□□□□ -1.83
TRIM4Q9C037 RPS20P21-201ENST00000466859 343 ntBASIC3.65□□□□□ -1.83
TRIM4Q9C037 AC087312.1-201ENST00000471411 480 ntBASIC3.65□□□□□ -1.83
TRIM4Q9C037 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
TRIM4Q9C037 RPS27AP1-201ENST00000475545 471 ntBASIC3.65□□□□□ -1.83
TRIM4Q9C037 AC084198.1-201ENST00000477747 402 ntBASIC3.65□□□□□ -1.83
TRIM4Q9C037 PRELID3BP6-201ENST00000503839 571 ntBASIC3.65□□□□□ -1.83
TRIM4Q9C037 AC111000.5-201ENST00000506559 1178 ntBASIC3.65□□□□□ -1.83
TRIM4Q9C037 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC3.65□□□□□ -1.83
TRIM4Q9C037 IGHVIII-38-1-201ENST00000521454 282 ntBASIC3.65□□□□□ -1.83
TRIM4Q9C037 SMARCE1P4-201ENST00000523647 241 ntBASIC3.65□□□□□ -1.83
TRIM4Q9C037 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms