Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.52□□□□□ -1.69
PTPN9P43378 NF1P5-201ENST00000588287 448 ntBASIC4.52□□□□□ -1.69
PTPN9P43378 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.52□□□□□ -1.69
PTPN9P43378 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.52□□□□□ -1.69
PTPN9P43378 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.52□□□□□ -1.69
PTPN9P43378 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC4.52□□□□□ -1.69
PTPN9P43378 VN1R82P-201ENST00000601481 356 ntBASIC4.52□□□□□ -1.69
PTPN9P43378 AC068790.4-201ENST00000602474 263 ntBASIC4.52□□□□□ -1.69
PTPN9P43378 AL353778.1-201ENST00000603149 408 ntBASIC4.52□□□□□ -1.69
PTPN9P43378 AL354984.3-201ENST00000604803 325 ntBASIC4.52□□□□□ -1.69
PTPN9P43378 AL592221.1-201ENST00000605266 382 ntBASIC4.52□□□□□ -1.69
PTPN9P43378 AC018638.7-201ENST00000605836 1114 ntBASIC4.52□□□□□ -1.69
PTPN9P43378 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.52□□□□□ -1.69
PTPN9P43378 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.52□□□□□ -1.69
PTPN9P43378 AL354760.1-201ENST00000608357 643 ntBASIC4.52□□□□□ -1.69
PTPN9P43378 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PTPN9P43378 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC4.52□□□□□ -1.69
PTPN9P43378 MIR7154-201ENST00000620673 73 ntBASIC4.52□□□□□ -1.69
PTPN9P43378 AC067852.7-201ENST00000623270 535 ntBASIC4.52□□□□□ -1.69
PTPN9P43378 CU459211.1-201ENST00000635667 749 ntBASIC4.52□□□□□ -1.69
PTPN9P43378 MKKS-204ENST00000639674 192 ntBASIC4.52□□□□□ -1.69
PTPN9P43378 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.52□□□□□ -1.69
PTPN9P43378 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
PTPN9P43378 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PTPN9P43378 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.52□□□□□ -1.69
PTPN9P43378 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
PTPN9P43378 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.52□□□□□ -1.69
PTPN9P43378 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
PTPN9P43378 AC068254.2-201ENST00000623938 3577 ntBASIC4.52□□□□□ -1.69
PTPN9P43378 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
PTPN9P43378 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
PTPN9P43378 AC007390.2-201ENST00000606229 3803 ntBASIC4.51□□□□□ -1.69
PTPN9P43378 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.51□□□□□ -1.69
PTPN9P43378 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.51□□□□□ -1.69
PTPN9P43378 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.51□□□□□ -1.69
PTPN9P43378 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.51□□□□□ -1.69
PTPN9P43378 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
PTPN9P43378 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
PTPN9P43378 AC005539.1-201ENST00000443768 1479 ntBASIC4.51□□□□□ -1.69
PTPN9P43378 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.51□□□□□ -1.69
PTPN9P43378 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PTPN9P43378 OR5H2-201ENST00000355273 945 ntBASIC4.51□□□□□ -1.69
PTPN9P43378 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
PTPN9P43378 RNU6-115P-201ENST00000364310 107 ntBASIC4.51□□□□□ -1.69
PTPN9P43378 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.51□□□□□ -1.69
PTPN9P43378 HNRNPDP2-201ENST00000406475 478 ntBASIC4.51□□□□□ -1.69
PTPN9P43378 RPL31P52-201ENST00000407532 367 ntBASIC4.51□□□□□ -1.69
PTPN9P43378 RAP1BP1-201ENST00000412709 553 ntBASIC4.51□□□□□ -1.69
PTPN9P43378 LUZP4P1-201ENST00000415420 344 ntBASIC4.51□□□□□ -1.69
PTPN9P43378 AL590609.2-201ENST00000421430 368 ntBASIC4.51□□□□□ -1.69
PTPN9P43378 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.51□□□□□ -1.69
PTPN9P43378 RBMY1KP-201ENST00000423480 476 ntBASIC4.51□□□□□ -1.69
PTPN9P43378 ATP5F1P1-201ENST00000433775 569 ntBASIC4.51□□□□□ -1.69
PTPN9P43378 AC241584.1-201ENST00000438469 1241 ntBASIC4.51□□□□□ -1.69
PTPN9P43378 RPL23AP52-201ENST00000439311 478 ntBASIC4.51□□□□□ -1.69
PTPN9P43378 MTND3P1-201ENST00000441336 220 ntBASIC4.51□□□□□ -1.69
PTPN9P43378 CEACAMP9-201ENST00000442990 513 ntBASIC4.51□□□□□ -1.69
PTPN9P43378 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.51□□□□□ -1.69
PTPN9P43378 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC4.51□□□□□ -1.69
PTPN9P43378 HMGN3P1-201ENST00000453847 193 ntBASIC4.51□□□□□ -1.69
PTPN9P43378 FGF7P3-201ENST00000454645 303 ntBASIC4.51□□□□□ -1.69
PTPN9P43378 AC133473.1-201ENST00000455173 299 ntBASIC4.51□□□□□ -1.69
PTPN9P43378 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC4.51□□□□□ -1.69
PTPN9P43378 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.51□□□□□ -1.69
PTPN9P43378 MTND6P6-201ENST00000478031 263 ntBASIC4.51□□□□□ -1.69
PTPN9P43378 AC013356.1-201ENST00000489027 564 ntBASIC4.51□□□□□ -1.69
PTPN9P43378 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC4.51□□□□□ -1.69
PTPN9P43378 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC4.51□□□□□ -1.69
PTPN9P43378 AC010486.2-201ENST00000505572 483 ntBASIC4.51□□□□□ -1.69
PTPN9P43378 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.51□□□□□ -1.69
PTPN9P43378 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.51□□□□□ -1.69
PTPN9P43378 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.51□□□□□ -1.69
PTPN9P43378 MTND1P22-201ENST00000510572 951 ntBASIC4.51□□□□□ -1.69
PTPN9P43378 MRPS33P3-201ENST00000513456 322 ntBASIC4.51□□□□□ -1.69
PTPN9P43378 RN7SKP31-201ENST00000516354 278 ntBASIC4.51□□□□□ -1.69
PTPN9P43378 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC4.51□□□□□ -1.69
PTPN9P43378 ARL2BPP5-201ENST00000523141 481 ntBASIC4.51□□□□□ -1.69
PTPN9P43378 AP001189.2-201ENST00000527320 189 ntBASIC4.51□□□□□ -1.69
PTPN9P43378 AL109766.1-201ENST00000555080 552 ntBASIC4.51□□□□□ -1.69
PTPN9P43378 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.51□□□□□ -1.69
PTPN9P43378 AC008088.1-201ENST00000580993 280 ntBASIC4.51□□□□□ -1.69
PTPN9P43378 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.51□□□□□ -1.69
PTPN9P43378 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.51□□□□□ -1.69
PTPN9P43378 AC008687.2-201ENST00000597865 520 ntBASIC4.51□□□□□ -1.69
PTPN9P43378 AL356218.2-201ENST00000605264 187 ntBASIC4.51□□□□□ -1.69
PTPN9P43378 AC005332.6-201ENST00000613178 446 ntBASIC4.51□□□□□ -1.69
PTPN9P43378 SNX18P1Y-201ENST00000616231 511 ntBASIC4.51□□□□□ -1.69
PTPN9P43378 AC090246.1-201ENST00000616499 426 ntBASIC4.51□□□□□ -1.69
PTPN9P43378 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.51□□□□□ -1.69
PTPN9P43378 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.51□□□□□ -1.69
PTPN9P43378 AF001550.2-201ENST00000636643 217 ntBASIC4.51□□□□□ -1.69
PTPN9P43378 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.51□□□□□ -1.69
PTPN9P43378 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PTPN9P43378 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.51□□□□□ -1.69
PTPN9P43378 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PTPN9P43378 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PTPN9P43378 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.51□□□□□ -1.69
PTPN9P43378 AC139713.2-214ENST00000642059 1811 ntBASIC4.51□□□□□ -1.69
PTPN9P43378 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PTPN9P43378 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms