Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HMGCLP35914 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HMGCLP35914 RNU6-98P-201ENST00000384173 107 ntBASIC3.79□□□□□ -1.8
HMGCLP35914 MIR30B-201ENST00000384850 88 ntBASIC3.79□□□□□ -1.8
HMGCLP35914 MIR124-3-201ENST00000384866 87 ntBASIC3.79□□□□□ -1.8
HMGCLP35914 AP002784.2-201ENST00000397300 549 ntBASIC3.79□□□□□ -1.8
HMGCLP35914 FABP12P1-201ENST00000401911 322 ntBASIC3.79□□□□□ -1.8
HMGCLP35914 VTA1P1-201ENST00000414044 866 ntBASIC3.79□□□□□ -1.8
HMGCLP35914 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC3.79□□□□□ -1.8
HMGCLP35914 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.79□□□□□ -1.8
HMGCLP35914 AC009965.2-201ENST00000425328 970 ntBASIC3.79□□□□□ -1.8
HMGCLP35914 AL591419.1-201ENST00000427423 339 ntBASIC3.79□□□□□ -1.8
HMGCLP35914 AC093422.3-201ENST00000428506 305 ntBASIC3.79□□□□□ -1.8
HMGCLP35914 FO393419.3-201ENST00000428741 282 ntBASIC3.79□□□□□ -1.8
HMGCLP35914 TRBV26OR9-2-201ENST00000432077 293 ntBASIC3.79□□□□□ -1.8
HMGCLP35914 BMS1P19-201ENST00000433925 393 ntBASIC3.79□□□□□ -1.8
HMGCLP35914 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC3.79□□□□□ -1.8
HMGCLP35914 SNORA71B-202ENST00000439232 272 ntBASIC3.79□□□□□ -1.8
HMGCLP35914 RPS29P7-201ENST00000439662 171 ntBASIC3.79□□□□□ -1.8
HMGCLP35914 AC092809.1-201ENST00000441469 474 ntBASIC3.79□□□□□ -1.8
HMGCLP35914 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.79□□□□□ -1.8
HMGCLP35914 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.79□□□□□ -1.8
HMGCLP35914 HMGN2P7-201ENST00000456186 273 ntBASIC3.79□□□□□ -1.8
HMGCLP35914 GTF2IP12-201ENST00000456547 356 ntBASIC3.79□□□□□ -1.8
HMGCLP35914 FCF1P6-201ENST00000456841 595 ntBASIC3.79□□□□□ -1.8
HMGCLP35914 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.79□□□□□ -1.8
HMGCLP35914 RNU7-27P-201ENST00000459281 62 ntBASIC3.79□□□□□ -1.8
HMGCLP35914 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.79□□□□□ -1.8
HMGCLP35914 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC3.79□□□□□ -1.8
HMGCLP35914 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.79□□□□□ -1.8
HMGCLP35914 AC022695.1-201ENST00000522089 237 ntBASIC3.79□□□□□ -1.8
HMGCLP35914 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.79□□□□□ -1.8
HMGCLP35914 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.79□□□□□ -1.8
HMGCLP35914 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.79□□□□□ -1.8
HMGCLP35914 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.79□□□□□ -1.8
HMGCLP35914 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.79□□□□□ -1.8
HMGCLP35914 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.79□□□□□ -1.8
HMGCLP35914 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.79□□□□□ -1.8
HMGCLP35914 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.79□□□□□ -1.8
HMGCLP35914 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.79□□□□□ -1.8
HMGCLP35914 HSPE1P5-201ENST00000561489 272 ntBASIC3.79□□□□□ -1.8
HMGCLP35914 BNIP3P5-201ENST00000562290 498 ntBASIC3.79□□□□□ -1.8
HMGCLP35914 MIR5685-201ENST00000579080 79 ntBASIC3.79□□□□□ -1.8
HMGCLP35914 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.79□□□□□ -1.8
HMGCLP35914 AC012254.4-201ENST00000588843 273 ntBASIC3.79□□□□□ -1.8
HMGCLP35914 EIF1P6-201ENST00000600054 334 ntBASIC3.79□□□□□ -1.8
HMGCLP35914 AC068620.3-201ENST00000602749 560 ntBASIC3.79□□□□□ -1.8
HMGCLP35914 AC011458.1-201ENST00000604034 617 ntBASIC3.79□□□□□ -1.8
HMGCLP35914 SNORA62.6-201ENST00000606322 83 ntBASIC3.79□□□□□ -1.8
HMGCLP35914 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.79□□□□□ -1.8
HMGCLP35914 AP000240.1-201ENST00000609910 452 ntBASIC3.79□□□□□ -1.8
HMGCLP35914 AC005344.1-201ENST00000613391 459 ntBASIC3.79□□□□□ -1.8
HMGCLP35914 AC078880.5-201ENST00000617845 421 ntBASIC3.79□□□□□ -1.8
HMGCLP35914 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.79□□□□□ -1.8
HMGCLP35914 AC090772.4-201ENST00000623599 362 ntBASIC3.79□□□□□ -1.8
HMGCLP35914 AL590396.2-201ENST00000636511 1041 ntBASIC3.79□□□□□ -1.8
HMGCLP35914 AC025125.1-201ENST00000624743 1922 ntBASIC3.79□□□□□ -1.8
HMGCLP35914 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
HMGCLP35914 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
HMGCLP35914 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HMGCLP35914 AP004289.2-201ENST00000444413 1457 ntBASIC3.79□□□□□ -1.8
HMGCLP35914 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HMGCLP35914 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.78□□□□□ -1.8
HMGCLP35914 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
HMGCLP35914 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HMGCLP35914 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
HMGCLP35914 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HMGCLP35914 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HMGCLP35914 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HMGCLP35914 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HMGCLP35914 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
HMGCLP35914 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.78□□□□□ -1.8
HMGCLP35914 UBE2V1P9-201ENST00000414760 368 ntBASIC3.78□□□□□ -1.8
HMGCLP35914 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.78□□□□□ -1.8
HMGCLP35914 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.78□□□□□ -1.8
HMGCLP35914 RPL30P3-201ENST00000424262 333 ntBASIC3.78□□□□□ -1.8
HMGCLP35914 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HMGCLP35914 RPL7P2-201ENST00000427639 268 ntBASIC3.78□□□□□ -1.8
HMGCLP35914 HIGD1AP12-201ENST00000427832 281 ntBASIC3.78□□□□□ -1.8
HMGCLP35914 AC017083.1-201ENST00000428093 483 ntBASIC3.78□□□□□ -1.8
HMGCLP35914 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.78□□□□□ -1.8
HMGCLP35914 AL365396.1-201ENST00000430854 671 ntBASIC3.78□□□□□ -1.8
HMGCLP35914 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.78□□□□□ -1.8
HMGCLP35914 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.78□□□□□ -1.8
HMGCLP35914 SETD6P1-201ENST00000444575 317 ntBASIC3.78□□□□□ -1.8
HMGCLP35914 ARL5AP2-201ENST00000444698 533 ntBASIC3.78□□□□□ -1.8
HMGCLP35914 AC006480.1-201ENST00000449887 378 ntBASIC3.78□□□□□ -1.8
HMGCLP35914 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.78□□□□□ -1.8
HMGCLP35914 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.78□□□□□ -1.8
HMGCLP35914 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
HMGCLP35914 RPS17P11-201ENST00000474297 293 ntBASIC3.78□□□□□ -1.8
HMGCLP35914 GAPDHP36-201ENST00000480688 918 ntBASIC3.78□□□□□ -1.8
HMGCLP35914 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.78□□□□□ -1.8
HMGCLP35914 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.78□□□□□ -1.8
HMGCLP35914 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HMGCLP35914 AC010342.1-201ENST00000514047 877 ntBASIC3.78□□□□□ -1.8
HMGCLP35914 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.78□□□□□ -1.8
HMGCLP35914 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.78□□□□□ -1.8
HMGCLP35914 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HMGCLP35914 AP003717.3-201ENST00000544832 1180 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 161.7 ms