Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.32□□□□□ -1.88
UBCP0CG48 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.32□□□□□ -1.88
UBCP0CG48 TBCAP1-201ENST00000436520 327 ntBASIC3.32□□□□□ -1.88
UBCP0CG48 YWHAZP8-201ENST00000436935 731 ntBASIC3.32□□□□□ -1.88
UBCP0CG48 NUTF2P3-201ENST00000448540 384 ntBASIC3.32□□□□□ -1.88
UBCP0CG48 HMGB3P8-201ENST00000449709 577 ntBASIC3.32□□□□□ -1.88
UBCP0CG48 AC006480.1-201ENST00000449887 378 ntBASIC3.32□□□□□ -1.88
UBCP0CG48 MTND3P4-201ENST00000453537 303 ntBASIC3.32□□□□□ -1.88
UBCP0CG48 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.32□□□□□ -1.88
UBCP0CG48 AC007688.1-201ENST00000475592 759 ntBASIC3.32□□□□□ -1.88
UBCP0CG48 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
UBCP0CG48 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.32□□□□□ -1.88
UBCP0CG48 NDUFA5P2-201ENST00000519723 344 ntBASIC3.32□□□□□ -1.88
UBCP0CG48 MRPL49P2-201ENST00000521066 465 ntBASIC3.32□□□□□ -1.88
UBCP0CG48 AL139174.1-201ENST00000531489 886 ntBASIC3.32□□□□□ -1.88
UBCP0CG48 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.32□□□□□ -1.88
UBCP0CG48 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.32□□□□□ -1.88
UBCP0CG48 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.32□□□□□ -1.88
UBCP0CG48 AC025918.2-201ENST00000558683 763 ntBASIC3.32□□□□□ -1.88
UBCP0CG48 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.32□□□□□ -1.88
UBCP0CG48 MTCYBP28-201ENST00000566728 1132 ntBASIC3.32□□□□□ -1.88
UBCP0CG48 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.32□□□□□ -1.88
UBCP0CG48 MIR4284-201ENST00000578924 81 ntBASIC3.32□□□□□ -1.88
UBCP0CG48 MIR3690-201ENST00000580266 75 ntBASIC3.32□□□□□ -1.88
UBCP0CG48 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.32□□□□□ -1.88
UBCP0CG48 AC091488.1-201ENST00000604239 660 ntBASIC3.32□□□□□ -1.88
UBCP0CG48 AL592436.1-201ENST00000605135 558 ntBASIC3.32□□□□□ -1.88
UBCP0CG48 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.32□□□□□ -1.88
UBCP0CG48 MIR8058-201ENST00000615737 89 ntBASIC3.32□□□□□ -1.88
UBCP0CG48 U73479.1-201ENST00000618062 168 ntBASIC3.32□□□□□ -1.88
UBCP0CG48 AC073530.2-201ENST00000623987 261 ntBASIC3.32□□□□□ -1.88
UBCP0CG48 AC017104.5-201ENST00000637647 639 ntBASIC3.32□□□□□ -1.88
UBCP0CG48 OR52H1-202ENST00000641796 1061 ntBASIC3.32□□□□□ -1.88
UBCP0CG48 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
UBCP0CG48 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.32□□□□□ -1.88
UBCP0CG48 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
UBCP0CG48 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.32□□□□□ -1.88
UBCP0CG48 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.32□□□□□ -1.88
UBCP0CG48 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
UBCP0CG48 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
UBCP0CG48 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.31□□□□□ -1.88
UBCP0CG48 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
UBCP0CG48 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
UBCP0CG48 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
UBCP0CG48 AC073429.2-201ENST00000569694 1444 ntBASIC3.31□□□□□ -1.88
UBCP0CG48 ELL2P4-201ENST00000446870 1376 ntBASIC3.31□□□□□ -1.88
UBCP0CG48 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
UBCP0CG48 AC016716.1-201ENST00000265882 708 ntBASIC3.31□□□□□ -1.88
UBCP0CG48 ENSAP3-201ENST00000312710 333 ntBASIC3.31□□□□□ -1.88
UBCP0CG48 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
UBCP0CG48 DSTNP4-201ENST00000399472 474 ntBASIC3.31□□□□□ -1.88
UBCP0CG48 MTCO3P31-201ENST00000405526 789 ntBASIC3.31□□□□□ -1.88
UBCP0CG48 ZNF602P-201ENST00000405929 924 ntBASIC3.31□□□□□ -1.88
UBCP0CG48 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.31□□□□□ -1.88
UBCP0CG48 OR8G2P-201ENST00000412796 908 ntBASIC3.31□□□□□ -1.88
UBCP0CG48 HMGB3P31-201ENST00000413333 595 ntBASIC3.31□□□□□ -1.88
UBCP0CG48 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
UBCP0CG48 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.31□□□□□ -1.88
UBCP0CG48 CR848007.2-201ENST00000424918 787 ntBASIC3.31□□□□□ -1.88
UBCP0CG48 RPL18P10-201ENST00000425606 538 ntBASIC3.31□□□□□ -1.88
UBCP0CG48 MOB1AP1-201ENST00000430903 535 ntBASIC3.31□□□□□ -1.88
UBCP0CG48 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.31□□□□□ -1.88
UBCP0CG48 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.31□□□□□ -1.88
UBCP0CG48 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.31□□□□□ -1.88
UBCP0CG48 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.31□□□□□ -1.88
UBCP0CG48 AC004865.1-201ENST00000442276 1003 ntBASIC3.31□□□□□ -1.88
UBCP0CG48 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.31□□□□□ -1.88
UBCP0CG48 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.31□□□□□ -1.88
UBCP0CG48 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.31□□□□□ -1.88
UBCP0CG48 AC006539.3-201ENST00000454258 129 ntBASIC3.31□□□□□ -1.88
UBCP0CG48 RN7SL330P-201ENST00000469709 307 ntBASIC3.31□□□□□ -1.88
UBCP0CG48 HMGB1P38-201ENST00000490557 577 ntBASIC3.31□□□□□ -1.88
UBCP0CG48 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.31□□□□□ -1.88
UBCP0CG48 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.31□□□□□ -1.88
UBCP0CG48 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.31□□□□□ -1.88
UBCP0CG48 AC008489.1-201ENST00000524271 483 ntBASIC3.31□□□□□ -1.88
UBCP0CG48 MTCYBP41-201ENST00000528913 1123 ntBASIC3.31□□□□□ -1.88
UBCP0CG48 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.31□□□□□ -1.88
UBCP0CG48 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.31□□□□□ -1.88
UBCP0CG48 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.31□□□□□ -1.88
UBCP0CG48 AC093014.1-201ENST00000548926 724 ntBASIC3.31□□□□□ -1.88
UBCP0CG48 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC3.31□□□□□ -1.88
UBCP0CG48 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.31□□□□□ -1.88
UBCP0CG48 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.31□□□□□ -1.88
UBCP0CG48 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.31□□□□□ -1.88
UBCP0CG48 AC233266.2-201ENST00000567067 528 ntBASIC3.31□□□□□ -1.88
UBCP0CG48 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.31□□□□□ -1.88
UBCP0CG48 MIR3186-201ENST00000577404 85 ntBASIC3.31□□□□□ -1.88
UBCP0CG48 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.31□□□□□ -1.88
UBCP0CG48 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
UBCP0CG48 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.31□□□□□ -1.88
UBCP0CG48 AC011492.1-201ENST00000600023 315 ntBASIC3.31□□□□□ -1.88
UBCP0CG48 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.31□□□□□ -1.88
UBCP0CG48 AC135178.6-201ENST00000605314 398 ntBASIC3.31□□□□□ -1.88
UBCP0CG48 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC3.31□□□□□ -1.88
UBCP0CG48 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.31□□□□□ -1.88
UBCP0CG48 AC116096.1-201ENST00000566804 2314 ntBASIC3.31□□□□□ -1.88
UBCP0CG48 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
UBCP0CG48 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.3□□□□□ -1.88
UBCP0CG48 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms