Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.64□□□□□ -1.67
MSH6P52701 AC067852.3-201ENST00000589177 561 ntBASIC4.64□□□□□ -1.67
MSH6P52701 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.64□□□□□ -1.67
MSH6P52701 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
MSH6P52701 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
MSH6P52701 AC027287.1-201ENST00000553115 1453 ntBASIC4.63□□□□□ -1.67
MSH6P52701 CR382285.2-201ENST00000624662 1495 ntBASIC4.63□□□□□ -1.67
MSH6P52701 ZNF826P-207ENST00000622273 1910 ntBASIC4.63□□□□□ -1.67
MSH6P52701 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
MSH6P52701 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
MSH6P52701 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4.63□□□□□ -1.67
MSH6P52701 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.63□□□□□ -1.67
MSH6P52701 CUL4AP1-201ENST00000514750 1863 ntBASIC4.63□□□□□ -1.67
MSH6P52701 HSPE1P8-201ENST00000406997 288 ntBASIC4.63□□□□□ -1.67
MSH6P52701 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.63□□□□□ -1.67
MSH6P52701 AL139281.1-201ENST00000422120 335 ntBASIC4.63□□□□□ -1.67
MSH6P52701 BX890604.2-201ENST00000427883 474 ntBASIC4.63□□□□□ -1.67
MSH6P52701 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.63□□□□□ -1.67
MSH6P52701 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC4.63□□□□□ -1.67
MSH6P52701 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.63□□□□□ -1.67
MSH6P52701 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC4.63□□□□□ -1.67
MSH6P52701 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.63□□□□□ -1.67
MSH6P52701 AC008885.1-201ENST00000514930 301 ntBASIC4.63□□□□□ -1.67
MSH6P52701 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC4.63□□□□□ -1.67
MSH6P52701 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.63□□□□□ -1.67
MSH6P52701 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.63□□□□□ -1.67
MSH6P52701 KLKP1-201ENST00000595979 403 ntBASIC4.63□□□□□ -1.67
MSH6P52701 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC4.63□□□□□ -1.67
MSH6P52701 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.63□□□□□ -1.67
MSH6P52701 AP001005.3-201ENST00000622049 129 ntBASIC4.63□□□□□ -1.67
MSH6P52701 AP003485.2-201ENST00000623636 610 ntBASIC4.63□□□□□ -1.67
MSH6P52701 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC4.63□□□□□ -1.67
MSH6P52701 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
MSH6P52701 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
MSH6P52701 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
MSH6P52701 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
MSH6P52701 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
MSH6P52701 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
MSH6P52701 RNU1-89P-201ENST00000384592 164 ntBASIC4.62□□□□□ -1.67
MSH6P52701 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.62□□□□□ -1.67
MSH6P52701 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC4.62□□□□□ -1.67
MSH6P52701 AC084357.1-201ENST00000473404 255 ntBASIC4.62□□□□□ -1.67
MSH6P52701 AC010374.2-201ENST00000512933 535 ntBASIC4.62□□□□□ -1.67
MSH6P52701 AC091826.1-201ENST00000514065 313 ntBASIC4.62□□□□□ -1.67
MSH6P52701 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.62□□□□□ -1.67
MSH6P52701 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC4.62□□□□□ -1.67
MSH6P52701 AP005212.4-201ENST00000614206 710 ntBASIC4.62□□□□□ -1.67
MSH6P52701 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC4.62□□□□□ -1.67
MSH6P52701 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.62□□□□□ -1.67
MSH6P52701 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.62□□□□□ -1.67
MSH6P52701 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.61□□□□□ -1.67
MSH6P52701 OR5BR1P-201ENST00000524992 1330 ntBASIC4.61□□□□□ -1.67
MSH6P52701 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
MSH6P52701 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
MSH6P52701 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.61□□□□□ -1.67
MSH6P52701 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
MSH6P52701 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC4.61□□□□□ -1.67
MSH6P52701 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
MSH6P52701 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
MSH6P52701 MIR1261-201ENST00000408659 82 ntBASIC4.61□□□□□ -1.67
MSH6P52701 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC4.61□□□□□ -1.67
MSH6P52701 VWA8P1-201ENST00000510889 176 ntBASIC4.61□□□□□ -1.67
MSH6P52701 COX6B1P6-201ENST00000522347 255 ntBASIC4.61□□□□□ -1.67
MSH6P52701 GTF3AP2-201ENST00000557014 266 ntBASIC4.61□□□□□ -1.67
MSH6P52701 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.61□□□□□ -1.67
MSH6P52701 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4.61□□□□□ -1.67
MSH6P52701 AC010615.3-201ENST00000597319 394 ntBASIC4.61□□□□□ -1.67
MSH6P52701 AC018692.3-201ENST00000623929 123 ntBASIC4.61□□□□□ -1.67
MSH6P52701 AC012020.1-201ENST00000624541 1728 ntBASIC4.61□□□□□ -1.67
MSH6P52701 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
MSH6P52701 AC093775.1-201ENST00000624154 1868 ntBASIC4.6□□□□□ -1.67
MSH6P52701 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
MSH6P52701 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.6□□□□□ -1.67
MSH6P52701 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
MSH6P52701 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.6□□□□□ -1.67
MSH6P52701 AL606537.1-201ENST00000607258 2011 ntBASIC4.6□□□□□ -1.67
MSH6P52701 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
MSH6P52701 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
MSH6P52701 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
MSH6P52701 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
MSH6P52701 AL445529.1-201ENST00000398713 389 ntBASIC4.6□□□□□ -1.67
MSH6P52701 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC4.6□□□□□ -1.67
MSH6P52701 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC4.6□□□□□ -1.67
MSH6P52701 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC4.6□□□□□ -1.67
MSH6P52701 HMGB1P16-201ENST00000447155 540 ntBASIC4.6□□□□□ -1.67
MSH6P52701 BX276092.4-201ENST00000452056 248 ntBASIC4.6□□□□□ -1.67
MSH6P52701 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.6□□□□□ -1.67
MSH6P52701 RPS27AP18-201ENST00000515536 459 ntBASIC4.6□□□□□ -1.67
MSH6P52701 IGLVIV-53-201ENST00000520107 367 ntBASIC4.6□□□□□ -1.67
MSH6P52701 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC4.6□□□□□ -1.67
MSH6P52701 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.6□□□□□ -1.67
MSH6P52701 AC104763.2-201ENST00000604179 382 ntBASIC4.6□□□□□ -1.67
MSH6P52701 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.6□□□□□ -1.67
MSH6P52701 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.6□□□□□ -1.67
MSH6P52701 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.6□□□□□ -1.67
MSH6P52701 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
MSH6P52701 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
MSH6P52701 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
MSH6P52701 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.6□□□□□ -1.67
MSH6P52701 SYT14P1-202ENST00000600441 1448 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms