Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 MTND1P1-201ENST00000445453 368 ntBASIC5□□□□□ -1.61
SLC44A4Q53GD3 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5□□□□□ -1.61
SLC44A4Q53GD3 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC5□□□□□ -1.61
SLC44A4Q53GD3 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC5□□□□□ -1.61
SLC44A4Q53GD3 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC5□□□□□ -1.61
SLC44A4Q53GD3 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5□□□□□ -1.61
SLC44A4Q53GD3 NUTF2P7-201ENST00000453086 375 ntBASIC5□□□□□ -1.61
SLC44A4Q53GD3 AC091153.1-201ENST00000466297 402 ntBASIC5□□□□□ -1.61
SLC44A4Q53GD3 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5□□□□□ -1.61
SLC44A4Q53GD3 RN7SL441P-201ENST00000492388 296 ntBASIC5□□□□□ -1.61
SLC44A4Q53GD3 OR4G11P-201ENST00000492842 939 ntBASIC5□□□□□ -1.61
SLC44A4Q53GD3 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC5□□□□□ -1.61
SLC44A4Q53GD3 AC093281.2-201ENST00000510153 597 ntBASIC5□□□□□ -1.61
SLC44A4Q53GD3 MTND3P5-201ENST00000512798 333 ntBASIC5□□□□□ -1.61
SLC44A4Q53GD3 MTCO1P30-201ENST00000515244 580 ntBASIC5□□□□□ -1.61
SLC44A4Q53GD3 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC5□□□□□ -1.61
SLC44A4Q53GD3 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5□□□□□ -1.61
SLC44A4Q53GD3 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5□□□□□ -1.61
SLC44A4Q53GD3 AKIRIN1P1-201ENST00000547384 544 ntBASIC5□□□□□ -1.61
SLC44A4Q53GD3 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC5□□□□□ -1.61
SLC44A4Q53GD3 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5□□□□□ -1.61
SLC44A4Q53GD3 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC5□□□□□ -1.61
SLC44A4Q53GD3 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5□□□□□ -1.61
SLC44A4Q53GD3 AC011260.1-201ENST00000578420 472 ntBASIC5□□□□□ -1.61
SLC44A4Q53GD3 RN7SL176P-201ENST00000580352 264 ntBASIC5□□□□□ -1.61
SLC44A4Q53GD3 RPL12P25-202ENST00000598100 674 ntBASIC5□□□□□ -1.61
SLC44A4Q53GD3 AC112220.3-201ENST00000605502 502 ntBASIC5□□□□□ -1.61
SLC44A4Q53GD3 HSPE1P14-201ENST00000605812 302 ntBASIC5□□□□□ -1.61
SLC44A4Q53GD3 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5□□□□□ -1.61
SLC44A4Q53GD3 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
SLC44A4Q53GD3 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5□□□□□ -1.61
SLC44A4Q53GD3 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5□□□□□ -1.61
SLC44A4Q53GD3 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5□□□□□ -1.61
SLC44A4Q53GD3 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SLC44A4Q53GD3 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SLC44A4Q53GD3 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5□□□□□ -1.61
SLC44A4Q53GD3 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC5□□□□□ -1.61
SLC44A4Q53GD3 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5□□□□□ -1.61
SLC44A4Q53GD3 AL390237.1-201ENST00000404226 1415 ntBASIC4.99□□□□□ -1.61
SLC44A4Q53GD3 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SLC44A4Q53GD3 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SLC44A4Q53GD3 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.99□□□□□ -1.61
SLC44A4Q53GD3 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
SLC44A4Q53GD3 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.99□□□□□ -1.61
SLC44A4Q53GD3 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SLC44A4Q53GD3 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
SLC44A4Q53GD3 Y_RNA.77-201ENST00000362962 107 ntBASIC4.99□□□□□ -1.61
SLC44A4Q53GD3 RNU6-444P-201ENST00000383988 108 ntBASIC4.99□□□□□ -1.61
SLC44A4Q53GD3 RNU6-253P-201ENST00000384730 105 ntBASIC4.99□□□□□ -1.61
SLC44A4Q53GD3 U3.30-201ENST00000391308 210 ntBASIC4.99□□□□□ -1.61
SLC44A4Q53GD3 PIGPP2-201ENST00000411569 458 ntBASIC4.99□□□□□ -1.61
SLC44A4Q53GD3 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.99□□□□□ -1.61
SLC44A4Q53GD3 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.99□□□□□ -1.61
SLC44A4Q53GD3 AC233981.1-201ENST00000423224 461 ntBASIC4.99□□□□□ -1.61
SLC44A4Q53GD3 RPS26P47-201ENST00000427219 348 ntBASIC4.99□□□□□ -1.61
SLC44A4Q53GD3 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.99□□□□□ -1.61
SLC44A4Q53GD3 AC098826.1-201ENST00000433943 471 ntBASIC4.99□□□□□ -1.61
SLC44A4Q53GD3 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.99□□□□□ -1.61
SLC44A4Q53GD3 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.99□□□□□ -1.61
SLC44A4Q53GD3 RPL7AP61-201ENST00000443410 636 ntBASIC4.99□□□□□ -1.61
SLC44A4Q53GD3 GEMIN8P3-201ENST00000445417 720 ntBASIC4.99□□□□□ -1.61
SLC44A4Q53GD3 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.99□□□□□ -1.61
SLC44A4Q53GD3 AL591363.1-201ENST00000450091 483 ntBASIC4.99□□□□□ -1.61
SLC44A4Q53GD3 OR6C5P-201ENST00000452388 923 ntBASIC4.99□□□□□ -1.61
SLC44A4Q53GD3 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC4.99□□□□□ -1.61
SLC44A4Q53GD3 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC4.99□□□□□ -1.61
SLC44A4Q53GD3 AC112206.1-201ENST00000468416 477 ntBASIC4.99□□□□□ -1.61
SLC44A4Q53GD3 AC093840.1-201ENST00000511599 336 ntBASIC4.99□□□□□ -1.61
SLC44A4Q53GD3 RN7SKP96-201ENST00000516948 297 ntBASIC4.99□□□□□ -1.61
SLC44A4Q53GD3 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC4.99□□□□□ -1.61
SLC44A4Q53GD3 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.99□□□□□ -1.61
SLC44A4Q53GD3 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.99□□□□□ -1.61
SLC44A4Q53GD3 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.99□□□□□ -1.61
SLC44A4Q53GD3 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC4.99□□□□□ -1.61
SLC44A4Q53GD3 NDUFB4P11-201ENST00000560510 395 ntBASIC4.99□□□□□ -1.61
SLC44A4Q53GD3 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.99□□□□□ -1.61
SLC44A4Q53GD3 AC018552.3-201ENST00000567416 561 ntBASIC4.99□□□□□ -1.61
SLC44A4Q53GD3 AP005119.2-201ENST00000579735 1105 ntBASIC4.99□□□□□ -1.61
SLC44A4Q53GD3 AC022726.1-201ENST00000587475 207 ntBASIC4.99□□□□□ -1.61
SLC44A4Q53GD3 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.99□□□□□ -1.61
SLC44A4Q53GD3 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.99□□□□□ -1.61
SLC44A4Q53GD3 AC103792.1-201ENST00000603591 919 ntBASIC4.99□□□□□ -1.61
SLC44A4Q53GD3 DUXAP11-201ENST00000603858 526 ntBASIC4.99□□□□□ -1.61
SLC44A4Q53GD3 AC091946.2-201ENST00000606105 291 ntBASIC4.99□□□□□ -1.61
SLC44A4Q53GD3 AP000254.1-201ENST00000609934 520 ntBASIC4.99□□□□□ -1.61
SLC44A4Q53GD3 AC116447.1-201ENST00000613153 453 ntBASIC4.99□□□□□ -1.61
SLC44A4Q53GD3 LINC00901.1-201ENST00000617252 152 ntBASIC4.99□□□□□ -1.61
SLC44A4Q53GD3 AC120349.2-201ENST00000625002 298 ntBASIC4.99□□□□□ -1.61
SLC44A4Q53GD3 AC026634.1-201ENST00000634369 198 ntBASIC4.99□□□□□ -1.61
SLC44A4Q53GD3 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.99□□□□□ -1.61
SLC44A4Q53GD3 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.99□□□□□ -1.61
SLC44A4Q53GD3 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.99□□□□□ -1.61
SLC44A4Q53GD3 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
SLC44A4Q53GD3 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
SLC44A4Q53GD3 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SLC44A4Q53GD3 CDR1-202ENST00000625883 1485 ntBASIC4.99□□□□□ -1.61
SLC44A4Q53GD3 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SLC44A4Q53GD3 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.99□□□□□ -1.61
SLC44A4Q53GD3 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
SLC44A4Q53GD3 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms