Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC083923.1-201ENST00000523708 376 ntBASIC3.56□□□□□ -1.84
LMO4P61968 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.56□□□□□ -1.84
LMO4P61968 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.56□□□□□ -1.84
LMO4P61968 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
LMO4P61968 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.56□□□□□ -1.84
LMO4P61968 AL352979.3-201ENST00000553515 247 ntBASIC3.56□□□□□ -1.84
LMO4P61968 AL391156.1-201ENST00000554965 554 ntBASIC3.56□□□□□ -1.84
LMO4P61968 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.56□□□□□ -1.84
LMO4P61968 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.56□□□□□ -1.84
LMO4P61968 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.56□□□□□ -1.84
LMO4P61968 RPL23AP97-201ENST00000568955 471 ntBASIC3.56□□□□□ -1.84
LMO4P61968 AC022069.1-201ENST00000582910 658 ntBASIC3.56□□□□□ -1.84
LMO4P61968 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.56□□□□□ -1.84
LMO4P61968 AP001981.2-201ENST00000603241 418 ntBASIC3.56□□□□□ -1.84
LMO4P61968 AC004987.4-201ENST00000603383 338 ntBASIC3.56□□□□□ -1.84
LMO4P61968 AL590229.1-201ENST00000603497 542 ntBASIC3.56□□□□□ -1.84
LMO4P61968 AL109618.2-201ENST00000605527 211 ntBASIC3.56□□□□□ -1.84
LMO4P61968 AC072039.2-201ENST00000608883 439 ntBASIC3.56□□□□□ -1.84
LMO4P61968 AC022306.2-201ENST00000617563 647 ntBASIC3.56□□□□□ -1.84
LMO4P61968 FRG1HP-204ENST00000617940 757 ntBASIC3.56□□□□□ -1.84
LMO4P61968 AC007546.1-201ENST00000619452 559 ntBASIC3.56□□□□□ -1.84
LMO4P61968 AC079248.2-201ENST00000623779 326 ntBASIC3.56□□□□□ -1.84
LMO4P61968 AC112484.5-201ENST00000624189 228 ntBASIC3.56□□□□□ -1.84
LMO4P61968 OR1S1-201ENST00000624470 978 ntBASIC3.56□□□□□ -1.84
LMO4P61968 AC010608.2-201ENST00000624830 470 ntBASIC3.56□□□□□ -1.84
LMO4P61968 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
LMO4P61968 AC084035.1-201ENST00000634543 607 ntBASIC3.56□□□□□ -1.84
LMO4P61968 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
LMO4P61968 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
LMO4P61968 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
LMO4P61968 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC3.56□□□□□ -1.84
LMO4P61968 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.56□□□□□ -1.84
LMO4P61968 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
LMO4P61968 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
LMO4P61968 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
LMO4P61968 MAPK10-303ENST00000641324 3959 ntBASIC3.55□□□□□ -1.84
LMO4P61968 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
LMO4P61968 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC3.55□□□□□ -1.84
LMO4P61968 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
LMO4P61968 AC022893.2-201ENST00000564832 3296 ntBASIC3.55□□□□□ -1.84
LMO4P61968 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
LMO4P61968 SPRR2C-201ENST00000290702 219 ntBASIC3.55□□□□□ -1.84
LMO4P61968 Y_RNA.77-201ENST00000362962 107 ntBASIC3.55□□□□□ -1.84
LMO4P61968 RNU1-87P-201ENST00000363727 170 ntBASIC3.55□□□□□ -1.84
LMO4P61968 Y_RNA.194-201ENST00000363985 102 ntBASIC3.55□□□□□ -1.84
LMO4P61968 RNU4-75P-201ENST00000364621 146 ntBASIC3.55□□□□□ -1.84
LMO4P61968 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
LMO4P61968 RPS3AP26-201ENST00000398259 784 ntBASIC3.55□□□□□ -1.84
LMO4P61968 RN7SKP33-201ENST00000410942 340 ntBASIC3.55□□□□□ -1.84
LMO4P61968 MTCO1P21-201ENST00000416634 589 ntBASIC3.55□□□□□ -1.84
LMO4P61968 AL356095.1-201ENST00000417217 199 ntBASIC3.55□□□□□ -1.84
LMO4P61968 Z75741.2-201ENST00000417272 1167 ntBASIC3.55□□□□□ -1.84
LMO4P61968 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.55□□□□□ -1.84
LMO4P61968 RPL7P53-201ENST00000421245 739 ntBASIC3.55□□□□□ -1.84
LMO4P61968 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.55□□□□□ -1.84
LMO4P61968 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
LMO4P61968 AL593851.1-201ENST00000426171 157 ntBASIC3.55□□□□□ -1.84
LMO4P61968 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
LMO4P61968 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC3.55□□□□□ -1.84
LMO4P61968 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.55□□□□□ -1.84
LMO4P61968 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC3.55□□□□□ -1.84
LMO4P61968 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.55□□□□□ -1.84
LMO4P61968 RPL7P22-201ENST00000466005 733 ntBASIC3.55□□□□□ -1.84
LMO4P61968 AC112206.1-201ENST00000468416 477 ntBASIC3.55□□□□□ -1.84
LMO4P61968 AC069528.1-202ENST00000482888 637 ntBASIC3.55□□□□□ -1.84
LMO4P61968 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.55□□□□□ -1.84
LMO4P61968 RPS4XP18-201ENST00000495480 763 ntBASIC3.55□□□□□ -1.84
LMO4P61968 AC080014.1-201ENST00000496877 1201 ntBASIC3.55□□□□□ -1.84
LMO4P61968 AL035404.1-201ENST00000497982 568 ntBASIC3.55□□□□□ -1.84
LMO4P61968 AC107401.1-201ENST00000503426 685 ntBASIC3.55□□□□□ -1.84
LMO4P61968 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
LMO4P61968 MTCO3P7-201ENST00000510008 774 ntBASIC3.55□□□□□ -1.84
LMO4P61968 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC3.55□□□□□ -1.84
LMO4P61968 FABP5P12-201ENST00000515543 389 ntBASIC3.55□□□□□ -1.84
LMO4P61968 SNORD116-26-201ENST00000516006 96 ntBASIC3.55□□□□□ -1.84
LMO4P61968 RNU6-513P-201ENST00000516104 104 ntBASIC3.55□□□□□ -1.84
LMO4P61968 RNU6-232P-201ENST00000517144 64 ntBASIC3.55□□□□□ -1.84
LMO4P61968 HMGB1P23-201ENST00000518743 568 ntBASIC3.55□□□□□ -1.84
LMO4P61968 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.55□□□□□ -1.84
LMO4P61968 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.55□□□□□ -1.84
LMO4P61968 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.55□□□□□ -1.84
LMO4P61968 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.55□□□□□ -1.84
LMO4P61968 OR8R1P-201ENST00000543943 764 ntBASIC3.55□□□□□ -1.84
LMO4P61968 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.55□□□□□ -1.84
LMO4P61968 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.55□□□□□ -1.84
LMO4P61968 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
LMO4P61968 AC022662.1-201ENST00000580252 331 ntBASIC3.55□□□□□ -1.84
LMO4P61968 MIR3936-201ENST00000584304 110 ntBASIC3.55□□□□□ -1.84
LMO4P61968 NTAN1P1-201ENST00000603150 646 ntBASIC3.55□□□□□ -1.84
LMO4P61968 AL392112.1-201ENST00000605115 829 ntBASIC3.55□□□□□ -1.84
LMO4P61968 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.55□□□□□ -1.84
LMO4P61968 AC013468.1-201ENST00000608680 598 ntBASIC3.55□□□□□ -1.84
LMO4P61968 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.55□□□□□ -1.84
LMO4P61968 AC245297.2-201ENST00000610119 565 ntBASIC3.55□□□□□ -1.84
LMO4P61968 MIR6867-201ENST00000610636 67 ntBASIC3.55□□□□□ -1.84
LMO4P61968 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
LMO4P61968 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
LMO4P61968 Z69908.1-201ENST00000622603 247 ntBASIC3.55□□□□□ -1.84
LMO4P61968 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.55□□□□□ -1.84
LMO4P61968 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 150.4 ms