Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 USP9YP27-201ENST00000418455 438 ntBASIC4.82□□□□□ -1.64
CD40P25942 AC092832.1-201ENST00000422934 400 ntBASIC4.82□□□□□ -1.64
CD40P25942 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.82□□□□□ -1.64
CD40P25942 AC007283.2-201ENST00000424739 197 ntBASIC4.82□□□□□ -1.64
CD40P25942 MTCO1P20-201ENST00000425366 358 ntBASIC4.82□□□□□ -1.64
CD40P25942 AC006548.1-201ENST00000427470 102 ntBASIC4.82□□□□□ -1.64
CD40P25942 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.82□□□□□ -1.64
CD40P25942 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.82□□□□□ -1.64
CD40P25942 AC112653.1-201ENST00000443851 386 ntBASIC4.82□□□□□ -1.64
CD40P25942 AL136380.1-201ENST00000447970 162 ntBASIC4.82□□□□□ -1.64
CD40P25942 RPS20P24-201ENST00000457473 361 ntBASIC4.82□□□□□ -1.64
CD40P25942 OR2AO1P-201ENST00000476497 403 ntBASIC4.82□□□□□ -1.64
CD40P25942 RPL23AP41-201ENST00000484754 458 ntBASIC4.82□□□□□ -1.64
CD40P25942 AC023194.1-201ENST00000493084 308 ntBASIC4.82□□□□□ -1.64
CD40P25942 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.82□□□□□ -1.64
CD40P25942 COX7A2P2-201ENST00000505291 250 ntBASIC4.82□□□□□ -1.64
CD40P25942 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.82□□□□□ -1.64
CD40P25942 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.82□□□□□ -1.64
CD40P25942 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.82□□□□□ -1.64
CD40P25942 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.82□□□□□ -1.64
CD40P25942 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.82□□□□□ -1.64
CD40P25942 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.82□□□□□ -1.64
CD40P25942 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.82□□□□□ -1.64
CD40P25942 IGKV2-19-201ENST00000518132 283 ntBASIC4.82□□□□□ -1.64
CD40P25942 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CD40P25942 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CD40P25942 AL157687.1-201ENST00000554853 619 ntBASIC4.82□□□□□ -1.64
CD40P25942 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC4.82□□□□□ -1.64
CD40P25942 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.82□□□□□ -1.64
CD40P25942 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.82□□□□□ -1.64
CD40P25942 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.82□□□□□ -1.64
CD40P25942 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.82□□□□□ -1.64
CD40P25942 AC012507.3-201ENST00000603556 477 ntBASIC4.82□□□□□ -1.64
CD40P25942 SUMO2P15-201ENST00000604285 278 ntBASIC4.82□□□□□ -1.64
CD40P25942 AC007363.1-201ENST00000604736 620 ntBASIC4.82□□□□□ -1.64
CD40P25942 PACRG-210ENST00000611387 279 ntTSL 5 BASIC4.82□□□□□ -1.64
CD40P25942 AL118522.2-201ENST00000616045 615 ntBASIC4.82□□□□□ -1.64
CD40P25942 AC002553.4-201ENST00000616896 331 ntBASIC4.82□□□□□ -1.64
CD40P25942 MIR6837-201ENST00000620884 64 ntBASIC4.82□□□□□ -1.64
CD40P25942 CR381572.1-201ENST00000625098 102 ntBASIC4.82□□□□□ -1.64
CD40P25942 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.82□□□□□ -1.64
CD40P25942 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CD40P25942 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CD40P25942 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
CD40P25942 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CD40P25942 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CD40P25942 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CD40P25942 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
CD40P25942 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CD40P25942 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.82□□□□□ -1.64
CD40P25942 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CD40P25942 AC010928.1-201ENST00000592477 1447 ntBASIC4.81□□□□□ -1.64
CD40P25942 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CD40P25942 BCORP1-203ENST00000513194 5093 ntBASIC4.81□□□□□ -1.64
CD40P25942 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CD40P25942 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CD40P25942 AP001284.1-201ENST00000528393 2118 ntBASIC4.81□□□□□ -1.64
CD40P25942 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.81□□□□□ -1.64
CD40P25942 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CD40P25942 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CD40P25942 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC4.81□□□□□ -1.64
CD40P25942 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CD40P25942 SNORA20.2-201ENST00000383922 131 ntBASIC4.81□□□□□ -1.64
CD40P25942 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CD40P25942 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC4.81□□□□□ -1.64
CD40P25942 RPS15AP12-201ENST00000419498 388 ntBASIC4.81□□□□□ -1.64
CD40P25942 BX510359.3-201ENST00000422168 306 ntBASIC4.81□□□□□ -1.64
CD40P25942 AL355433.1-201ENST00000422804 300 ntBASIC4.81□□□□□ -1.64
CD40P25942 PSMA2P3-201ENST00000429685 675 ntBASIC4.81□□□□□ -1.64
CD40P25942 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.81□□□□□ -1.64
CD40P25942 UBE2V1P13-201ENST00000436983 439 ntBASIC4.81□□□□□ -1.64
CD40P25942 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC4.81□□□□□ -1.64
CD40P25942 DPPA3P1-201ENST00000448050 469 ntBASIC4.81□□□□□ -1.64
CD40P25942 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.81□□□□□ -1.64
CD40P25942 AC055855.1-201ENST00000489563 579 ntBASIC4.81□□□□□ -1.64
CD40P25942 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.81□□□□□ -1.64
CD40P25942 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.81□□□□□ -1.64
CD40P25942 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.81□□□□□ -1.64
CD40P25942 HIGD1AP3-201ENST00000515857 278 ntBASIC4.81□□□□□ -1.64
CD40P25942 SNORD116-26-201ENST00000516006 96 ntBASIC4.81□□□□□ -1.64
CD40P25942 RNU6-27P-201ENST00000516146 107 ntBASIC4.81□□□□□ -1.64
CD40P25942 Y_RNA.693-201ENST00000516641 110 ntBASIC4.81□□□□□ -1.64
CD40P25942 IGLV2-28-201ENST00000520681 304 ntBASIC4.81□□□□□ -1.64
CD40P25942 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.81□□□□□ -1.64
CD40P25942 AP003497.1-201ENST00000528472 562 ntBASIC4.81□□□□□ -1.64
CD40P25942 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.81□□□□□ -1.64
CD40P25942 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC4.81□□□□□ -1.64
CD40P25942 MIR3167-201ENST00000579623 85 ntBASIC4.81□□□□□ -1.64
CD40P25942 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.81□□□□□ -1.64
CD40P25942 AC067852.4-201ENST00000590314 478 ntBASIC4.81□□□□□ -1.64
CD40P25942 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
CD40P25942 FKBP1AP1-201ENST00000594588 318 ntBASIC4.81□□□□□ -1.64
CD40P25942 RPL12P25-202ENST00000598100 674 ntBASIC4.81□□□□□ -1.64
CD40P25942 AC068790.5-201ENST00000602741 355 ntBASIC4.81□□□□□ -1.64
CD40P25942 AC068790.3-201ENST00000602988 553 ntBASIC4.81□□□□□ -1.64
CD40P25942 IMMP1LP3-201ENST00000604197 224 ntBASIC4.81□□□□□ -1.64
CD40P25942 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.81□□□□□ -1.64
CD40P25942 AP006248.2-201ENST00000623309 592 ntBASIC4.81□□□□□ -1.64
CD40P25942 AC112204.3-201ENST00000623822 332 ntBASIC4.81□□□□□ -1.64
CD40P25942 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms