Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.77□□□□□ -1.65
CIITAP33076 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.77□□□□□ -1.65
CIITAP33076 AL445567.1-201ENST00000439121 144 ntBASIC4.77□□□□□ -1.65
CIITAP33076 AC002542.1-201ENST00000440683 193 ntBASIC4.77□□□□□ -1.65
CIITAP33076 AC009263.1-201ENST00000441193 1239 ntBASIC4.77□□□□□ -1.65
CIITAP33076 TPTE2P6-202ENST00000445572 1007 ntBASIC4.77□□□□□ -1.65
CIITAP33076 DNAJC19P8-201ENST00000452887 259 ntBASIC4.77□□□□□ -1.65
CIITAP33076 IFNWP4-201ENST00000453148 294 ntBASIC4.77□□□□□ -1.65
CIITAP33076 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.77□□□□□ -1.65
CIITAP33076 RPL7P19-201ENST00000469948 618 ntBASIC4.77□□□□□ -1.65
CIITAP33076 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
CIITAP33076 TRBV8-2-201ENST00000475637 270 ntBASIC4.77□□□□□ -1.65
CIITAP33076 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.77□□□□□ -1.65
CIITAP33076 AC134698.5-201ENST00000519444 336 ntBASIC4.77□□□□□ -1.65
CIITAP33076 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC4.77□□□□□ -1.65
CIITAP33076 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.77□□□□□ -1.65
CIITAP33076 AC008562.1-201ENST00000521763 330 ntBASIC4.77□□□□□ -1.65
CIITAP33076 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CIITAP33076 AC105233.3-201ENST00000531125 744 ntBASIC4.77□□□□□ -1.65
CIITAP33076 PDCL2P2-201ENST00000533651 189 ntBASIC4.77□□□□□ -1.65
CIITAP33076 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.77□□□□□ -1.65
CIITAP33076 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.77□□□□□ -1.65
CIITAP33076 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.77□□□□□ -1.65
CIITAP33076 AC233280.2-201ENST00000603917 1070 ntBASIC4.77□□□□□ -1.65
CIITAP33076 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
CIITAP33076 AC009090.3-201ENST00000616553 565 ntBASIC4.77□□□□□ -1.65
CIITAP33076 AP003072.4-201ENST00000624580 310 ntBASIC4.77□□□□□ -1.65
CIITAP33076 AC016717.3-201ENST00000624730 554 ntBASIC4.77□□□□□ -1.65
CIITAP33076 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.77□□□□□ -1.65
CIITAP33076 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.77□□□□□ -1.65
CIITAP33076 AC103706.2-201ENST00000638080 240 ntBASIC4.77□□□□□ -1.65
CIITAP33076 MFSD8-245ENST00000641743 948 ntBASIC4.77□□□□□ -1.65
CIITAP33076 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CIITAP33076 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.77□□□□□ -1.65
CIITAP33076 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.77□□□□□ -1.65
CIITAP33076 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
CIITAP33076 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CIITAP33076 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CIITAP33076 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
CIITAP33076 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CIITAP33076 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.76□□□□□ -1.65
CIITAP33076 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CIITAP33076 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CIITAP33076 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.76□□□□□ -1.65
CIITAP33076 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CIITAP33076 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CIITAP33076 FAM133CP-201ENST00000332869 704 ntBASIC4.76□□□□□ -1.65
CIITAP33076 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.76□□□□□ -1.65
CIITAP33076 RNU6-707P-201ENST00000364647 95 ntBASIC4.76□□□□□ -1.65
CIITAP33076 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CIITAP33076 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.76□□□□□ -1.65
CIITAP33076 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CIITAP33076 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.76□□□□□ -1.65
CIITAP33076 AL356131.1-201ENST00000405826 414 ntBASIC4.76□□□□□ -1.65
CIITAP33076 HDGFP1-201ENST00000405943 252 ntBASIC4.76□□□□□ -1.65
CIITAP33076 CYCSP10-201ENST00000417973 294 ntBASIC4.76□□□□□ -1.65
CIITAP33076 PTP4A1P5-201ENST00000420305 455 ntBASIC4.76□□□□□ -1.65
CIITAP33076 USP9YP26-201ENST00000421008 661 ntBASIC4.76□□□□□ -1.65
CIITAP33076 DYNLL1P7-201ENST00000429273 258 ntBASIC4.76□□□□□ -1.65
CIITAP33076 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.76□□□□□ -1.65
CIITAP33076 AL365396.1-201ENST00000430854 671 ntBASIC4.76□□□□□ -1.65
CIITAP33076 PRELID3BP10-201ENST00000431957 584 ntBASIC4.76□□□□□ -1.65
CIITAP33076 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.76□□□□□ -1.65
CIITAP33076 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.76□□□□□ -1.65
CIITAP33076 MTND1P32-201ENST00000433043 938 ntBASIC4.76□□□□□ -1.65
CIITAP33076 AC234064.1-201ENST00000436312 247 ntBASIC4.76□□□□□ -1.65
CIITAP33076 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.76□□□□□ -1.65
CIITAP33076 AC092393.1-201ENST00000439625 742 ntBASIC4.76□□□□□ -1.65
CIITAP33076 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.76□□□□□ -1.65
CIITAP33076 AC073587.1-201ENST00000447093 876 ntBASIC4.76□□□□□ -1.65
CIITAP33076 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.76□□□□□ -1.65
CIITAP33076 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CIITAP33076 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.76□□□□□ -1.65
CIITAP33076 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.76□□□□□ -1.65
CIITAP33076 FABP5P12-201ENST00000515543 389 ntBASIC4.76□□□□□ -1.65
CIITAP33076 AC022790.1-201ENST00000522872 204 ntBASIC4.76□□□□□ -1.65
CIITAP33076 AC010306.1-201ENST00000523223 1117 ntBASIC4.76□□□□□ -1.65
CIITAP33076 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC4.76□□□□□ -1.65
CIITAP33076 AC124293.1-201ENST00000530034 493 ntBASIC4.76□□□□□ -1.65
CIITAP33076 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.76□□□□□ -1.65
CIITAP33076 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.76□□□□□ -1.65
CIITAP33076 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.76□□□□□ -1.65
CIITAP33076 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.76□□□□□ -1.65
CIITAP33076 AC090751.1-201ENST00000566966 267 ntBASIC4.76□□□□□ -1.65
CIITAP33076 HNRNPCP4-201ENST00000571636 900 ntBASIC4.76□□□□□ -1.65
CIITAP33076 MIR5708-201ENST00000579723 85 ntBASIC4.76□□□□□ -1.65
CIITAP33076 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.76□□□□□ -1.65
CIITAP33076 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.76□□□□□ -1.65
CIITAP33076 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.76□□□□□ -1.65
CIITAP33076 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CIITAP33076 AP000238.1-201ENST00000608759 426 ntBASIC4.76□□□□□ -1.65
CIITAP33076 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.76□□□□□ -1.65
CIITAP33076 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.76□□□□□ -1.65
CIITAP33076 AC023509.5-201ENST00000617434 807 ntBASIC4.76□□□□□ -1.65
CIITAP33076 MIR7151-201ENST00000617477 60 ntBASIC4.76□□□□□ -1.65
CIITAP33076 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.76□□□□□ -1.65
CIITAP33076 AC109454.4-201ENST00000623411 649 ntBASIC4.76□□□□□ -1.65
CIITAP33076 BMS1P21-201ENST00000634565 365 ntBASIC4.76□□□□□ -1.65
CIITAP33076 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.76□□□□□ -1.65
CIITAP33076 SAGE2P-201ENST00000420011 2126 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms