Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 AL356968.1-201ENST00000416622 474 ntBASIC3.42□□□□□ -1.86
CENPFP49454 AC069540.1-201ENST00000446320 988 ntBASIC3.42□□□□□ -1.86
CENPFP49454 WASF1P1-201ENST00000447560 1131 ntBASIC3.42□□□□□ -1.86
CENPFP49454 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC3.42□□□□□ -1.86
CENPFP49454 RPL21P6-201ENST00000479171 504 ntBASIC3.42□□□□□ -1.86
CENPFP49454 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CENPFP49454 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.41□□□□□ -1.86
CENPFP49454 RPS12P18-201ENST00000442381 270 ntBASIC3.41□□□□□ -1.86
CENPFP49454 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.41□□□□□ -1.86
CENPFP49454 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.41□□□□□ -1.86
CENPFP49454 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.41□□□□□ -1.86
CENPFP49454 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CENPFP49454 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CENPFP49454 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
CENPFP49454 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
CENPFP49454 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CENPFP49454 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CENPFP49454 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.41□□□□□ -1.86
CENPFP49454 RAD21-204ENST00000518055 896 ntTSL 2 BASIC3.41□□□□□ -1.86
CENPFP49454 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.41□□□□□ -1.86
CENPFP49454 AL358913.1-201ENST00000554342 121 ntBASIC3.41□□□□□ -1.86
CENPFP49454 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.41□□□□□ -1.86
CENPFP49454 AC096947.1-201ENST00000603233 470 ntBASIC3.41□□□□□ -1.86
CENPFP49454 AC008638.3-201ENST00000603341 463 ntBASIC3.41□□□□□ -1.86
CENPFP49454 GMCL1P2-201ENST00000605230 823 ntBASIC3.41□□□□□ -1.86
CENPFP49454 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC3.41□□□□□ -1.86
CENPFP49454 AL356321.1-201ENST00000621360 228 ntBASIC3.41□□□□□ -1.86
CENPFP49454 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC3.41□□□□□ -1.86
CENPFP49454 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC3.41□□□□□ -1.86
CENPFP49454 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
CENPFP49454 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.4□□□□□ -1.86
CENPFP49454 AC126124.2-201ENST00000413542 321 ntBASIC3.4□□□□□ -1.86
CENPFP49454 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.4□□□□□ -1.86
CENPFP49454 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.4□□□□□ -1.86
CENPFP49454 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.4□□□□□ -1.86
CENPFP49454 AL049874.4-201ENST00000557593 255 ntBASIC3.4□□□□□ -1.86
CENPFP49454 AC011266.1-201ENST00000624119 3569 ntBASIC3.4□□□□□ -1.86
CENPFP49454 AC006484.1-201ENST00000435086 1884 ntBASIC3.4□□□□□ -1.86
CENPFP49454 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC3.4□□□□□ -1.86
CENPFP49454 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.4□□□□□ -1.86
CENPFP49454 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.4□□□□□ -1.86
CENPFP49454 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
CENPFP49454 OR5BR1P-201ENST00000524992 1330 ntBASIC3.4□□□□□ -1.86
CENPFP49454 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.4□□□□□ -1.87
CENPFP49454 SNORD15B-201ENST00000384714 146 ntBASIC3.4□□□□□ -1.87
CENPFP49454 RPS21P8-201ENST00000413365 247 ntBASIC3.4□□□□□ -1.87
CENPFP49454 AL139415.2-201ENST00000431968 163 ntBASIC3.4□□□□□ -1.87
CENPFP49454 YWHAQP9-201ENST00000445891 512 ntBASIC3.4□□□□□ -1.87
CENPFP49454 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.4□□□□□ -1.87
CENPFP49454 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC3.4□□□□□ -1.87
CENPFP49454 AC021205.1-201ENST00000468797 348 ntBASIC3.4□□□□□ -1.87
CENPFP49454 AC114967.1-201ENST00000504890 259 ntBASIC3.4□□□□□ -1.87
CENPFP49454 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.4□□□□□ -1.87
CENPFP49454 AC007566.2-201ENST00000603642 413 ntBASIC3.4□□□□□ -1.87
CENPFP49454 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC3.4□□□□□ -1.87
CENPFP49454 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CENPFP49454 AC004972.1-201ENST00000623934 2209 ntBASIC3.4□□□□□ -1.87
CENPFP49454 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CENPFP49454 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.4□□□□□ -1.87
CENPFP49454 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.4□□□□□ -1.87
CENPFP49454 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.4□□□□□ -1.87
CENPFP49454 AC093524.1-201ENST00000564266 1094 ntBASIC3.4□□□□□ -1.87
CENPFP49454 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.4□□□□□ -1.87
CENPFP49454 LSM1P2-201ENST00000604911 322 ntBASIC3.4□□□□□ -1.87
CENPFP49454 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
CENPFP49454 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CENPFP49454 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC3.39□□□□□ -1.87
CENPFP49454 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CENPFP49454 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.39□□□□□ -1.87
CENPFP49454 AC018529.3-201ENST00000624212 2254 ntBASIC3.39□□□□□ -1.87
CENPFP49454 AL645937.1-202ENST00000421799 937 ntBASIC3.39□□□□□ -1.87
CENPFP49454 EEF1B2P7-201ENST00000451177 676 ntBASIC3.39□□□□□ -1.87
CENPFP49454 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.39□□□□□ -1.87
CENPFP49454 ARL4AP1-201ENST00000503220 705 ntBASIC3.39□□□□□ -1.87
CENPFP49454 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.39□□□□□ -1.87
CENPFP49454 AL356274.1-201ENST00000617064 410 ntBASIC3.39□□□□□ -1.87
CENPFP49454 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CENPFP49454 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.39□□□□□ -1.87
CENPFP49454 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.39□□□□□ -1.87
CENPFP49454 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.39□□□□□ -1.87
CENPFP49454 AP000936.2-201ENST00000447151 681 ntBASIC3.39□□□□□ -1.87
CENPFP49454 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
CENPFP49454 SEPT14P1-201ENST00000458703 648 ntBASIC3.39□□□□□ -1.87
CENPFP49454 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.39□□□□□ -1.87
CENPFP49454 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.39□□□□□ -1.87
CENPFP49454 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.39□□□□□ -1.87
CENPFP49454 AC007318.2-201ENST00000620999 243 ntBASIC3.39□□□□□ -1.87
CENPFP49454 PLCE1P1-201ENST00000622094 305 ntBASIC3.39□□□□□ -1.87
CENPFP49454 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.39□□□□□ -1.87
CENPFP49454 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
CENPFP49454 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.39□□□□□ -1.87
CENPFP49454 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
CENPFP49454 AC112492.1-201ENST00000449607 712 ntBASIC3.38□□□□□ -1.87
CENPFP49454 AC021205.2-201ENST00000480069 347 ntBASIC3.38□□□□□ -1.87
CENPFP49454 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
CENPFP49454 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
CENPFP49454 AL450338.1-201ENST00000407987 512 ntBASIC3.38□□□□□ -1.87
CENPFP49454 MIR1287-201ENST00000408492 90 ntBASIC3.38□□□□□ -1.87
CENPFP49454 AC007563.3-201ENST00000433233 371 ntBASIC3.38□□□□□ -1.87
CENPFP49454 ELOCP23-201ENST00000452014 332 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 131.7 ms