Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.58□□□□□ -1.68
USP47Q96K76 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.58□□□□□ -1.68
USP47Q96K76 AL365503.1-201ENST00000605247 905 ntBASIC4.58□□□□□ -1.68
USP47Q96K76 AC004241.3-201ENST00000611728 517 ntBASIC4.58□□□□□ -1.68
USP47Q96K76 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
USP47Q96K76 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
USP47Q96K76 RNU6-1279P-201ENST00000383917 103 ntBASIC4.57□□□□□ -1.68
USP47Q96K76 TAF9BP1-201ENST00000396646 746 ntBASIC4.57□□□□□ -1.68
USP47Q96K76 RPL5P19-201ENST00000404228 893 ntBASIC4.57□□□□□ -1.68
USP47Q96K76 OR6K4P-201ENST00000423179 955 ntBASIC4.57□□□□□ -1.68
USP47Q96K76 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.57□□□□□ -1.68
USP47Q96K76 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.57□□□□□ -1.68
USP47Q96K76 HMGB3P10-201ENST00000434734 572 ntBASIC4.57□□□□□ -1.68
USP47Q96K76 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.57□□□□□ -1.68
USP47Q96K76 HSPE1P22-201ENST00000456856 327 ntBASIC4.57□□□□□ -1.68
USP47Q96K76 RN7SL504P-201ENST00000494496 287 ntBASIC4.57□□□□□ -1.68
USP47Q96K76 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.57□□□□□ -1.68
USP47Q96K76 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC4.57□□□□□ -1.68
USP47Q96K76 CCNHP1-201ENST00000513311 678 ntBASIC4.57□□□□□ -1.68
USP47Q96K76 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.57□□□□□ -1.68
USP47Q96K76 RN7SKP60-201ENST00000516985 239 ntBASIC4.57□□□□□ -1.68
USP47Q96K76 AC090281.1-201ENST00000523019 276 ntBASIC4.57□□□□□ -1.68
USP47Q96K76 FAM106CP-201ENST00000582212 507 ntBASIC4.57□□□□□ -1.68
USP47Q96K76 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.57□□□□□ -1.68
USP47Q96K76 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.57□□□□□ -1.68
USP47Q96K76 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
USP47Q96K76 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
USP47Q96K76 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
USP47Q96K76 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
USP47Q96K76 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
USP47Q96K76 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.57□□□□□ -1.68
USP47Q96K76 AC024341.1-201ENST00000526444 1552 ntBASIC4.56□□□□□ -1.68
USP47Q96K76 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.56□□□□□ -1.68
USP47Q96K76 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.56□□□□□ -1.68
USP47Q96K76 RPL23AP57-201ENST00000332361 466 ntBASIC4.56□□□□□ -1.68
USP47Q96K76 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
USP47Q96K76 Y_RNA.510-201ENST00000384511 114 ntBASIC4.56□□□□□ -1.68
USP47Q96K76 MIR1289-1-201ENST00000408836 144 ntBASIC4.56□□□□□ -1.68
USP47Q96K76 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.56□□□□□ -1.68
USP47Q96K76 UBE2V2P1-201ENST00000434717 398 ntBASIC4.56□□□□□ -1.68
USP47Q96K76 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC4.56□□□□□ -1.68
USP47Q96K76 RPS3AP14-201ENST00000483907 780 ntBASIC4.56□□□□□ -1.68
USP47Q96K76 RNU4ATAC3P-201ENST00000516699 126 ntBASIC4.56□□□□□ -1.68
USP47Q96K76 AC025857.1-201ENST00000525252 377 ntBASIC4.56□□□□□ -1.68
USP47Q96K76 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
USP47Q96K76 IGKV1OR2-6-201ENST00000603485 277 ntBASIC4.56□□□□□ -1.68
USP47Q96K76 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.56□□□□□ -1.68
USP47Q96K76 uc_338.1-201ENST00000612113 180 ntBASIC4.56□□□□□ -1.68
USP47Q96K76 AC105227.2-201ENST00000615075 605 ntBASIC4.56□□□□□ -1.68
USP47Q96K76 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.56□□□□□ -1.68
USP47Q96K76 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
USP47Q96K76 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
USP47Q96K76 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
USP47Q96K76 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
USP47Q96K76 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
USP47Q96K76 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.55□□□□□ -1.68
USP47Q96K76 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
USP47Q96K76 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
USP47Q96K76 RNA5SP105-201ENST00000391123 113 ntBASIC4.55□□□□□ -1.68
USP47Q96K76 AL034403.1-201ENST00000399414 885 ntBASIC4.55□□□□□ -1.68
USP47Q96K76 AL136131.1-201ENST00000406079 803 ntBASIC4.55□□□□□ -1.68
USP47Q96K76 LIPT1P1-201ENST00000415870 1186 ntBASIC4.55□□□□□ -1.68
USP47Q96K76 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.55□□□□□ -1.68
USP47Q96K76 PPIAP17-201ENST00000438507 471 ntBASIC4.55□□□□□ -1.68
USP47Q96K76 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.55□□□□□ -1.68
USP47Q96K76 AC004801.2-202ENST00000463559 283 ntBASIC4.55□□□□□ -1.68
USP47Q96K76 AP000926.3-201ENST00000497201 299 ntBASIC4.55□□□□□ -1.68
USP47Q96K76 AC110794.1-201ENST00000505816 425 ntBASIC4.55□□□□□ -1.68
USP47Q96K76 AL008729.2-201ENST00000606393 473 ntBASIC4.55□□□□□ -1.68
USP47Q96K76 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC4.55□□□□□ -1.68
USP47Q96K76 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
USP47Q96K76 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
USP47Q96K76 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
USP47Q96K76 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
USP47Q96K76 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
USP47Q96K76 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
USP47Q96K76 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
USP47Q96K76 RAC1P3-201ENST00000416129 580 ntBASIC4.54□□□□□ -1.68
USP47Q96K76 RPL7P28-201ENST00000437739 740 ntBASIC4.54□□□□□ -1.68
USP47Q96K76 HMGB3P11-201ENST00000440127 604 ntBASIC4.54□□□□□ -1.68
USP47Q96K76 Z99127.3-201ENST00000448158 395 ntBASIC4.54□□□□□ -1.68
USP47Q96K76 AP001992.1-205ENST00000462248 379 ntBASIC4.54□□□□□ -1.68
USP47Q96K76 AC109925.1-201ENST00000478069 331 ntBASIC4.54□□□□□ -1.68
USP47Q96K76 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.54□□□□□ -1.68
USP47Q96K76 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC4.54□□□□□ -1.68
USP47Q96K76 MIR5004-201ENST00000579078 107 ntBASIC4.54□□□□□ -1.68
USP47Q96K76 uc_338.25-201ENST00000613756 156 ntBASIC4.54□□□□□ -1.68
USP47Q96K76 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
USP47Q96K76 AC007496.3-201ENST00000624987 3443 ntBASIC4.54□□□□□ -1.68
USP47Q96K76 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
USP47Q96K76 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
USP47Q96K76 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
USP47Q96K76 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.53□□□□□ -1.68
USP47Q96K76 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC4.53□□□□□ -1.68
USP47Q96K76 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.53□□□□□ -1.68
USP47Q96K76 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.53□□□□□ -1.68
USP47Q96K76 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.53□□□□□ -1.68
USP47Q96K76 SEPT7P6-201ENST00000469999 1143 ntBASIC4.53□□□□□ -1.68
USP47Q96K76 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.53□□□□□ -1.68
USP47Q96K76 VWA8P1-201ENST00000510889 176 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms