Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 NCAPGP2-201ENST00000557911 754 ntBASIC3.33□□□□□ -1.88
HLA-DQB2P05538 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.33□□□□□ -1.88
HLA-DQB2P05538 AC008507.1-201ENST00000587506 734 ntBASIC3.33□□□□□ -1.88
HLA-DQB2P05538 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.33□□□□□ -1.88
HLA-DQB2P05538 AL354976.1-201ENST00000613843 387 ntBASIC3.33□□□□□ -1.88
HLA-DQB2P05538 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC3.33□□□□□ -1.88
HLA-DQB2P05538 AC012314.7-201ENST00000619693 93 ntBASIC3.33□□□□□ -1.88
HLA-DQB2P05538 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
HLA-DQB2P05538 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.33□□□□□ -1.88
HLA-DQB2P05538 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HLA-DQB2P05538 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.33□□□□□ -1.88
HLA-DQB2P05538 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.33□□□□□ -1.88
HLA-DQB2P05538 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HLA-DQB2P05538 USP8P1-201ENST00000494673 3183 ntBASIC3.33□□□□□ -1.88
HLA-DQB2P05538 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HLA-DQB2P05538 XIAPP3-201ENST00000312918 795 ntBASIC3.32□□□□□ -1.88
HLA-DQB2P05538 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HLA-DQB2P05538 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HLA-DQB2P05538 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HLA-DQB2P05538 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.32□□□□□ -1.88
HLA-DQB2P05538 RNA5SP171-201ENST00000391071 115 ntBASIC3.32□□□□□ -1.88
HLA-DQB2P05538 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HLA-DQB2P05538 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.32□□□□□ -1.88
HLA-DQB2P05538 AL389915.1-201ENST00000422463 466 ntBASIC3.32□□□□□ -1.88
HLA-DQB2P05538 RPF2P1-201ENST00000424137 906 ntBASIC3.32□□□□□ -1.88
HLA-DQB2P05538 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.32□□□□□ -1.88
HLA-DQB2P05538 FAR1P1-201ENST00000427163 934 ntBASIC3.32□□□□□ -1.88
HLA-DQB2P05538 BMS1P19-201ENST00000433925 393 ntBASIC3.32□□□□□ -1.88
HLA-DQB2P05538 CST9LP2-201ENST00000437612 320 ntBASIC3.32□□□□□ -1.88
HLA-DQB2P05538 RPL7P31-201ENST00000450192 724 ntBASIC3.32□□□□□ -1.88
HLA-DQB2P05538 HMGB3P21-201ENST00000452483 547 ntBASIC3.32□□□□□ -1.88
HLA-DQB2P05538 CYCSP20-201ENST00000473154 315 ntBASIC3.32□□□□□ -1.88
HLA-DQB2P05538 AC005912.1-201ENST00000495392 255 ntBASIC3.32□□□□□ -1.88
HLA-DQB2P05538 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.32□□□□□ -1.88
HLA-DQB2P05538 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.32□□□□□ -1.88
HLA-DQB2P05538 SCARNA20.6-201ENST00000517251 106 ntBASIC3.32□□□□□ -1.88
HLA-DQB2P05538 UBE2NP1-201ENST00000545592 458 ntBASIC3.32□□□□□ -1.88
HLA-DQB2P05538 MIR4716-201ENST00000579628 84 ntBASIC3.32□□□□□ -1.88
HLA-DQB2P05538 ZNF415P1-201ENST00000582279 1166 ntBASIC3.32□□□□□ -1.88
HLA-DQB2P05538 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.32□□□□□ -1.88
HLA-DQB2P05538 AC019176.2-201ENST00000611579 315 ntBASIC3.32□□□□□ -1.88
HLA-DQB2P05538 AC008121.2-201ENST00000614647 523 ntBASIC3.32□□□□□ -1.88
HLA-DQB2P05538 AC009464.1-201ENST00000615731 469 ntBASIC3.32□□□□□ -1.88
HLA-DQB2P05538 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC3.32□□□□□ -1.88
HLA-DQB2P05538 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HLA-DQB2P05538 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
HLA-DQB2P05538 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
HLA-DQB2P05538 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DQB2P05538 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DQB2P05538 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DQB2P05538 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.31□□□□□ -1.88
HLA-DQB2P05538 MTCO1P14-201ENST00000441695 1559 ntBASIC3.31□□□□□ -1.88
HLA-DQB2P05538 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DQB2P05538 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.31□□□□□ -1.88
HLA-DQB2P05538 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DQB2P05538 RNU1-75P-201ENST00000347264 129 ntBASIC3.31□□□□□ -1.88
HLA-DQB2P05538 AC005300.1-201ENST00000428401 373 ntBASIC3.31□□□□□ -1.88
HLA-DQB2P05538 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.31□□□□□ -1.88
HLA-DQB2P05538 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.31□□□□□ -1.88
HLA-DQB2P05538 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC3.31□□□□□ -1.88
HLA-DQB2P05538 AC006539.3-201ENST00000454258 129 ntBASIC3.31□□□□□ -1.88
HLA-DQB2P05538 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DQB2P05538 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DQB2P05538 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DQB2P05538 USP9YP5-201ENST00000511770 630 ntBASIC3.31□□□□□ -1.88
HLA-DQB2P05538 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.31□□□□□ -1.88
HLA-DQB2P05538 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.31□□□□□ -1.88
HLA-DQB2P05538 RNU4-18P-201ENST00000516751 149 ntBASIC3.31□□□□□ -1.88
HLA-DQB2P05538 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.31□□□□□ -1.88
HLA-DQB2P05538 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.31□□□□□ -1.88
HLA-DQB2P05538 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.31□□□□□ -1.88
HLA-DQB2P05538 BMS1P7-201ENST00000602440 1052 ntBASIC3.31□□□□□ -1.88
HLA-DQB2P05538 PSMA6P4-201ENST00000603247 718 ntBASIC3.31□□□□□ -1.88
HLA-DQB2P05538 ELOCP35-201ENST00000604289 336 ntBASIC3.31□□□□□ -1.88
HLA-DQB2P05538 AC073657.2-201ENST00000605661 303 ntBASIC3.31□□□□□ -1.88
HLA-DQB2P05538 MIR6075-201ENST00000620782 95 ntBASIC3.31□□□□□ -1.88
HLA-DQB2P05538 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DQB2P05538 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DQB2P05538 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DQB2P05538 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DQB2P05538 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.31□□□□□ -1.88
HLA-DQB2P05538 SPATA2P1-201ENST00000431223 2055 ntBASIC3.31□□□□□ -1.88
HLA-DQB2P05538 EXOC5P1-201ENST00000510543 1969 ntBASIC3.31□□□□□ -1.88
HLA-DQB2P05538 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
HLA-DQB2P05538 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HLA-DQB2P05538 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
HLA-DQB2P05538 RNU1-85P-201ENST00000364127 164 ntBASIC3.3□□□□□ -1.88
HLA-DQB2P05538 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.3□□□□□ -1.88
HLA-DQB2P05538 MIR7-3-201ENST00000384898 110 ntBASIC3.3□□□□□ -1.88
HLA-DQB2P05538 RN7SKP222-201ENST00000410651 315 ntBASIC3.3□□□□□ -1.88
HLA-DQB2P05538 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.3□□□□□ -1.88
HLA-DQB2P05538 RPS12P23-201ENST00000419579 400 ntBASIC3.3□□□□□ -1.88
HLA-DQB2P05538 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.3□□□□□ -1.88
HLA-DQB2P05538 ISCA1P2-201ENST00000438679 421 ntBASIC3.3□□□□□ -1.88
HLA-DQB2P05538 AL358232.1-201ENST00000448030 501 ntBASIC3.3□□□□□ -1.88
HLA-DQB2P05538 Z99127.3-201ENST00000448158 395 ntBASIC3.3□□□□□ -1.88
HLA-DQB2P05538 AC091153.1-201ENST00000466297 402 ntBASIC3.3□□□□□ -1.88
HLA-DQB2P05538 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.3□□□□□ -1.88
HLA-DQB2P05538 RPS4XP22-201ENST00000480755 780 ntBASIC3.3□□□□□ -1.88
HLA-DQB2P05538 AC108078.3-201ENST00000502633 489 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 140.6 ms