Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AP006245.1-201ENST00000522549 120 ntBASIC3.01□□□□□ -1.93
UBA52P62987 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.01□□□□□ -1.93
UBA52P62987 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.01□□□□□ -1.93
UBA52P62987 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.01□□□□□ -1.93
UBA52P62987 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.01□□□□□ -1.93
UBA52P62987 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.01□□□□□ -1.93
UBA52P62987 VN1R92P-201ENST00000598511 928 ntBASIC3.01□□□□□ -1.93
UBA52P62987 AL031985.2-201ENST00000600955 480 ntBASIC3.01□□□□□ -1.93
UBA52P62987 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.01□□□□□ -1.93
UBA52P62987 XIST_intron.1-201ENST00000619444 68 ntBASIC3.01□□□□□ -1.93
UBA52P62987 AP001002.2-201ENST00000625137 386 ntBASIC3.01□□□□□ -1.93
UBA52P62987 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.01□□□□□ -1.93
UBA52P62987 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.01□□□□□ -1.93
UBA52P62987 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.01□□□□□ -1.93
UBA52P62987 AC244258.1-201ENST00000637553 1071 ntBASIC3.01□□□□□ -1.93
UBA52P62987 AL392088.2-201ENST00000637607 285 ntBASIC3.01□□□□□ -1.93
UBA52P62987 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.01□□□□□ -1.93
UBA52P62987 AC004972.1-201ENST00000623934 2209 ntBASIC3.01□□□□□ -1.93
UBA52P62987 AP001148.1-201ENST00000624124 2359 ntBASIC3.01□□□□□ -1.93
UBA52P62987 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
UBA52P62987 AC068647.1-201ENST00000489539 2265 ntBASIC3□□□□□ -1.93
UBA52P62987 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3□□□□□ -1.93
UBA52P62987 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3□□□□□ -1.93
UBA52P62987 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3□□□□□ -1.93
UBA52P62987 RNA5SP50-201ENST00000363731 107 ntBASIC3□□□□□ -1.93
UBA52P62987 AC234772.1-201ENST00000377927 937 ntBASIC3□□□□□ -1.93
UBA52P62987 HMGB3P18-201ENST00000406327 590 ntBASIC3□□□□□ -1.93
UBA52P62987 MTHFD2P2-201ENST00000407725 247 ntBASIC3□□□□□ -1.93
UBA52P62987 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
UBA52P62987 RANP4-201ENST00000413361 655 ntBASIC3□□□□□ -1.93
UBA52P62987 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3□□□□□ -1.93
UBA52P62987 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC3□□□□□ -1.93
UBA52P62987 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3□□□□□ -1.93
UBA52P62987 AC073063.1-201ENST00000434352 607 ntBASIC3□□□□□ -1.93
UBA52P62987 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3□□□□□ -1.93
UBA52P62987 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3□□□□□ -1.93
UBA52P62987 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3□□□□□ -1.93
UBA52P62987 AC073387.1-201ENST00000453261 709 ntBASIC3□□□□□ -1.93
UBA52P62987 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3□□□□□ -1.93
UBA52P62987 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC3□□□□□ -1.93
UBA52P62987 RN7SL283P-201ENST00000489055 303 ntBASIC3□□□□□ -1.93
UBA52P62987 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3□□□□□ -1.93
UBA52P62987 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3□□□□□ -1.93
UBA52P62987 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3□□□□□ -1.93
UBA52P62987 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3□□□□□ -1.93
UBA52P62987 AL121766.1-201ENST00000547436 487 ntBASIC3□□□□□ -1.93
UBA52P62987 TRAV15-201ENST00000556680 249 ntBASIC3□□□□□ -1.93
UBA52P62987 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3□□□□□ -1.93
UBA52P62987 AC010591.1-201ENST00000603941 649 ntBASIC3□□□□□ -1.93
UBA52P62987 RNU1-30P-201ENST00000606575 163 ntBASIC3□□□□□ -1.93
UBA52P62987 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3□□□□□ -1.93
UBA52P62987 SNORA50A-202ENST00000629536 136 ntBASIC3□□□□□ -1.93
UBA52P62987 USP8P1-201ENST00000494673 3183 ntBASIC3□□□□□ -1.93
UBA52P62987 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3□□□□□ -1.93
UBA52P62987 AL139811.1-201ENST00000424779 2299 ntBASIC3□□□□□ -1.93
UBA52P62987 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
UBA52P62987 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3□□□□□ -1.93
UBA52P62987 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.99□□□□□ -1.93
UBA52P62987 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
UBA52P62987 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
UBA52P62987 AL049781.1-201ENST00000623195 3585 ntBASIC2.99□□□□□ -1.93
UBA52P62987 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.99□□□□□ -1.93
UBA52P62987 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
UBA52P62987 U3.11-201ENST00000364476 212 ntBASIC2.99□□□□□ -1.93
UBA52P62987 RNA5SP267-201ENST00000364893 126 ntBASIC2.99□□□□□ -1.93
UBA52P62987 U3.15-201ENST00000365398 212 ntBASIC2.99□□□□□ -1.93
UBA52P62987 MIR634-201ENST00000385208 97 ntBASIC2.99□□□□□ -1.93
UBA52P62987 NDUFB4P4-201ENST00000404822 243 ntBASIC2.99□□□□□ -1.93
UBA52P62987 SNORA11.2-201ENST00000408318 127 ntBASIC2.99□□□□□ -1.93
UBA52P62987 AL158156.1-201ENST00000422509 473 ntBASIC2.99□□□□□ -1.93
UBA52P62987 AC012498.1-201ENST00000424037 437 ntBASIC2.99□□□□□ -1.93
UBA52P62987 AC009969.1-201ENST00000438726 172 ntBASIC2.99□□□□□ -1.93
UBA52P62987 SNORA71B-202ENST00000439232 272 ntBASIC2.99□□□□□ -1.93
UBA52P62987 AC092641.1-201ENST00000440229 772 ntBASIC2.99□□□□□ -1.93
UBA52P62987 ELOCP10-201ENST00000440624 327 ntBASIC2.99□□□□□ -1.93
UBA52P62987 RNF148-202ENST00000447240 839 ntTSL 2 BASIC2.99□□□□□ -1.93
UBA52P62987 UBDP1-202ENST00000457888 382 ntBASIC2.99□□□□□ -1.93
UBA52P62987 SNRPGP3-201ENST00000469405 227 ntBASIC2.99□□□□□ -1.93
UBA52P62987 RN7SL601P-201ENST00000471221 293 ntBASIC2.99□□□□□ -1.93
UBA52P62987 TAF8-207ENST00000482432 556 ntTSL 2 BASIC2.99□□□□□ -1.93
UBA52P62987 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.99□□□□□ -1.93
UBA52P62987 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC2.99□□□□□ -1.93
UBA52P62987 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC2.99□□□□□ -1.93
UBA52P62987 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC2.99□□□□□ -1.93
UBA52P62987 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC2.99□□□□□ -1.93
UBA52P62987 VN1R84P-201ENST00000593697 235 ntBASIC2.99□□□□□ -1.93
UBA52P62987 AC020914.6-201ENST00000594327 272 ntBASIC2.99□□□□□ -1.93
UBA52P62987 ELOCP34-201ENST00000604436 327 ntBASIC2.99□□□□□ -1.93
UBA52P62987 AC067838.1-201ENST00000606064 577 ntBASIC2.99□□□□□ -1.93
UBA52P62987 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC2.99□□□□□ -1.93
UBA52P62987 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC2.99□□□□□ -1.93
UBA52P62987 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.99□□□□□ -1.93
UBA52P62987 AC119674.1-207ENST00000641355 633 ntBASIC2.99□□□□□ -1.93
UBA52P62987 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC2.99□□□□□ -1.93
UBA52P62987 SAGE2P-201ENST00000420011 2126 ntBASIC2.99□□□□□ -1.93
UBA52P62987 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC2.99□□□□□ -1.93
UBA52P62987 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
UBA52P62987 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.98□□□□□ -1.93
UBA52P62987 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC2.98□□□□□ -1.93
UBA52P62987 DYNLT3P1-201ENST00000378574 347 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms