Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC140479.6-201ENST00000633535 357 ntBASIC4.11□□□□□ -1.75
CDH13P55290 AC090897.3-201ENST00000636973 1157 ntBASIC4.11□□□□□ -1.75
CDH13P55290 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CDH13P55290 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
CDH13P55290 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CDH13P55290 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.11□□□□□ -1.75
CDH13P55290 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CDH13P55290 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CDH13P55290 MAPK10-253ENST00000641010 4072 ntBASIC4.11□□□□□ -1.75
CDH13P55290 MTND4P10-201ENST00000446199 1363 ntBASIC4.11□□□□□ -1.75
CDH13P55290 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CDH13P55290 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
CDH13P55290 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CDH13P55290 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CDH13P55290 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CDH13P55290 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.1□□□□□ -1.75
CDH13P55290 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CDH13P55290 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CDH13P55290 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CDH13P55290 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CDH13P55290 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
CDH13P55290 RNU4-92P-201ENST00000363783 136 ntBASIC4.1□□□□□ -1.75
CDH13P55290 RNU1-85P-201ENST00000364127 164 ntBASIC4.1□□□□□ -1.75
CDH13P55290 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CDH13P55290 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CDH13P55290 RNU6-413P-201ENST00000384115 107 ntBASIC4.1□□□□□ -1.75
CDH13P55290 SNORA70E-201ENST00000384492 135 ntBASIC4.1□□□□□ -1.75
CDH13P55290 RNA5SP332-201ENST00000391063 115 ntBASIC4.1□□□□□ -1.75
CDH13P55290 MIR1179-201ENST00000408703 91 ntBASIC4.1□□□□□ -1.75
CDH13P55290 RN7SKP235-201ENST00000410662 305 ntBASIC4.1□□□□□ -1.75
CDH13P55290 AC069218.2-201ENST00000411665 344 ntBASIC4.1□□□□□ -1.75
CDH13P55290 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC4.1□□□□□ -1.75
CDH13P55290 AC016769.2-201ENST00000414815 475 ntBASIC4.1□□□□□ -1.75
CDH13P55290 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.1□□□□□ -1.75
CDH13P55290 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.1□□□□□ -1.75
CDH13P55290 RBMY2KP-201ENST00000418221 992 ntBASIC4.1□□□□□ -1.75
CDH13P55290 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.1□□□□□ -1.75
CDH13P55290 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.1□□□□□ -1.75
CDH13P55290 AC011998.1-201ENST00000433403 117 ntBASIC4.1□□□□□ -1.75
CDH13P55290 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC4.1□□□□□ -1.75
CDH13P55290 AC084290.1-201ENST00000434995 374 ntBASIC4.1□□□□□ -1.75
CDH13P55290 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.1□□□□□ -1.75
CDH13P55290 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.1□□□□□ -1.75
CDH13P55290 AC007327.1-201ENST00000447461 264 ntBASIC4.1□□□□□ -1.75
CDH13P55290 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.1□□□□□ -1.75
CDH13P55290 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC4.1□□□□□ -1.75
CDH13P55290 SNORD11.1-201ENST00000459482 85 ntBASIC4.1□□□□□ -1.75
CDH13P55290 RN7SL98P-201ENST00000462271 300 ntBASIC4.1□□□□□ -1.75
CDH13P55290 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.1□□□□□ -1.75
CDH13P55290 AK3P4-201ENST00000504283 583 ntBASIC4.1□□□□□ -1.75
CDH13P55290 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.1□□□□□ -1.75
CDH13P55290 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.1□□□□□ -1.75
CDH13P55290 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.1□□□□□ -1.75
CDH13P55290 AC087808.1-201ENST00000520501 361 ntBASIC4.1□□□□□ -1.75
CDH13P55290 TRAV8-5-201ENST00000537369 341 ntBASIC4.1□□□□□ -1.75
CDH13P55290 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.1□□□□□ -1.75
CDH13P55290 AC063950.1-201ENST00000552036 308 ntBASIC4.1□□□□□ -1.75
CDH13P55290 CENPUP2-201ENST00000555897 1186 ntBASIC4.1□□□□□ -1.75
CDH13P55290 AC068831.4-201ENST00000556118 109 ntBASIC4.1□□□□□ -1.75
CDH13P55290 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.1□□□□□ -1.75
CDH13P55290 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.1□□□□□ -1.75
CDH13P55290 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.1□□□□□ -1.75
CDH13P55290 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.1□□□□□ -1.75
CDH13P55290 CCDC58P3-201ENST00000590792 430 ntBASIC4.1□□□□□ -1.75
CDH13P55290 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.1□□□□□ -1.75
CDH13P55290 HSPE1P14-201ENST00000605812 302 ntBASIC4.1□□□□□ -1.75
CDH13P55290 AC090948.1-201ENST00000607464 549 ntBASIC4.1□□□□□ -1.75
CDH13P55290 AC103858.2-201ENST00000621471 543 ntBASIC4.1□□□□□ -1.75
CDH13P55290 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.1□□□□□ -1.75
CDH13P55290 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CDH13P55290 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.1□□□□□ -1.75
CDH13P55290 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CDH13P55290 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CDH13P55290 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.1□□□□□ -1.75
CDH13P55290 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CDH13P55290 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.1□□□□□ -1.75
CDH13P55290 AL158163.1-201ENST00000603915 1649 ntBASIC4.1□□□□□ -1.75
CDH13P55290 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.1□□□□□ -1.75
CDH13P55290 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CDH13P55290 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CDH13P55290 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CDH13P55290 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CDH13P55290 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CDH13P55290 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CDH13P55290 NOL8P1-201ENST00000508336 3529 ntBASIC4.09□□□□□ -1.75
CDH13P55290 OR4A15-201ENST00000314706 1035 ntBASIC4.09□□□□□ -1.75
CDH13P55290 RNA5SP513-201ENST00000364648 118 ntBASIC4.09□□□□□ -1.75
CDH13P55290 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CDH13P55290 AC136624.1-201ENST00000400791 413 ntBASIC4.09□□□□□ -1.75
CDH13P55290 ERHP2-201ENST00000402323 299 ntBASIC4.09□□□□□ -1.75
CDH13P55290 SSXP10-201ENST00000402595 565 ntBASIC4.09□□□□□ -1.75
CDH13P55290 AC092634.6-201ENST00000418558 192 ntBASIC4.09□□□□□ -1.75
CDH13P55290 RPL31P45-201ENST00000419532 356 ntBASIC4.09□□□□□ -1.75
CDH13P55290 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC4.09□□□□□ -1.75
CDH13P55290 RPL7P44-201ENST00000424827 742 ntBASIC4.09□□□□□ -1.75
CDH13P55290 COX6CP15-201ENST00000426313 211 ntBASIC4.09□□□□□ -1.75
CDH13P55290 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CDH13P55290 MOB1AP1-201ENST00000430903 535 ntBASIC4.09□□□□□ -1.75
CDH13P55290 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC4.09□□□□□ -1.75
CDH13P55290 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms