Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HIST1H3AP68431 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.07□□□□□ -1.92
HIST1H3AP68431 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HIST1H3AP68431 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HIST1H3AP68431 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HIST1H3AP68431 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HIST1H3AP68431 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HIST1H3AP68431 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HIST1H3AP68431 OTUD4P1-201ENST00000237841 3067 ntBASIC3.06□□□□□ -1.92
HIST1H3AP68431 FRG1CP-201ENST00000358464 769 ntBASIC3.06□□□□□ -1.92
HIST1H3AP68431 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
HIST1H3AP68431 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
HIST1H3AP68431 RN7SKP111-201ENST00000410349 271 ntBASIC3.06□□□□□ -1.92
HIST1H3AP68431 CYCSP19-201ENST00000411715 316 ntBASIC3.06□□□□□ -1.92
HIST1H3AP68431 SYF2P2-201ENST00000417620 583 ntBASIC3.06□□□□□ -1.92
HIST1H3AP68431 AL592494.2-201ENST00000425455 1548 ntBASIC3.06□□□□□ -1.92
HIST1H3AP68431 NIPA2P1-201ENST00000426223 976 ntBASIC3.06□□□□□ -1.92
HIST1H3AP68431 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.06□□□□□ -1.92
HIST1H3AP68431 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.06□□□□□ -1.92
HIST1H3AP68431 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.06□□□□□ -1.92
HIST1H3AP68431 AC073387.1-201ENST00000453261 709 ntBASIC3.06□□□□□ -1.92
HIST1H3AP68431 U3.44-201ENST00000458938 192 ntBASIC3.06□□□□□ -1.92
HIST1H3AP68431 AP000563.1-201ENST00000490865 758 ntBASIC3.06□□□□□ -1.92
HIST1H3AP68431 AL133372.1-201ENST00000493565 745 ntBASIC3.06□□□□□ -1.92
HIST1H3AP68431 AL035404.1-201ENST00000497982 568 ntBASIC3.06□□□□□ -1.92
HIST1H3AP68431 AC078918.1-201ENST00000498515 228 ntBASIC3.06□□□□□ -1.92
HIST1H3AP68431 AC020893.1-201ENST00000502452 580 ntBASIC3.06□□□□□ -1.92
HIST1H3AP68431 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.06□□□□□ -1.92
HIST1H3AP68431 PTGES3P3-201ENST00000511479 482 ntBASIC3.06□□□□□ -1.92
HIST1H3AP68431 RN7SKP18-201ENST00000516005 275 ntBASIC3.06□□□□□ -1.92
HIST1H3AP68431 RNU1-95P-201ENST00000516357 160 ntBASIC3.06□□□□□ -1.92
HIST1H3AP68431 RNU1-128P-201ENST00000516704 160 ntBASIC3.06□□□□□ -1.92
HIST1H3AP68431 SNORA70.19-201ENST00000516717 90 ntBASIC3.06□□□□□ -1.92
HIST1H3AP68431 RN7SKP234-201ENST00000517173 224 ntBASIC3.06□□□□□ -1.92
HIST1H3AP68431 SOD1P3-201ENST00000518682 454 ntBASIC3.06□□□□□ -1.92
HIST1H3AP68431 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.06□□□□□ -1.92
HIST1H3AP68431 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC3.06□□□□□ -1.92
HIST1H3AP68431 TGIF1P1-201ENST00000558095 802 ntBASIC3.06□□□□□ -1.92
HIST1H3AP68431 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.06□□□□□ -1.92
HIST1H3AP68431 AC093227.2-201ENST00000589357 285 ntBASIC3.06□□□□□ -1.92
HIST1H3AP68431 AC010591.1-201ENST00000603941 649 ntBASIC3.06□□□□□ -1.92
HIST1H3AP68431 AC112230.1-201ENST00000604342 547 ntBASIC3.06□□□□□ -1.92
HIST1H3AP68431 AC090525.3-201ENST00000605601 189 ntBASIC3.06□□□□□ -1.92
HIST1H3AP68431 RNA5SP108-201ENST00000605921 117 ntBASIC3.06□□□□□ -1.92
HIST1H3AP68431 AC018754.1-201ENST00000607486 925 ntBASIC3.06□□□□□ -1.92
HIST1H3AP68431 AC018816.2-201ENST00000621460 353 ntBASIC3.06□□□□□ -1.92
HIST1H3AP68431 AC110801.1-201ENST00000623590 212 ntBASIC3.06□□□□□ -1.92
HIST1H3AP68431 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.06□□□□□ -1.92
HIST1H3AP68431 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.06□□□□□ -1.92
HIST1H3AP68431 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
HIST1H3AP68431 AC090337.1-201ENST00000579651 2074 ntBASIC3.05□□□□□ -1.92
HIST1H3AP68431 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
HIST1H3AP68431 ZNF33CP-201ENST00000432492 2030 ntBASIC3.05□□□□□ -1.92
HIST1H3AP68431 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HIST1H3AP68431 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
HIST1H3AP68431 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.05□□□□□ -1.92
HIST1H3AP68431 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
HIST1H3AP68431 RAD1P1-201ENST00000231383 813 ntBASIC3.05□□□□□ -1.92
HIST1H3AP68431 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
HIST1H3AP68431 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HIST1H3AP68431 AL445189.1-201ENST00000405722 338 ntBASIC3.05□□□□□ -1.92
HIST1H3AP68431 RNA5SP498-201ENST00000411342 120 ntBASIC3.05□□□□□ -1.92
HIST1H3AP68431 RAB9AP3-201ENST00000412737 573 ntBASIC3.05□□□□□ -1.92
HIST1H3AP68431 XKRYP4-201ENST00000414395 483 ntBASIC3.05□□□□□ -1.92
HIST1H3AP68431 MTCO1P43-201ENST00000431831 488 ntBASIC3.05□□□□□ -1.92
HIST1H3AP68431 AC007389.2-201ENST00000434630 306 ntBASIC3.05□□□□□ -1.92
HIST1H3AP68431 CYCSP43-201ENST00000438233 310 ntBASIC3.05□□□□□ -1.92
HIST1H3AP68431 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.05□□□□□ -1.92
HIST1H3AP68431 AC239367.2-201ENST00000447309 705 ntBASIC3.05□□□□□ -1.92
HIST1H3AP68431 RAB9AP1-201ENST00000449393 573 ntBASIC3.05□□□□□ -1.92
HIST1H3AP68431 RPL31P20-201ENST00000449593 360 ntBASIC3.05□□□□□ -1.92
HIST1H3AP68431 XKRYP5-201ENST00000449659 483 ntBASIC3.05□□□□□ -1.92
HIST1H3AP68431 MRPS31P2-201ENST00000451581 518 ntBASIC3.05□□□□□ -1.92
HIST1H3AP68431 RBMY2UP-201ENST00000453474 324 ntBASIC3.05□□□□□ -1.92
HIST1H3AP68431 RPL6P9-201ENST00000466502 859 ntBASIC3.05□□□□□ -1.92
HIST1H3AP68431 ACTR3P3-201ENST00000480448 893 ntBASIC3.05□□□□□ -1.92
HIST1H3AP68431 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.05□□□□□ -1.92
HIST1H3AP68431 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.05□□□□□ -1.92
HIST1H3AP68431 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.05□□□□□ -1.92
HIST1H3AP68431 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.05□□□□□ -1.92
HIST1H3AP68431 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.05□□□□□ -1.92
HIST1H3AP68431 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.05□□□□□ -1.92
HIST1H3AP68431 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.05□□□□□ -1.92
HIST1H3AP68431 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.05□□□□□ -1.92
HIST1H3AP68431 GTF2IP22-201ENST00000554443 182 ntBASIC3.05□□□□□ -1.92
HIST1H3AP68431 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.05□□□□□ -1.92
HIST1H3AP68431 BNIP3P5-201ENST00000562290 498 ntBASIC3.05□□□□□ -1.92
HIST1H3AP68431 AC106785.1-201ENST00000565935 262 ntBASIC3.05□□□□□ -1.92
HIST1H3AP68431 AC115085.1-201ENST00000588924 229 ntBASIC3.05□□□□□ -1.92
HIST1H3AP68431 FAM60CP-201ENST00000591086 664 ntBASIC3.05□□□□□ -1.92
HIST1H3AP68431 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC3.05□□□□□ -1.92
HIST1H3AP68431 AL354950.1-201ENST00000614150 568 ntBASIC3.05□□□□□ -1.92
HIST1H3AP68431 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.05□□□□□ -1.92
HIST1H3AP68431 U4.6-201ENST00000621618 127 ntBASIC3.05□□□□□ -1.92
HIST1H3AP68431 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.05□□□□□ -1.92
HIST1H3AP68431 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
HIST1H3AP68431 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
HIST1H3AP68431 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
HIST1H3AP68431 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
HIST1H3AP68431 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms