Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.71□□□□□ -1.82
FDFT1P37268 AC023161.2-201ENST00000551218 780 ntBASIC3.71□□□□□ -1.82
FDFT1P37268 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.71□□□□□ -1.82
FDFT1P37268 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.71□□□□□ -1.82
FDFT1P37268 AL356490.1-201ENST00000623079 479 ntBASIC3.71□□□□□ -1.82
FDFT1P37268 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.71□□□□□ -1.82
FDFT1P37268 FAM157B-203ENST00000639350 358 ntBASIC3.71□□□□□ -1.82
FDFT1P37268 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
FDFT1P37268 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
FDFT1P37268 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
FDFT1P37268 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
FDFT1P37268 AL353746.1-201ENST00000566293 6881 ntBASIC3.71□□□□□ -1.82
FDFT1P37268 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
FDFT1P37268 ZNF90P1-201ENST00000480493 1951 ntBASIC3.71□□□□□ -1.82
FDFT1P37268 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
FDFT1P37268 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
FDFT1P37268 MTND5P3-201ENST00000438536 1800 ntBASIC3.7□□□□□ -1.82
FDFT1P37268 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.7□□□□□ -1.82
FDFT1P37268 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
FDFT1P37268 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
FDFT1P37268 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
FDFT1P37268 RNA5SP235-201ENST00000365411 114 ntBASIC3.7□□□□□ -1.82
FDFT1P37268 HMGB1P10-201ENST00000395823 563 ntBASIC3.7□□□□□ -1.82
FDFT1P37268 RPL32P23-201ENST00000397237 405 ntBASIC3.7□□□□□ -1.82
FDFT1P37268 AL356057.1-202ENST00000402263 756 ntBASIC3.7□□□□□ -1.82
FDFT1P37268 AL590704.1-201ENST00000402856 794 ntBASIC3.7□□□□□ -1.82
FDFT1P37268 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.7□□□□□ -1.82
FDFT1P37268 ZFAND6P1-201ENST00000434138 605 ntBASIC3.7□□□□□ -1.82
FDFT1P37268 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.7□□□□□ -1.82
FDFT1P37268 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.7□□□□□ -1.82
FDFT1P37268 HMGB1P48-201ENST00000446155 598 ntBASIC3.7□□□□□ -1.82
FDFT1P37268 RPL23AP14-201ENST00000468281 468 ntBASIC3.7□□□□□ -1.82
FDFT1P37268 HESX1-202ENST00000473921 757 ntTSL 5 BASIC3.7□□□□□ -1.82
FDFT1P37268 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.7□□□□□ -1.82
FDFT1P37268 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.7□□□□□ -1.82
FDFT1P37268 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
FDFT1P37268 ARL2BPP6-201ENST00000512757 439 ntBASIC3.7□□□□□ -1.82
FDFT1P37268 AC093853.1-201ENST00000515689 483 ntBASIC3.7□□□□□ -1.82
FDFT1P37268 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
FDFT1P37268 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.7□□□□□ -1.82
FDFT1P37268 RN7SL703P-201ENST00000578485 302 ntBASIC3.7□□□□□ -1.82
FDFT1P37268 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.7□□□□□ -1.82
FDFT1P37268 MIR4425-201ENST00000580572 84 ntBASIC3.7□□□□□ -1.82
FDFT1P37268 AC018618.2-201ENST00000604770 446 ntBASIC3.7□□□□□ -1.82
FDFT1P37268 AC092653.1-201ENST00000608509 531 ntBASIC3.7□□□□□ -1.82
FDFT1P37268 AC090912.3-201ENST00000609775 533 ntBASIC3.7□□□□□ -1.82
FDFT1P37268 MIR4496-201ENST00000635896 61 ntBASIC3.7□□□□□ -1.82
FDFT1P37268 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
FDFT1P37268 AC011978.2-201ENST00000569835 2054 ntBASIC3.7□□□□□ -1.82
FDFT1P37268 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
FDFT1P37268 XPOTP1-201ENST00000443317 2398 ntBASIC3.7□□□□□ -1.82
FDFT1P37268 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.7□□□□□ -1.82
FDFT1P37268 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
FDFT1P37268 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
FDFT1P37268 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
FDFT1P37268 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
FDFT1P37268 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
FDFT1P37268 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
FDFT1P37268 ASNSP1-204ENST00000641977 1664 ntBASIC3.69□□□□□ -1.82
FDFT1P37268 OR4A15-201ENST00000314706 1035 ntBASIC3.69□□□□□ -1.82
FDFT1P37268 RNU6-1293P-201ENST00000384077 107 ntBASIC3.69□□□□□ -1.82
FDFT1P37268 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
FDFT1P37268 U3.39-201ENST00000408569 239 ntBASIC3.69□□□□□ -1.82
FDFT1P37268 RN7SKP156-201ENST00000410308 342 ntBASIC3.69□□□□□ -1.82
FDFT1P37268 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.69□□□□□ -1.82
FDFT1P37268 AC245054.1-201ENST00000420944 258 ntBASIC3.69□□□□□ -1.82
FDFT1P37268 OR4F13P-201ENST00000428478 931 ntBASIC3.69□□□□□ -1.82
FDFT1P37268 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
FDFT1P37268 AC074367.1-201ENST00000438685 1125 ntBASIC3.69□□□□□ -1.82
FDFT1P37268 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.69□□□□□ -1.82
FDFT1P37268 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.69□□□□□ -1.82
FDFT1P37268 CABYRP1-201ENST00000465493 1045 ntBASIC3.69□□□□□ -1.82
FDFT1P37268 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC3.69□□□□□ -1.82
FDFT1P37268 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.69□□□□□ -1.82
FDFT1P37268 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.69□□□□□ -1.82
FDFT1P37268 PCBP2P3-201ENST00000509726 843 ntBASIC3.69□□□□□ -1.82
FDFT1P37268 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.69□□□□□ -1.82
FDFT1P37268 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.69□□□□□ -1.82
FDFT1P37268 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.69□□□□□ -1.82
FDFT1P37268 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.69□□□□□ -1.82
FDFT1P37268 MTCO1P30-201ENST00000515244 580 ntBASIC3.69□□□□□ -1.82
FDFT1P37268 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.69□□□□□ -1.82
FDFT1P37268 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
FDFT1P37268 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC3.69□□□□□ -1.82
FDFT1P37268 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.69□□□□□ -1.82
FDFT1P37268 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.69□□□□□ -1.82
FDFT1P37268 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC3.69□□□□□ -1.82
FDFT1P37268 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC3.69□□□□□ -1.82
FDFT1P37268 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
FDFT1P37268 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.69□□□□□ -1.82
FDFT1P37268 AC006077.1-201ENST00000604746 343 ntBASIC3.69□□□□□ -1.82
FDFT1P37268 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.69□□□□□ -1.82
FDFT1P37268 RNU6-156P-201ENST00000621869 107 ntBASIC3.69□□□□□ -1.82
FDFT1P37268 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.69□□□□□ -1.82
FDFT1P37268 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.69□□□□□ -1.82
FDFT1P37268 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
FDFT1P37268 AC026951.1-201ENST00000559530 2459 ntBASIC3.69□□□□□ -1.82
FDFT1P37268 PWAR6-201ENST00000552334 4618 ntBASIC3.69□□□□□ -1.82
FDFT1P37268 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
FDFT1P37268 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 219.1 ms