Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 IPMKP1-201ENST00000425988 855 ntBASIC4.19□□□□□ -1.74
LHX1P48742 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.19□□□□□ -1.74
LHX1P48742 HMGB1P37-201ENST00000439613 609 ntBASIC4.19□□□□□ -1.74
LHX1P48742 RPS29P7-201ENST00000439662 171 ntBASIC4.19□□□□□ -1.74
LHX1P48742 AL645638.1-201ENST00000440519 361 ntBASIC4.19□□□□□ -1.74
LHX1P48742 MTCO1P53-201ENST00000441633 699 ntBASIC4.19□□□□□ -1.74
LHX1P48742 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.19□□□□□ -1.74
LHX1P48742 AL359073.1-201ENST00000448036 403 ntBASIC4.19□□□□□ -1.74
LHX1P48742 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC4.19□□□□□ -1.74
LHX1P48742 IFNWP4-201ENST00000453148 294 ntBASIC4.19□□□□□ -1.74
LHX1P48742 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.19□□□□□ -1.74
LHX1P48742 AC126121.1-201ENST00000482313 553 ntBASIC4.19□□□□□ -1.74
LHX1P48742 AL139099.1-201ENST00000497398 403 ntBASIC4.19□□□□□ -1.74
LHX1P48742 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
LHX1P48742 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.19□□□□□ -1.74
LHX1P48742 AC118282.2-201ENST00000508739 374 ntBASIC4.19□□□□□ -1.74
LHX1P48742 AC093752.1-206ENST00000511823 336 ntBASIC4.19□□□□□ -1.74
LHX1P48742 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC4.19□□□□□ -1.74
LHX1P48742 MTND4LP31-201ENST00000514859 294 ntBASIC4.19□□□□□ -1.74
LHX1P48742 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
LHX1P48742 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.19□□□□□ -1.74
LHX1P48742 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
LHX1P48742 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.19□□□□□ -1.74
LHX1P48742 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.19□□□□□ -1.74
LHX1P48742 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.19□□□□□ -1.74
LHX1P48742 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.19□□□□□ -1.74
LHX1P48742 GNRHR2P1-201ENST00000555315 631 ntBASIC4.19□□□□□ -1.74
LHX1P48742 HSPE1P5-201ENST00000561489 272 ntBASIC4.19□□□□□ -1.74
LHX1P48742 MIR4509-3-201ENST00000578671 94 ntBASIC4.19□□□□□ -1.74
LHX1P48742 MIR5685-201ENST00000579080 79 ntBASIC4.19□□□□□ -1.74
LHX1P48742 AC090312.1-201ENST00000580637 348 ntBASIC4.19□□□□□ -1.74
LHX1P48742 MIR4509-2-201ENST00000583920 94 ntBASIC4.19□□□□□ -1.74
LHX1P48742 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.19□□□□□ -1.74
LHX1P48742 AL392112.1-201ENST00000605115 829 ntBASIC4.19□□□□□ -1.74
LHX1P48742 AL109618.2-201ENST00000605527 211 ntBASIC4.19□□□□□ -1.74
LHX1P48742 AC099669.2-201ENST00000616549 437 ntBASIC4.19□□□□□ -1.74
LHX1P48742 MIR4509-1-201ENST00000618224 94 ntBASIC4.19□□□□□ -1.74
LHX1P48742 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.19□□□□□ -1.74
LHX1P48742 OR4G3P-201ENST00000633500 913 ntBASIC4.19□□□□□ -1.74
LHX1P48742 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
LHX1P48742 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
LHX1P48742 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.19□□□□□ -1.74
LHX1P48742 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.19□□□□□ -1.74
LHX1P48742 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.18□□□□□ -1.74
LHX1P48742 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
LHX1P48742 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
LHX1P48742 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.18□□□□□ -1.74
LHX1P48742 AC016716.1-201ENST00000265882 708 ntBASIC4.18□□□□□ -1.74
LHX1P48742 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
LHX1P48742 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
LHX1P48742 AC019155.1-201ENST00000382242 574 ntBASIC4.18□□□□□ -1.74
LHX1P48742 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.18□□□□□ -1.74
LHX1P48742 AC025750.1-201ENST00000399891 379 ntBASIC4.18□□□□□ -1.74
LHX1P48742 ZNF602P-201ENST00000405929 924 ntBASIC4.18□□□□□ -1.74
LHX1P48742 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.18□□□□□ -1.74
LHX1P48742 SNORA3.3-201ENST00000408712 125 ntBASIC4.18□□□□□ -1.74
LHX1P48742 OR51A3P-201ENST00000413596 924 ntBASIC4.18□□□□□ -1.74
LHX1P48742 RPL36AP36-201ENST00000418616 301 ntBASIC4.18□□□□□ -1.74
LHX1P48742 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.18□□□□□ -1.74
LHX1P48742 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.18□□□□□ -1.74
LHX1P48742 AC105402.2-201ENST00000438503 358 ntBASIC4.18□□□□□ -1.74
LHX1P48742 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC4.18□□□□□ -1.74
LHX1P48742 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.18□□□□□ -1.74
LHX1P48742 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
LHX1P48742 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.18□□□□□ -1.74
LHX1P48742 AC133473.1-201ENST00000455173 299 ntBASIC4.18□□□□□ -1.74
LHX1P48742 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.18□□□□□ -1.74
LHX1P48742 WDR78-207ENST00000488333 613 ntTSL 3 BASIC4.18□□□□□ -1.74
LHX1P48742 AC087369.1-201ENST00000520775 996 ntBASIC4.18□□□□□ -1.74
LHX1P48742 HIGD1AP6-201ENST00000521833 279 ntBASIC4.18□□□□□ -1.74
LHX1P48742 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.18□□□□□ -1.74
LHX1P48742 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.18□□□□□ -1.74
LHX1P48742 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.18□□□□□ -1.74
LHX1P48742 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.18□□□□□ -1.74
LHX1P48742 AC004217.3-201ENST00000551552 878 ntBASIC4.18□□□□□ -1.74
LHX1P48742 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.18□□□□□ -1.74
LHX1P48742 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.18□□□□□ -1.74
LHX1P48742 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.18□□□□□ -1.74
LHX1P48742 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
LHX1P48742 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC4.18□□□□□ -1.74
LHX1P48742 AC015726.1-201ENST00000602353 681 ntBASIC4.18□□□□□ -1.74
LHX1P48742 AP004247.3-201ENST00000608682 624 ntBASIC4.18□□□□□ -1.74
LHX1P48742 AP000238.1-201ENST00000608759 426 ntBASIC4.18□□□□□ -1.74
LHX1P48742 AP000255.1-201ENST00000610276 676 ntBASIC4.18□□□□□ -1.74
LHX1P48742 AC109454.4-201ENST00000623411 649 ntBASIC4.18□□□□□ -1.74
LHX1P48742 AC104985.3-201ENST00000623479 597 ntBASIC4.18□□□□□ -1.74
LHX1P48742 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.18□□□□□ -1.74
LHX1P48742 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
LHX1P48742 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.18□□□□□ -1.74
LHX1P48742 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
LHX1P48742 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
LHX1P48742 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
LHX1P48742 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
LHX1P48742 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
LHX1P48742 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.17□□□□□ -1.74
LHX1P48742 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.17□□□□□ -1.74
LHX1P48742 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
LHX1P48742 AC106754.1-201ENST00000562632 1513 ntBASIC4.17□□□□□ -1.74
LHX1P48742 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.17□□□□□ -1.74
LHX1P48742 XPOTP1-201ENST00000443317 2398 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms