Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 RPS4XP8-201ENST00000402039 771 ntBASIC9.67□□□□□ -0.86
TRIM41Q8WV44 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC9.67□□□□□ -0.86
TRIM41Q8WV44 OR10T1P-201ENST00000424327 947 ntBASIC9.67□□□□□ -0.86
TRIM41Q8WV44 AL358176.2-201ENST00000425769 204 ntBASIC9.67□□□□□ -0.86
TRIM41Q8WV44 AC068287.1-201ENST00000430283 295 ntBASIC9.67□□□□□ -0.86
TRIM41Q8WV44 USP24P1-201ENST00000433802 779 ntBASIC9.67□□□□□ -0.86
TRIM41Q8WV44 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC9.67□□□□□ -0.86
TRIM41Q8WV44 SNRPEP7-201ENST00000438350 220 ntBASIC9.67□□□□□ -0.86
TRIM41Q8WV44 Z98949.2-201ENST00000440996 144 ntBASIC9.67□□□□□ -0.86
TRIM41Q8WV44 NDUFA5P7-201ENST00000452914 242 ntBASIC9.67□□□□□ -0.86
TRIM41Q8WV44 NUTF2P7-201ENST00000453086 375 ntBASIC9.67□□□□□ -0.86
TRIM41Q8WV44 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC9.67□□□□□ -0.86
TRIM41Q8WV44 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC9.67□□□□□ -0.86
TRIM41Q8WV44 RNU4-49P-201ENST00000516080 140 ntBASIC9.67□□□□□ -0.86
TRIM41Q8WV44 RNU6-123P-201ENST00000516163 102 ntBASIC9.67□□□□□ -0.86
TRIM41Q8WV44 OR8A2P-201ENST00000528631 952 ntBASIC9.67□□□□□ -0.86
TRIM41Q8WV44 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC9.67□□□□□ -0.86
TRIM41Q8WV44 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC9.67□□□□□ -0.86
TRIM41Q8WV44 FRG2DP-202ENST00000566967 323 ntBASIC9.67□□□□□ -0.86
TRIM41Q8WV44 AC006115.2-201ENST00000596823 202 ntBASIC9.67□□□□□ -0.86
TRIM41Q8WV44 XIAPP1-201ENST00000603162 600 ntBASIC9.67□□□□□ -0.86
TRIM41Q8WV44 AC010591.1-201ENST00000603941 649 ntBASIC9.67□□□□□ -0.86
TRIM41Q8WV44 AL590392.1-201ENST00000604960 446 ntBASIC9.67□□□□□ -0.86
TRIM41Q8WV44 AC008966.2-201ENST00000606157 453 ntBASIC9.67□□□□□ -0.86
TRIM41Q8WV44 AC078899.5-201ENST00000612475 178 ntBASIC9.67□□□□□ -0.86
TRIM41Q8WV44 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
TRIM41Q8WV44 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
TRIM41Q8WV44 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC9.67□□□□□ -0.86
TRIM41Q8WV44 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
TRIM41Q8WV44 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
TRIM41Q8WV44 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
TRIM41Q8WV44 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC9.66□□□□□ -0.86
TRIM41Q8WV44 AC093909.5-201ENST00000621839 1799 ntBASIC9.66□□□□□ -0.86
TRIM41Q8WV44 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
TRIM41Q8WV44 MGP-201ENST00000228938 694 ntTSL 3 BASIC9.66□□□□□ -0.86
TRIM41Q8WV44 RNA5SP131-201ENST00000365452 119 ntBASIC9.66□□□□□ -0.86
TRIM41Q8WV44 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC9.66□□□□□ -0.86
TRIM41Q8WV44 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
TRIM41Q8WV44 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
TRIM41Q8WV44 RNU6ATAC7P-201ENST00000408111 127 ntBASIC9.66□□□□□ -0.86
TRIM41Q8WV44 AL591848.1-201ENST00000413092 322 ntBASIC9.66□□□□□ -0.86
TRIM41Q8WV44 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC9.66□□□□□ -0.86
TRIM41Q8WV44 BEND7P1-201ENST00000422058 457 ntBASIC9.66□□□□□ -0.86
TRIM41Q8WV44 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC9.66□□□□□ -0.86
TRIM41Q8WV44 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC9.66□□□□□ -0.86
TRIM41Q8WV44 AC004975.1-201ENST00000428733 208 ntBASIC9.66□□□□□ -0.86
TRIM41Q8WV44 ARL2BPP10-201ENST00000446487 531 ntBASIC9.66□□□□□ -0.86
TRIM41Q8WV44 AL035090.1-201ENST00000454835 332 ntBASIC9.66□□□□□ -0.86
TRIM41Q8WV44 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC9.66□□□□□ -0.86
TRIM41Q8WV44 PPP1R2P5-201ENST00000457256 603 ntBASIC9.66□□□□□ -0.86
TRIM41Q8WV44 MTCO2P29-201ENST00000465212 189 ntBASIC9.66□□□□□ -0.86
TRIM41Q8WV44 AC074255.1-201ENST00000511259 501 ntBASIC9.66□□□□□ -0.86
TRIM41Q8WV44 NPM1P41-201ENST00000512920 831 ntBASIC9.66□□□□□ -0.86
TRIM41Q8WV44 Y_RNA.691-201ENST00000516611 103 ntBASIC9.66□□□□□ -0.86
TRIM41Q8WV44 Y_RNA.720-201ENST00000517166 92 ntBASIC9.66□□□□□ -0.86
TRIM41Q8WV44 RN7SKP256-201ENST00000517201 314 ntBASIC9.66□□□□□ -0.86
TRIM41Q8WV44 PSMA2P1-201ENST00000526365 646 ntBASIC9.66□□□□□ -0.86
TRIM41Q8WV44 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC9.66□□□□□ -0.86
TRIM41Q8WV44 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC9.66□□□□□ -0.86
TRIM41Q8WV44 DCN-210ENST00000547568 823 ntTSL 3 BASIC9.66□□□□□ -0.86
TRIM41Q8WV44 AC126615.2-201ENST00000553003 515 ntBASIC9.66□□□□□ -0.86
TRIM41Q8WV44 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC9.66□□□□□ -0.86
TRIM41Q8WV44 BCRP9-201ENST00000605312 388 ntBASIC9.66□□□□□ -0.86
TRIM41Q8WV44 AC084781.2-201ENST00000615568 161 ntBASIC9.66□□□□□ -0.86
TRIM41Q8WV44 AC091925.1-201ENST00000623204 462 ntBASIC9.66□□□□□ -0.86
TRIM41Q8WV44 AC015908.5-201ENST00000623289 343 ntBASIC9.66□□□□□ -0.86
TRIM41Q8WV44 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC9.66□□□□□ -0.86
TRIM41Q8WV44 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
TRIM41Q8WV44 AC068769.1-201ENST00000474767 2426 ntBASIC9.66□□□□□ -0.86
TRIM41Q8WV44 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
TRIM41Q8WV44 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
TRIM41Q8WV44 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC9.65□□□□□ -0.86
TRIM41Q8WV44 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
TRIM41Q8WV44 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
TRIM41Q8WV44 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
TRIM41Q8WV44 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC9.65□□□□□ -0.86
TRIM41Q8WV44 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC9.65□□□□□ -0.86
TRIM41Q8WV44 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
TRIM41Q8WV44 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC9.65□□□□□ -0.86
TRIM41Q8WV44 CD86-204ENST00000469710 1604 ntTSL 2 BASIC9.65□□□□□ -0.86
TRIM41Q8WV44 ATP5A1P4-201ENST00000556888 1605 ntBASIC9.65□□□□□ -0.86
TRIM41Q8WV44 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
TRIM41Q8WV44 MIR130A-201ENST00000385274 89 ntBASIC9.65□□□□□ -0.86
TRIM41Q8WV44 MIR1305-201ENST00000408300 86 ntBASIC9.65□□□□□ -0.86
TRIM41Q8WV44 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC9.65□□□□□ -0.86
TRIM41Q8WV44 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC9.65□□□□□ -0.86
TRIM41Q8WV44 AL672138.1-201ENST00000450604 1015 ntBASIC9.65□□□□□ -0.86
TRIM41Q8WV44 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC9.65□□□□□ -0.86
TRIM41Q8WV44 AC138409.2-202ENST00000507274 458 ntBASIC9.65□□□□□ -0.86
TRIM41Q8WV44 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC9.65□□□□□ -0.86
TRIM41Q8WV44 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC9.65□□□□□ -0.86
TRIM41Q8WV44 MIR4429-201ENST00000580105 73 ntBASIC9.65□□□□□ -0.86
TRIM41Q8WV44 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC9.65□□□□□ -0.86
TRIM41Q8WV44 AC103710.3-201ENST00000608157 948 ntBASIC9.65□□□□□ -0.86
TRIM41Q8WV44 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
TRIM41Q8WV44 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
TRIM41Q8WV44 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC9.65□□□□□ -0.86
TRIM41Q8WV44 MTCO1P12-201ENST00000414273 1543 ntBASIC9.65□□□□□ -0.86
TRIM41Q8WV44 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
TRIM41Q8WV44 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC9.65□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 841.4 ms