Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 AC091178.1-203ENST00000584586 279 ntBASIC5.41□□□□□ -1.54
SYNE4Q8N205 AC022146.1-201ENST00000595307 847 ntBASIC5.41□□□□□ -1.54
SYNE4Q8N205 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC5.41□□□□□ -1.54
SYNE4Q8N205 AF131215.7-201ENST00000602443 707 ntBASIC5.41□□□□□ -1.54
SYNE4Q8N205 AL136363.2-201ENST00000604173 851 ntBASIC5.41□□□□□ -1.54
SYNE4Q8N205 FRG1HP-204ENST00000617940 757 ntBASIC5.41□□□□□ -1.54
SYNE4Q8N205 AC009509.4-201ENST00000619202 509 ntBASIC5.41□□□□□ -1.54
SYNE4Q8N205 AC009878.1-201ENST00000621819 340 ntBASIC5.41□□□□□ -1.54
SYNE4Q8N205 OR1S1-201ENST00000624470 978 ntBASIC5.41□□□□□ -1.54
SYNE4Q8N205 CDRT1-208ENST00000630868 794 ntBASIC5.41□□□□□ -1.54
SYNE4Q8N205 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC5.41□□□□□ -1.54
SYNE4Q8N205 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
SYNE4Q8N205 AC010266.2-201ENST00000564741 3255 ntBASIC5.41□□□□□ -1.54
SYNE4Q8N205 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.41□□□□□ -1.54
SYNE4Q8N205 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
SYNE4Q8N205 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SYNE4Q8N205 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SYNE4Q8N205 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SYNE4Q8N205 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
SYNE4Q8N205 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SYNE4Q8N205 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
SYNE4Q8N205 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
SYNE4Q8N205 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC5.4□□□□□ -1.54
SYNE4Q8N205 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SYNE4Q8N205 RNU6-353P-201ENST00000364266 108 ntBASIC5.4□□□□□ -1.54
SYNE4Q8N205 MT-TH-201ENST00000387441 69 ntBASIC5.4□□□□□ -1.54
SYNE4Q8N205 EI24P3-201ENST00000399046 1062 ntBASIC5.4□□□□□ -1.54
SYNE4Q8N205 HMGB3P18-201ENST00000406327 590 ntBASIC5.4□□□□□ -1.54
SYNE4Q8N205 RN7SKP33-201ENST00000410942 340 ntBASIC5.4□□□□□ -1.54
SYNE4Q8N205 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC5.4□□□□□ -1.54
SYNE4Q8N205 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC5.4□□□□□ -1.54
SYNE4Q8N205 COX6B1P7-201ENST00000430845 235 ntBASIC5.4□□□□□ -1.54
SYNE4Q8N205 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.4□□□□□ -1.54
SYNE4Q8N205 AL354941.1-201ENST00000438600 464 ntBASIC5.4□□□□□ -1.54
SYNE4Q8N205 RPL7L1P8-201ENST00000469911 741 ntBASIC5.4□□□□□ -1.54
SYNE4Q8N205 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
SYNE4Q8N205 SETP11-201ENST00000473027 690 ntBASIC5.4□□□□□ -1.54
SYNE4Q8N205 AC091959.2-201ENST00000477363 321 ntBASIC5.4□□□□□ -1.54
SYNE4Q8N205 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SYNE4Q8N205 AC104090.1-201ENST00000506341 1171 ntBASIC5.4□□□□□ -1.54
SYNE4Q8N205 AC005178.1-201ENST00000508392 440 ntBASIC5.4□□□□□ -1.54
SYNE4Q8N205 AC008565.1-201ENST00000509046 885 ntBASIC5.4□□□□□ -1.54
SYNE4Q8N205 AC091965.2-201ENST00000512324 613 ntBASIC5.4□□□□□ -1.54
SYNE4Q8N205 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.4□□□□□ -1.54
SYNE4Q8N205 HIGD1AP10-201ENST00000527837 282 ntBASIC5.4□□□□□ -1.54
SYNE4Q8N205 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.4□□□□□ -1.54
SYNE4Q8N205 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC5.4□□□□□ -1.54
SYNE4Q8N205 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.4□□□□□ -1.54
SYNE4Q8N205 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC5.4□□□□□ -1.54
SYNE4Q8N205 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC5.4□□□□□ -1.54
SYNE4Q8N205 AC068135.2-201ENST00000569293 1028 ntBASIC5.4□□□□□ -1.54
SYNE4Q8N205 EIF1P4-201ENST00000572664 335 ntBASIC5.4□□□□□ -1.54
SYNE4Q8N205 MIR3944-201ENST00000581277 108 ntBASIC5.4□□□□□ -1.54
SYNE4Q8N205 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC5.4□□□□□ -1.54
SYNE4Q8N205 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.4□□□□□ -1.54
SYNE4Q8N205 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.4□□□□□ -1.54
SYNE4Q8N205 BNIP3P11-201ENST00000603878 563 ntBASIC5.4□□□□□ -1.54
SYNE4Q8N205 AL161756.2-201ENST00000604597 246 ntBASIC5.4□□□□□ -1.54
SYNE4Q8N205 AC096553.1-201ENST00000605169 829 ntBASIC5.4□□□□□ -1.54
SYNE4Q8N205 AC006270.3-201ENST00000605967 1036 ntBASIC5.4□□□□□ -1.54
SYNE4Q8N205 AC244258.1-201ENST00000637553 1071 ntBASIC5.4□□□□□ -1.54
SYNE4Q8N205 AC008013.2-202ENST00000637965 364 ntBASIC5.4□□□□□ -1.54
SYNE4Q8N205 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC5.4□□□□□ -1.55
SYNE4Q8N205 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SYNE4Q8N205 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
SYNE4Q8N205 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SYNE4Q8N205 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SYNE4Q8N205 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.4□□□□□ -1.55
SYNE4Q8N205 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SYNE4Q8N205 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
SYNE4Q8N205 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SYNE4Q8N205 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
SYNE4Q8N205 AC027228.2-201ENST00000567141 2154 ntBASIC5.39□□□□□ -1.55
SYNE4Q8N205 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SYNE4Q8N205 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SYNE4Q8N205 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.39□□□□□ -1.55
SYNE4Q8N205 Y_RNA.359-201ENST00000365498 102 ntBASIC5.39□□□□□ -1.55
SYNE4Q8N205 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SYNE4Q8N205 RNU6-532P-201ENST00000384318 107 ntBASIC5.39□□□□□ -1.55
SYNE4Q8N205 DEFB108C-201ENST00000400154 252 ntBASIC5.39□□□□□ -1.55
SYNE4Q8N205 CRYBB2P1-203ENST00000415709 538 ntBASIC5.39□□□□□ -1.55
SYNE4Q8N205 AC008280.1-201ENST00000418851 412 ntBASIC5.39□□□□□ -1.55
SYNE4Q8N205 AC027644.1-201ENST00000419595 298 ntBASIC5.39□□□□□ -1.55
SYNE4Q8N205 MTCO1P52-201ENST00000433928 531 ntBASIC5.39□□□□□ -1.55
SYNE4Q8N205 AL591503.2-201ENST00000442314 1005 ntBASIC5.39□□□□□ -1.55
SYNE4Q8N205 AL050341.1-201ENST00000447743 313 ntBASIC5.39□□□□□ -1.55
SYNE4Q8N205 MTCYBP1-201ENST00000454315 1119 ntBASIC5.39□□□□□ -1.55
SYNE4Q8N205 RPS6P4-201ENST00000494693 758 ntBASIC5.39□□□□□ -1.55
SYNE4Q8N205 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.39□□□□□ -1.55
SYNE4Q8N205 AC006499.6-201ENST00000511169 607 ntBASIC5.39□□□□□ -1.55
SYNE4Q8N205 HMGB3P13-201ENST00000511263 607 ntBASIC5.39□□□□□ -1.55
SYNE4Q8N205 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC5.39□□□□□ -1.55
SYNE4Q8N205 AC026726.1-201ENST00000512859 601 ntBASIC5.39□□□□□ -1.55
SYNE4Q8N205 NPM1P41-201ENST00000512920 831 ntBASIC5.39□□□□□ -1.55
SYNE4Q8N205 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC5.39□□□□□ -1.55
SYNE4Q8N205 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC5.39□□□□□ -1.55
SYNE4Q8N205 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.39□□□□□ -1.55
SYNE4Q8N205 OR5G4P-201ENST00000525251 760 ntBASIC5.39□□□□□ -1.55
SYNE4Q8N205 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.39□□□□□ -1.55
SYNE4Q8N205 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms