Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 RMST_10.1-201ENST00000616309 154 ntBASIC4.25□□□□□ -1.73
GABPAQ06546 U6.48-201ENST00000618523 106 ntBASIC4.25□□□□□ -1.73
GABPAQ06546 AC106730.3-201ENST00000624568 641 ntBASIC4.25□□□□□ -1.73
GABPAQ06546 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.25□□□□□ -1.73
GABPAQ06546 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.25□□□□□ -1.73
GABPAQ06546 AC010329.2-201ENST00000595195 2737 ntBASIC4.25□□□□□ -1.73
GABPAQ06546 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
GABPAQ06546 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
GABPAQ06546 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
GABPAQ06546 AC083899.2-201ENST00000423285 1376 ntBASIC4.25□□□□□ -1.73
GABPAQ06546 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
GABPAQ06546 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
GABPAQ06546 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.25□□□□□ -1.73
GABPAQ06546 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
GABPAQ06546 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
GABPAQ06546 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
GABPAQ06546 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
GABPAQ06546 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.24□□□□□ -1.73
GABPAQ06546 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
GABPAQ06546 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.24□□□□□ -1.73
GABPAQ06546 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.24□□□□□ -1.73
GABPAQ06546 OR10J6P-201ENST00000289731 930 ntBASIC4.24□□□□□ -1.73
GABPAQ06546 METTL21EP-201ENST00000298105 713 ntBASIC4.24□□□□□ -1.73
GABPAQ06546 RNU6-98P-201ENST00000384173 107 ntBASIC4.24□□□□□ -1.73
GABPAQ06546 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
GABPAQ06546 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.24□□□□□ -1.73
GABPAQ06546 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.24□□□□□ -1.73
GABPAQ06546 AC017079.2-201ENST00000416102 485 ntBASIC4.24□□□□□ -1.73
GABPAQ06546 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC4.24□□□□□ -1.73
GABPAQ06546 AC097713.2-201ENST00000430199 356 ntBASIC4.24□□□□□ -1.73
GABPAQ06546 UBE2V1P6-201ENST00000430840 422 ntBASIC4.24□□□□□ -1.73
GABPAQ06546 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
GABPAQ06546 RPL7P29-201ENST00000437151 728 ntBASIC4.24□□□□□ -1.73
GABPAQ06546 AL356535.1-201ENST00000440335 398 ntBASIC4.24□□□□□ -1.73
GABPAQ06546 AC092809.1-201ENST00000441469 474 ntBASIC4.24□□□□□ -1.73
GABPAQ06546 MOB1AP2-201ENST00000446060 614 ntBASIC4.24□□□□□ -1.73
GABPAQ06546 AL049829.1-201ENST00000465411 156 ntBASIC4.24□□□□□ -1.73
GABPAQ06546 WBP1LP4-201ENST00000505043 344 ntBASIC4.24□□□□□ -1.73
GABPAQ06546 AC112518.2-201ENST00000508565 425 ntBASIC4.24□□□□□ -1.73
GABPAQ06546 CR383656.14-201ENST00000551951 406 ntBASIC4.24□□□□□ -1.73
GABPAQ06546 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.24□□□□□ -1.73
GABPAQ06546 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.24□□□□□ -1.73
GABPAQ06546 AC006116.10-201ENST00000591836 581 ntBASIC4.24□□□□□ -1.73
GABPAQ06546 AC006077.1-201ENST00000604746 343 ntBASIC4.24□□□□□ -1.73
GABPAQ06546 BNIP3P19-201ENST00000605397 577 ntBASIC4.24□□□□□ -1.73
GABPAQ06546 BRDTP1-201ENST00000605735 677 ntBASIC4.24□□□□□ -1.73
GABPAQ06546 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.24□□□□□ -1.73
GABPAQ06546 AC009229.4-201ENST00000623854 1947 ntBASIC4.24□□□□□ -1.73
GABPAQ06546 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
GABPAQ06546 MTND4P31-201ENST00000425607 1343 ntBASIC4.23□□□□□ -1.73
GABPAQ06546 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
GABPAQ06546 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
GABPAQ06546 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
GABPAQ06546 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.23□□□□□ -1.73
GABPAQ06546 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
GABPAQ06546 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
GABPAQ06546 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
GABPAQ06546 Y_RNA.333-201ENST00000365274 102 ntBASIC4.23□□□□□ -1.73
GABPAQ06546 AC234772.1-201ENST00000377927 937 ntBASIC4.23□□□□□ -1.73
GABPAQ06546 RNVU1-14-201ENST00000384770 164 ntBASIC4.23□□□□□ -1.73
GABPAQ06546 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
GABPAQ06546 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.23□□□□□ -1.73
GABPAQ06546 HMGB3P18-201ENST00000406327 590 ntBASIC4.23□□□□□ -1.73
GABPAQ06546 RN7SKP177-201ENST00000410567 355 ntBASIC4.23□□□□□ -1.73
GABPAQ06546 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.23□□□□□ -1.73
GABPAQ06546 AL445183.3-201ENST00000414168 502 ntBASIC4.23□□□□□ -1.73
GABPAQ06546 RPS7P15-201ENST00000415804 584 ntBASIC4.23□□□□□ -1.73
GABPAQ06546 SAGE2P-201ENST00000420011 2126 ntBASIC4.23□□□□□ -1.73
GABPAQ06546 AL606495.1-201ENST00000422100 813 ntBASIC4.23□□□□□ -1.73
GABPAQ06546 RPL21P109-201ENST00000422213 475 ntBASIC4.23□□□□□ -1.73
GABPAQ06546 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.23□□□□□ -1.73
GABPAQ06546 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.23□□□□□ -1.73
GABPAQ06546 RPL7P4-203ENST00000430239 730 ntBASIC4.23□□□□□ -1.73
GABPAQ06546 AL353597.2-202ENST00000434901 373 ntBASIC4.23□□□□□ -1.73
GABPAQ06546 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.23□□□□□ -1.73
GABPAQ06546 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.23□□□□□ -1.73
GABPAQ06546 ARL5AP2-201ENST00000444698 533 ntBASIC4.23□□□□□ -1.73
GABPAQ06546 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.23□□□□□ -1.73
GABPAQ06546 AC010655.1-201ENST00000449336 292 ntBASIC4.23□□□□□ -1.73
GABPAQ06546 MTND2P8-201ENST00000450555 1025 ntBASIC4.23□□□□□ -1.73
GABPAQ06546 TPMTP4-201ENST00000450749 678 ntBASIC4.23□□□□□ -1.73
GABPAQ06546 EIF4A1P11-201ENST00000451239 222 ntBASIC4.23□□□□□ -1.73
GABPAQ06546 CYCSP20-201ENST00000473154 315 ntBASIC4.23□□□□□ -1.73
GABPAQ06546 AC069499.1-201ENST00000489433 509 ntBASIC4.23□□□□□ -1.73
GABPAQ06546 OR5H3P-201ENST00000502817 919 ntBASIC4.23□□□□□ -1.73
GABPAQ06546 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.23□□□□□ -1.73
GABPAQ06546 RNU6-579P-201ENST00000516879 102 ntBASIC4.23□□□□□ -1.73
GABPAQ06546 RNU6-334P-201ENST00000517072 102 ntBASIC4.23□□□□□ -1.73
GABPAQ06546 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.23□□□□□ -1.73
GABPAQ06546 AC092451.2-201ENST00000538746 658 ntBASIC4.23□□□□□ -1.73
GABPAQ06546 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.23□□□□□ -1.73
GABPAQ06546 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC4.23□□□□□ -1.73
GABPAQ06546 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.23□□□□□ -1.73
GABPAQ06546 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.23□□□□□ -1.73
GABPAQ06546 AC104229.1-201ENST00000561364 255 ntBASIC4.23□□□□□ -1.73
GABPAQ06546 VN1R84P-201ENST00000593697 235 ntBASIC4.23□□□□□ -1.73
GABPAQ06546 AL139395.1-201ENST00000603662 160 ntBASIC4.23□□□□□ -1.73
GABPAQ06546 AC026741.1-201ENST00000605892 482 ntBASIC4.23□□□□□ -1.73
GABPAQ06546 AL355816.1-201ENST00000607951 118 ntBASIC4.23□□□□□ -1.73
GABPAQ06546 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms