Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 IGBP1P4-201ENST00000503202 879 ntBASIC4.5□□□□□ -1.69
TNFSF4P23510 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.5□□□□□ -1.69
TNFSF4P23510 HIGD1AP14-201ENST00000507617 282 ntBASIC4.5□□□□□ -1.69
TNFSF4P23510 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.5□□□□□ -1.69
TNFSF4P23510 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.5□□□□□ -1.69
TNFSF4P23510 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.5□□□□□ -1.69
TNFSF4P23510 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.5□□□□□ -1.69
TNFSF4P23510 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.5□□□□□ -1.69
TNFSF4P23510 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.5□□□□□ -1.69
TNFSF4P23510 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.5□□□□□ -1.69
TNFSF4P23510 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.5□□□□□ -1.69
TNFSF4P23510 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
TNFSF4P23510 SETP7-201ENST00000552169 453 ntBASIC4.5□□□□□ -1.69
TNFSF4P23510 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.5□□□□□ -1.69
TNFSF4P23510 AP005136.1-201ENST00000579765 429 ntBASIC4.5□□□□□ -1.69
TNFSF4P23510 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.5□□□□□ -1.69
TNFSF4P23510 AC083760.1-201ENST00000589621 670 ntBASIC4.5□□□□□ -1.69
TNFSF4P23510 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
TNFSF4P23510 AC009237.13-201ENST00000603193 276 ntBASIC4.5□□□□□ -1.69
TNFSF4P23510 AC108738.1-201ENST00000603703 237 ntBASIC4.5□□□□□ -1.69
TNFSF4P23510 AC126915.2-201ENST00000610957 190 ntBASIC4.5□□□□□ -1.69
TNFSF4P23510 AC010632.3-201ENST00000611377 369 ntBASIC4.5□□□□□ -1.69
TNFSF4P23510 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.5□□□□□ -1.69
TNFSF4P23510 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.5□□□□□ -1.69
TNFSF4P23510 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
TNFSF4P23510 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
TNFSF4P23510 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.5□□□□□ -1.69
TNFSF4P23510 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.5□□□□□ -1.69
TNFSF4P23510 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TNFSF4P23510 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TNFSF4P23510 AL391684.1-202ENST00000641293 1636 ntBASIC4.5□□□□□ -1.69
TNFSF4P23510 AL034549.2-201ENST00000618285 3373 ntBASIC4.5□□□□□ -1.69
TNFSF4P23510 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.49□□□□□ -1.69
TNFSF4P23510 AC092747.4-201ENST00000620519 1861 ntBASIC4.49□□□□□ -1.69
TNFSF4P23510 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TNFSF4P23510 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
TNFSF4P23510 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
TNFSF4P23510 AC244517.1-201ENST00000606030 2086 ntBASIC4.49□□□□□ -1.69
TNFSF4P23510 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.49□□□□□ -1.69
TNFSF4P23510 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
TNFSF4P23510 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TNFSF4P23510 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TNFSF4P23510 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.49□□□□□ -1.69
TNFSF4P23510 OR9G4-201ENST00000302957 984 ntBASIC4.49□□□□□ -1.69
TNFSF4P23510 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TNFSF4P23510 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TNFSF4P23510 RNU6-359P-201ENST00000365466 108 ntBASIC4.49□□□□□ -1.69
TNFSF4P23510 MIR600-201ENST00000385007 98 ntBASIC4.49□□□□□ -1.69
TNFSF4P23510 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.49□□□□□ -1.69
TNFSF4P23510 RPL35AP24-201ENST00000413846 330 ntBASIC4.49□□□□□ -1.69
TNFSF4P23510 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.49□□□□□ -1.69
TNFSF4P23510 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.49□□□□□ -1.69
TNFSF4P23510 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.49□□□□□ -1.69
TNFSF4P23510 RPL7AP49-201ENST00000429522 581 ntBASIC4.49□□□□□ -1.69
TNFSF4P23510 AL591438.1-201ENST00000433508 581 ntBASIC4.49□□□□□ -1.69
TNFSF4P23510 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TNFSF4P23510 GSTA7P-201ENST00000438425 448 ntBASIC4.49□□□□□ -1.69
TNFSF4P23510 GAPDHP58-201ENST00000438477 1006 ntBASIC4.49□□□□□ -1.69
TNFSF4P23510 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC4.49□□□□□ -1.69
TNFSF4P23510 CDC27P1-201ENST00000445384 715 ntBASIC4.49□□□□□ -1.69
TNFSF4P23510 NDUFS5P3-201ENST00000450668 321 ntBASIC4.49□□□□□ -1.69
TNFSF4P23510 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.49□□□□□ -1.69
TNFSF4P23510 AL353691.1-201ENST00000451332 387 ntBASIC4.49□□□□□ -1.69
TNFSF4P23510 PRPF38AP1-201ENST00000451976 933 ntBASIC4.49□□□□□ -1.69
TNFSF4P23510 AC104634.1-201ENST00000452720 462 ntBASIC4.49□□□□□ -1.69
TNFSF4P23510 COPS8P2-201ENST00000473228 627 ntBASIC4.49□□□□□ -1.69
TNFSF4P23510 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC4.49□□□□□ -1.69
TNFSF4P23510 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TNFSF4P23510 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.49□□□□□ -1.69
TNFSF4P23510 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.49□□□□□ -1.69
TNFSF4P23510 MTCO3P28-201ENST00000513351 515 ntBASIC4.49□□□□□ -1.69
TNFSF4P23510 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.49□□□□□ -1.69
TNFSF4P23510 RNA5SP34-201ENST00000516887 130 ntBASIC4.49□□□□□ -1.69
TNFSF4P23510 RNU6-714P-201ENST00000516963 103 ntBASIC4.49□□□□□ -1.69
TNFSF4P23510 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.49□□□□□ -1.69
TNFSF4P23510 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TNFSF4P23510 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.49□□□□□ -1.69
TNFSF4P23510 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.49□□□□□ -1.69
TNFSF4P23510 AC024940.3-201ENST00000538551 316 ntBASIC4.49□□□□□ -1.69
TNFSF4P23510 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
TNFSF4P23510 AC090022.1-201ENST00000546569 311 ntBASIC4.49□□□□□ -1.69
TNFSF4P23510 NMNAT1P5-201ENST00000559657 841 ntBASIC4.49□□□□□ -1.69
TNFSF4P23510 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.49□□□□□ -1.69
TNFSF4P23510 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.49□□□□□ -1.69
TNFSF4P23510 MIR1269B-201ENST00000580405 75 ntBASIC4.49□□□□□ -1.69
TNFSF4P23510 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC4.49□□□□□ -1.69
TNFSF4P23510 MIR4307-201ENST00000582802 84 ntBASIC4.49□□□□□ -1.69
TNFSF4P23510 MIR3936-201ENST00000584304 110 ntBASIC4.49□□□□□ -1.69
TNFSF4P23510 U73023.1-201ENST00000603134 700 ntBASIC4.49□□□□□ -1.69
TNFSF4P23510 HMGN2P28-201ENST00000606102 262 ntBASIC4.49□□□□□ -1.69
TNFSF4P23510 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.49□□□□□ -1.69
TNFSF4P23510 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.49□□□□□ -1.69
TNFSF4P23510 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TNFSF4P23510 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.49□□□□□ -1.69
TNFSF4P23510 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TNFSF4P23510 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TNFSF4P23510 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
TNFSF4P23510 AC011493.1-201ENST00000596753 1632 ntBASIC4.49□□□□□ -1.69
TNFSF4P23510 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
TNFSF4P23510 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms