Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AC012671.1-201ENST00000451912 203 ntBASIC3.99□□□□□ -1.77
CLPTM1O96005 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC3.99□□□□□ -1.77
CLPTM1O96005 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC3.99□□□□□ -1.77
CLPTM1O96005 RN7SL738P-201ENST00000470264 297 ntBASIC3.99□□□□□ -1.77
CLPTM1O96005 NDUFA5P9-201ENST00000472609 340 ntBASIC3.99□□□□□ -1.77
CLPTM1O96005 AC104763.1-201ENST00000475274 360 ntBASIC3.99□□□□□ -1.77
CLPTM1O96005 AC004263.1-201ENST00000479327 332 ntBASIC3.99□□□□□ -1.77
CLPTM1O96005 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.99□□□□□ -1.77
CLPTM1O96005 AC084024.2-201ENST00000503480 791 ntBASIC3.99□□□□□ -1.77
CLPTM1O96005 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC3.99□□□□□ -1.77
CLPTM1O96005 AC005351.1-201ENST00000511152 786 ntBASIC3.99□□□□□ -1.77
CLPTM1O96005 NDUFB4P9-201ENST00000511646 388 ntBASIC3.99□□□□□ -1.77
CLPTM1O96005 RNU6-416P-201ENST00000516265 103 ntBASIC3.99□□□□□ -1.77
CLPTM1O96005 RNA5SP73-201ENST00000516744 108 ntBASIC3.99□□□□□ -1.77
CLPTM1O96005 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.99□□□□□ -1.77
CLPTM1O96005 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.99□□□□□ -1.77
CLPTM1O96005 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.99□□□□□ -1.77
CLPTM1O96005 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.99□□□□□ -1.77
CLPTM1O96005 AC124293.1-201ENST00000530034 493 ntBASIC3.99□□□□□ -1.77
CLPTM1O96005 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.99□□□□□ -1.77
CLPTM1O96005 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.99□□□□□ -1.77
CLPTM1O96005 AC044913.1-201ENST00000557200 430 ntBASIC3.99□□□□□ -1.77
CLPTM1O96005 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.99□□□□□ -1.77
CLPTM1O96005 AC009101.1-201ENST00000568135 242 ntBASIC3.99□□□□□ -1.77
CLPTM1O96005 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.99□□□□□ -1.77
CLPTM1O96005 MIR4330-201ENST00000579077 105 ntBASIC3.99□□□□□ -1.77
CLPTM1O96005 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC3.99□□□□□ -1.77
CLPTM1O96005 AP001269.3-201ENST00000588718 329 ntBASIC3.99□□□□□ -1.77
CLPTM1O96005 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.99□□□□□ -1.77
CLPTM1O96005 AL353778.1-201ENST00000603149 408 ntBASIC3.99□□□□□ -1.77
CLPTM1O96005 AC104785.1-201ENST00000603220 588 ntBASIC3.99□□□□□ -1.77
CLPTM1O96005 AC097065.2-201ENST00000608159 533 ntBASIC3.99□□□□□ -1.77
CLPTM1O96005 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.99□□□□□ -1.77
CLPTM1O96005 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.99□□□□□ -1.77
CLPTM1O96005 AC092954.1-201ENST00000609121 445 ntBASIC3.99□□□□□ -1.77
CLPTM1O96005 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.99□□□□□ -1.77
CLPTM1O96005 AL136295.6-201ENST00000610486 658 ntBASIC3.99□□□□□ -1.77
CLPTM1O96005 AC064801.1-201ENST00000612025 407 ntBASIC3.99□□□□□ -1.77
CLPTM1O96005 AC023043.4-201ENST00000612081 449 ntBASIC3.99□□□□□ -1.77
CLPTM1O96005 AC091304.6-201ENST00000619761 202 ntBASIC3.99□□□□□ -1.77
CLPTM1O96005 AP002782.1-201ENST00000623107 614 ntBASIC3.99□□□□□ -1.77
CLPTM1O96005 AC109454.4-201ENST00000623411 649 ntBASIC3.99□□□□□ -1.77
CLPTM1O96005 U3.53-201ENST00000628922 216 ntBASIC3.99□□□□□ -1.77
CLPTM1O96005 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC3.99□□□□□ -1.77
CLPTM1O96005 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CLPTM1O96005 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC3.99□□□□□ -1.77
CLPTM1O96005 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CLPTM1O96005 MTCO1P6-201ENST00000481192 1384 ntBASIC3.99□□□□□ -1.77
CLPTM1O96005 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CLPTM1O96005 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.98□□□□□ -1.77
CLPTM1O96005 DCAF13P3-201ENST00000561147 1334 ntBASIC3.98□□□□□ -1.77
CLPTM1O96005 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CLPTM1O96005 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CLPTM1O96005 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CLPTM1O96005 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CLPTM1O96005 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CLPTM1O96005 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CLPTM1O96005 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CLPTM1O96005 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CLPTM1O96005 RNA5SP332-201ENST00000391063 115 ntBASIC3.98□□□□□ -1.77
CLPTM1O96005 AC119751.6-201ENST00000416712 186 ntBASIC3.98□□□□□ -1.77
CLPTM1O96005 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.98□□□□□ -1.77
CLPTM1O96005 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.98□□□□□ -1.77
CLPTM1O96005 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.98□□□□□ -1.77
CLPTM1O96005 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.98□□□□□ -1.77
CLPTM1O96005 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.98□□□□□ -1.77
CLPTM1O96005 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.98□□□□□ -1.77
CLPTM1O96005 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.98□□□□□ -1.77
CLPTM1O96005 USP9YP7-201ENST00000436723 430 ntBASIC3.98□□□□□ -1.77
CLPTM1O96005 FGF7P5-201ENST00000441829 291 ntBASIC3.98□□□□□ -1.77
CLPTM1O96005 CEACAMP9-201ENST00000442990 513 ntBASIC3.98□□□□□ -1.77
CLPTM1O96005 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.98□□□□□ -1.77
CLPTM1O96005 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.98□□□□□ -1.77
CLPTM1O96005 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC3.98□□□□□ -1.77
CLPTM1O96005 USP9YP32-201ENST00000452432 430 ntBASIC3.98□□□□□ -1.77
CLPTM1O96005 ANP32BP2-201ENST00000454525 545 ntBASIC3.98□□□□□ -1.77
CLPTM1O96005 NDUFA12P1-201ENST00000455914 406 ntBASIC3.98□□□□□ -1.77
CLPTM1O96005 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC3.98□□□□□ -1.77
CLPTM1O96005 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.98□□□□□ -1.77
CLPTM1O96005 RPL36AP41-201ENST00000493820 306 ntBASIC3.98□□□□□ -1.77
CLPTM1O96005 AL035404.1-201ENST00000497982 568 ntBASIC3.98□□□□□ -1.77
CLPTM1O96005 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3.98□□□□□ -1.77
CLPTM1O96005 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.98□□□□□ -1.77
CLPTM1O96005 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC3.98□□□□□ -1.77
CLPTM1O96005 BTF3L4P4-201ENST00000506381 449 ntBASIC3.98□□□□□ -1.77
CLPTM1O96005 AC023632.1-201ENST00000518463 375 ntBASIC3.98□□□□□ -1.77
CLPTM1O96005 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.98□□□□□ -1.77
CLPTM1O96005 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.98□□□□□ -1.77
CLPTM1O96005 AC091515.1-201ENST00000548110 679 ntBASIC3.98□□□□□ -1.77
CLPTM1O96005 CR383656.6-201ENST00000550518 394 ntBASIC3.98□□□□□ -1.77
CLPTM1O96005 ZNF321P-202ENST00000550843 495 ntBASIC3.98□□□□□ -1.77
CLPTM1O96005 AGGF1P8-201ENST00000562979 1000 ntBASIC3.98□□□□□ -1.77
CLPTM1O96005 AC009094.1-201ENST00000564443 426 ntBASIC3.98□□□□□ -1.77
CLPTM1O96005 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.98□□□□□ -1.77
CLPTM1O96005 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.98□□□□□ -1.77
CLPTM1O96005 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.98□□□□□ -1.77
CLPTM1O96005 RN7SL690P-201ENST00000582087 240 ntBASIC3.98□□□□□ -1.77
CLPTM1O96005 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.98□□□□□ -1.77
CLPTM1O96005 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.98□□□□□ -1.77
CLPTM1O96005 DUXAP3-201ENST00000603616 594 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms