Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.96□□□□□ -1.78
PRKNO60260 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.96□□□□□ -1.78
PRKNO60260 MRPL49P2-201ENST00000521066 465 ntBASIC3.96□□□□□ -1.78
PRKNO60260 AP003730.1-201ENST00000524605 285 ntBASIC3.96□□□□□ -1.78
PRKNO60260 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.96□□□□□ -1.78
PRKNO60260 ELOCP32-201ENST00000548625 324 ntBASIC3.96□□□□□ -1.78
PRKNO60260 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.96□□□□□ -1.78
PRKNO60260 AL109766.1-201ENST00000555080 552 ntBASIC3.96□□□□□ -1.78
PRKNO60260 AC025884.1-201ENST00000556034 378 ntBASIC3.96□□□□□ -1.78
PRKNO60260 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.96□□□□□ -1.78
PRKNO60260 AC109446.2-201ENST00000567872 497 ntBASIC3.96□□□□□ -1.78
PRKNO60260 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.96□□□□□ -1.78
PRKNO60260 AC010620.1-201ENST00000601088 1102 ntBASIC3.96□□□□□ -1.78
PRKNO60260 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PRKNO60260 AC080013.6-201ENST00000606185 215 ntBASIC3.96□□□□□ -1.78
PRKNO60260 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.96□□□□□ -1.78
PRKNO60260 SNORD91B-202ENST00000608459 222 ntBASIC3.96□□□□□ -1.78
PRKNO60260 AP004247.3-201ENST00000608682 624 ntBASIC3.96□□□□□ -1.78
PRKNO60260 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PRKNO60260 AL731566.2-201ENST00000618971 317 ntBASIC3.96□□□□□ -1.78
PRKNO60260 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC3.96□□□□□ -1.78
PRKNO60260 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.96□□□□□ -1.78
PRKNO60260 AC103706.2-201ENST00000638080 240 ntBASIC3.96□□□□□ -1.78
PRKNO60260 OR8B1P-202ENST00000641132 1178 ntBASIC3.96□□□□□ -1.78
PRKNO60260 LARP1BP1-201ENST00000506036 1359 ntBASIC3.96□□□□□ -1.78
PRKNO60260 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC3.96□□□□□ -1.78
PRKNO60260 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PRKNO60260 ASNSP1-204ENST00000641977 1664 ntBASIC3.96□□□□□ -1.78
PRKNO60260 Z95327.2-201ENST00000414579 1873 ntBASIC3.96□□□□□ -1.78
PRKNO60260 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC3.96□□□□□ -1.78
PRKNO60260 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
PRKNO60260 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PRKNO60260 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.96□□□□□ -1.78
PRKNO60260 AL513185.3-201ENST00000433335 1300 ntBASIC3.95□□□□□ -1.78
PRKNO60260 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC3.95□□□□□ -1.78
PRKNO60260 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC3.95□□□□□ -1.78
PRKNO60260 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PRKNO60260 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.95□□□□□ -1.78
PRKNO60260 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.95□□□□□ -1.78
PRKNO60260 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.95□□□□□ -1.78
PRKNO60260 AP000776.1-201ENST00000530032 1663 ntBASIC3.95□□□□□ -1.78
PRKNO60260 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
PRKNO60260 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.95□□□□□ -1.78
PRKNO60260 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PRKNO60260 RNA5SP22-201ENST00000365393 109 ntBASIC3.95□□□□□ -1.78
PRKNO60260 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.95□□□□□ -1.78
PRKNO60260 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PRKNO60260 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PRKNO60260 SNORA51.12-201ENST00000384448 134 ntBASIC3.95□□□□□ -1.78
PRKNO60260 MIR92A2-201ENST00000385299 75 ntBASIC3.95□□□□□ -1.78
PRKNO60260 SKINT1L-201ENST00000401057 817 ntBASIC3.95□□□□□ -1.78
PRKNO60260 RNU6-272P-201ENST00000411028 104 ntBASIC3.95□□□□□ -1.78
PRKNO60260 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.95□□□□□ -1.78
PRKNO60260 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.95□□□□□ -1.78
PRKNO60260 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.95□□□□□ -1.78
PRKNO60260 UBE2V1P1-201ENST00000430836 445 ntBASIC3.95□□□□□ -1.78
PRKNO60260 CEACAMP1-201ENST00000434624 1035 ntBASIC3.95□□□□□ -1.78
PRKNO60260 AC092473.1-201ENST00000441098 221 ntBASIC3.95□□□□□ -1.78
PRKNO60260 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC3.95□□□□□ -1.78
PRKNO60260 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PRKNO60260 RPL37P3-201ENST00000456825 293 ntBASIC3.95□□□□□ -1.78
PRKNO60260 RNU7-125P-201ENST00000458760 62 ntBASIC3.95□□□□□ -1.78
PRKNO60260 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
PRKNO60260 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.95□□□□□ -1.78
PRKNO60260 RPL23AP65-201ENST00000475608 468 ntBASIC3.95□□□□□ -1.78
PRKNO60260 RN7SL817P-201ENST00000480777 288 ntBASIC3.95□□□□□ -1.78
PRKNO60260 AC012158.1-204ENST00000483430 465 ntBASIC3.95□□□□□ -1.78
PRKNO60260 AC082651.2-201ENST00000496833 166 ntBASIC3.95□□□□□ -1.78
PRKNO60260 AC011352.3-201ENST00000505162 593 ntBASIC3.95□□□□□ -1.78
PRKNO60260 PGBD4P4-201ENST00000509673 613 ntBASIC3.95□□□□□ -1.78
PRKNO60260 AC048346.1-201ENST00000510247 144 ntBASIC3.95□□□□□ -1.78
PRKNO60260 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.95□□□□□ -1.78
PRKNO60260 TCP11X3P-202ENST00000514289 1254 ntBASIC3.95□□□□□ -1.78
PRKNO60260 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PRKNO60260 AC087808.1-201ENST00000520501 361 ntBASIC3.95□□□□□ -1.78
PRKNO60260 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.95□□□□□ -1.78
PRKNO60260 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.95□□□□□ -1.78
PRKNO60260 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.95□□□□□ -1.78
PRKNO60260 DERA-209ENST00000532964 854 ntTSL 5 BASIC3.95□□□□□ -1.78
PRKNO60260 AL356057.1-201ENST00000533798 831 ntBASIC3.95□□□□□ -1.78
PRKNO60260 AC004217.3-201ENST00000551552 878 ntBASIC3.95□□□□□ -1.78
PRKNO60260 RPL21P7-201ENST00000557463 483 ntBASIC3.95□□□□□ -1.78
PRKNO60260 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.95□□□□□ -1.78
PRKNO60260 AC018552.3-201ENST00000567416 561 ntBASIC3.95□□□□□ -1.78
PRKNO60260 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
PRKNO60260 AC069304.3-201ENST00000603938 1084 ntBASIC3.95□□□□□ -1.78
PRKNO60260 AC090948.2-201ENST00000607363 564 ntBASIC3.95□□□□□ -1.78
PRKNO60260 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PRKNO60260 AC243654.2-201ENST00000612843 443 ntBASIC3.95□□□□□ -1.78
PRKNO60260 AC023158.2-201ENST00000614876 543 ntBASIC3.95□□□□□ -1.78
PRKNO60260 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.95□□□□□ -1.78
PRKNO60260 AC009318.3-201ENST00000616916 503 ntBASIC3.95□□□□□ -1.78
PRKNO60260 AL603755.1-201ENST00000619504 163 ntBASIC3.95□□□□□ -1.78
PRKNO60260 MIR4278-201ENST00000636094 69 ntBASIC3.95□□□□□ -1.78
PRKNO60260 AC068620.4-201ENST00000636730 1182 ntBASIC3.95□□□□□ -1.78
PRKNO60260 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.95□□□□□ -1.78
PRKNO60260 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.95□□□□□ -1.78
PRKNO60260 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
PRKNO60260 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
PRKNO60260 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms