Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL25A1Q9BXS0 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL25A1Q9BXS0 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL25A1Q9BXS0 ARHGAP42P1-201ENST00000507474 1976 ntBASIC6.2□□□□□ -1.42
COL25A1Q9BXS0 AC025809.2-201ENST00000625085 1802 ntBASIC6.2□□□□□ -1.42
COL25A1Q9BXS0 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
COL25A1Q9BXS0 POU2F3-201ENST00000260264 2903 ntTSL 2 BASIC6.2□□□□□ -1.42
COL25A1Q9BXS0 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
COL25A1Q9BXS0 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
COL25A1Q9BXS0 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
COL25A1Q9BXS0 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC6.2□□□□□ -1.42
COL25A1Q9BXS0 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL25A1Q9BXS0 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL25A1Q9BXS0 AL139276.1-201ENST00000311910 1001 ntBASIC6.2□□□□□ -1.42
COL25A1Q9BXS0 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
COL25A1Q9BXS0 RNA5SP65-201ENST00000363166 119 ntBASIC6.2□□□□□ -1.42
COL25A1Q9BXS0 HMGB1P17-201ENST00000403495 628 ntBASIC6.2□□□□□ -1.42
COL25A1Q9BXS0 RNU4-25P-201ENST00000410569 230 ntBASIC6.2□□□□□ -1.42
COL25A1Q9BXS0 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC6.2□□□□□ -1.42
COL25A1Q9BXS0 RPS20P5-201ENST00000434808 360 ntBASIC6.2□□□□□ -1.42
COL25A1Q9BXS0 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC6.2□□□□□ -1.42
COL25A1Q9BXS0 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC6.2□□□□□ -1.42
COL25A1Q9BXS0 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC6.2□□□□□ -1.42
COL25A1Q9BXS0 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC6.2□□□□□ -1.42
COL25A1Q9BXS0 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC6.2□□□□□ -1.42
COL25A1Q9BXS0 AC112492.4-201ENST00000456549 352 ntBASIC6.2□□□□□ -1.42
COL25A1Q9BXS0 HNRNPDLP3-201ENST00000456745 380 ntBASIC6.2□□□□□ -1.42
COL25A1Q9BXS0 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.2□□□□□ -1.42
COL25A1Q9BXS0 BX284632.1-201ENST00000478218 541 ntBASIC6.2□□□□□ -1.42
COL25A1Q9BXS0 IGLV2-34-201ENST00000490007 283 ntBASIC6.2□□□□□ -1.42
COL25A1Q9BXS0 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC6.2□□□□□ -1.42
COL25A1Q9BXS0 RNA5SP337-201ENST00000517007 109 ntBASIC6.2□□□□□ -1.42
COL25A1Q9BXS0 AC090136.1-201ENST00000520009 240 ntBASIC6.2□□□□□ -1.42
COL25A1Q9BXS0 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.2□□□□□ -1.42
COL25A1Q9BXS0 AP000763.2-201ENST00000540641 163 ntBASIC6.2□□□□□ -1.42
COL25A1Q9BXS0 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC6.2□□□□□ -1.42
COL25A1Q9BXS0 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC6.2□□□□□ -1.42
COL25A1Q9BXS0 MIR5186-201ENST00000577504 120 ntBASIC6.2□□□□□ -1.42
COL25A1Q9BXS0 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC6.2□□□□□ -1.42
COL25A1Q9BXS0 AC104662.1-201ENST00000604448 511 ntBASIC6.2□□□□□ -1.42
COL25A1Q9BXS0 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC6.2□□□□□ -1.42
COL25A1Q9BXS0 SNORD58B-201ENST00000607313 66 ntBASIC6.2□□□□□ -1.42
COL25A1Q9BXS0 Z82243.1-201ENST00000609432 473 ntBASIC6.2□□□□□ -1.42
COL25A1Q9BXS0 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC6.2□□□□□ -1.42
COL25A1Q9BXS0 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC6.2□□□□□ -1.42
COL25A1Q9BXS0 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.2□□□□□ -1.42
COL25A1Q9BXS0 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
COL25A1Q9BXS0 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.2□□□□□ -1.42
COL25A1Q9BXS0 LINC01204-203ENST00000609127 2900 ntTSL 2 BASIC6.2□□□□□ -1.42
COL25A1Q9BXS0 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC6.2□□□□□ -1.42
COL25A1Q9BXS0 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL25A1Q9BXS0 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL25A1Q9BXS0 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
COL25A1Q9BXS0 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL25A1Q9BXS0 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL25A1Q9BXS0 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC6.2□□□□□ -1.42
COL25A1Q9BXS0 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL25A1Q9BXS0 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL25A1Q9BXS0 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.2□□□□□ -1.42
COL25A1Q9BXS0 AL662795.2-201ENST00000624252 3706 ntBASIC6.2□□□□□ -1.42
COL25A1Q9BXS0 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 AC012213.2-201ENST00000562917 4597 ntBASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 NACA-203ENST00000454682 6629 ntTSL 5 BASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 RNU6-545P-201ENST00000362681 104 ntBASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 RNU6-1027P-201ENST00000383998 107 ntBASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 Y_RNA.518-201ENST00000384552 113 ntBASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 ARF4P3-201ENST00000397387 509 ntBASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 RPL7P60-201ENST00000397636 735 ntBASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 DSTNP4-201ENST00000399472 474 ntBASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 RNU6ATAC18P-201ENST00000408413 101 ntBASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 GSTM3P2-201ENST00000412746 530 ntBASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 BX323014.1-201ENST00000412876 237 ntBASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 RNU7-180P-201ENST00000459240 63 ntBASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 AC015724.1-201ENST00000478577 156 ntBASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 AC022215.1-201ENST00000481770 362 ntBASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 AC026979.1-201ENST00000492525 396 ntBASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 Y_RNA.654-201ENST00000497848 106 ntBASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 HMGN1P9-201ENST00000515212 298 ntBASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 RNU4-77P-201ENST00000516692 156 ntBASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 RPL21P7-201ENST00000557463 483 ntBASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 AC130289.1-201ENST00000577321 73 ntBASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 AC104763.2-201ENST00000604179 382 ntBASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC6.19□□□□□ -1.42
COL25A1Q9BXS0 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms