Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 RN7SKP263-201ENST00000411194 309 ntBASIC3.27□□□□□ -1.89
SGCEO43556 NUP35P2-201ENST00000416748 943 ntBASIC3.27□□□□□ -1.89
SGCEO43556 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.27□□□□□ -1.89
SGCEO43556 AC002075.2-201ENST00000425207 252 ntBASIC3.27□□□□□ -1.89
SGCEO43556 AL591419.1-201ENST00000427423 339 ntBASIC3.27□□□□□ -1.89
SGCEO43556 RPL7P2-201ENST00000427639 268 ntBASIC3.27□□□□□ -1.89
SGCEO43556 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.27□□□□□ -1.89
SGCEO43556 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.27□□□□□ -1.89
SGCEO43556 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SGCEO43556 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC3.27□□□□□ -1.89
SGCEO43556 ARL2BPP6-201ENST00000512757 439 ntBASIC3.27□□□□□ -1.89
SGCEO43556 AC010265.1-201ENST00000513509 211 ntBASIC3.27□□□□□ -1.89
SGCEO43556 AC092593.2-201ENST00000513866 913 ntBASIC3.27□□□□□ -1.89
SGCEO43556 RN7SKP83-201ENST00000516512 178 ntBASIC3.27□□□□□ -1.89
SGCEO43556 SCARNA14-201ENST00000516903 136 ntBASIC3.27□□□□□ -1.89
SGCEO43556 COX6B1P6-201ENST00000522347 255 ntBASIC3.27□□□□□ -1.89
SGCEO43556 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.27□□□□□ -1.89
SGCEO43556 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.27□□□□□ -1.89
SGCEO43556 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC3.27□□□□□ -1.89
SGCEO43556 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.27□□□□□ -1.89
SGCEO43556 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.27□□□□□ -1.89
SGCEO43556 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.27□□□□□ -1.89
SGCEO43556 AC067959.1-201ENST00000604334 379 ntBASIC3.27□□□□□ -1.89
SGCEO43556 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
SGCEO43556 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.27□□□□□ -1.89
SGCEO43556 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SGCEO43556 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SGCEO43556 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SGCEO43556 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.27□□□□□ -1.89
SGCEO43556 AC068724.3-201ENST00000625906 87 ntBASIC3.27□□□□□ -1.89
SGCEO43556 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.27□□□□□ -1.89
SGCEO43556 AC090337.1-201ENST00000579651 2074 ntBASIC3.27□□□□□ -1.89
SGCEO43556 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.27□□□□□ -1.89
SGCEO43556 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SGCEO43556 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SGCEO43556 SRP72P2-201ENST00000344851 1979 ntBASIC3.27□□□□□ -1.89
SGCEO43556 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SGCEO43556 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.27□□□□□ -1.89
SGCEO43556 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
SGCEO43556 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
SGCEO43556 MTCO1P24-201ENST00000515438 1558 ntBASIC3.26□□□□□ -1.89
SGCEO43556 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SGCEO43556 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SGCEO43556 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SGCEO43556 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
SGCEO43556 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SGCEO43556 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SGCEO43556 EI24P1-201ENST00000416584 867 ntBASIC3.26□□□□□ -1.89
SGCEO43556 RPS15AP40-201ENST00000419621 391 ntBASIC3.26□□□□□ -1.89
SGCEO43556 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.26□□□□□ -1.89
SGCEO43556 PSMA2P3-201ENST00000429685 675 ntBASIC3.26□□□□□ -1.89
SGCEO43556 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.26□□□□□ -1.89
SGCEO43556 CKS1BP5-201ENST00000434172 273 ntBASIC3.26□□□□□ -1.89
SGCEO43556 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.26□□□□□ -1.89
SGCEO43556 SETP5-201ENST00000437270 562 ntBASIC3.26□□□□□ -1.89
SGCEO43556 AC006994.1-201ENST00000438212 839 ntBASIC3.26□□□□□ -1.89
SGCEO43556 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.26□□□□□ -1.89
SGCEO43556 RPS29P7-201ENST00000439662 171 ntBASIC3.26□□□□□ -1.89
SGCEO43556 RAD1P2-201ENST00000446414 663 ntBASIC3.26□□□□□ -1.89
SGCEO43556 NANOGP10-201ENST00000453325 895 ntBASIC3.26□□□□□ -1.89
SGCEO43556 AC099563.1-201ENST00000456086 418 ntBASIC3.26□□□□□ -1.89
SGCEO43556 AC103987.1-201ENST00000473394 348 ntBASIC3.26□□□□□ -1.89
SGCEO43556 GAPDHP36-201ENST00000480688 918 ntBASIC3.26□□□□□ -1.89
SGCEO43556 RPL31P13-201ENST00000484151 370 ntBASIC3.26□□□□□ -1.89
SGCEO43556 AC092185.1-201ENST00000491371 97 ntBASIC3.26□□□□□ -1.89
SGCEO43556 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.26□□□□□ -1.89
SGCEO43556 PRELID3BP5-201ENST00000508612 460 ntBASIC3.26□□□□□ -1.89
SGCEO43556 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.26□□□□□ -1.89
SGCEO43556 AC093770.1-201ENST00000511559 571 ntBASIC3.26□□□□□ -1.89
SGCEO43556 RN7SKP141-201ENST00000516167 338 ntBASIC3.26□□□□□ -1.89
SGCEO43556 RN7SKP277-201ENST00000516895 283 ntBASIC3.26□□□□□ -1.89
SGCEO43556 RN7SKP60-201ENST00000516985 239 ntBASIC3.26□□□□□ -1.89
SGCEO43556 AC104997.1-201ENST00000519761 717 ntBASIC3.26□□□□□ -1.89
SGCEO43556 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.26□□□□□ -1.89
SGCEO43556 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.26□□□□□ -1.89
SGCEO43556 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.26□□□□□ -1.89
SGCEO43556 AC087499.8-201ENST00000578406 226 ntBASIC3.26□□□□□ -1.89
SGCEO43556 RN7SL703P-201ENST00000578485 302 ntBASIC3.26□□□□□ -1.89
SGCEO43556 MIR4425-201ENST00000580572 84 ntBASIC3.26□□□□□ -1.89
SGCEO43556 AC022916.3-201ENST00000592961 742 ntBASIC3.26□□□□□ -1.89
SGCEO43556 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.26□□□□□ -1.89
SGCEO43556 AC009948.4-201ENST00000604692 675 ntBASIC3.26□□□□□ -1.89
SGCEO43556 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.26□□□□□ -1.89
SGCEO43556 AC016717.3-201ENST00000624730 554 ntBASIC3.26□□□□□ -1.89
SGCEO43556 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
SGCEO43556 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
SGCEO43556 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
SGCEO43556 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
SGCEO43556 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SGCEO43556 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SGCEO43556 CEP170P1-201ENST00000502249 4587 ntBASIC3.25□□□□□ -1.89
SGCEO43556 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SGCEO43556 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SGCEO43556 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.25□□□□□ -1.89
SGCEO43556 OR4A15-201ENST00000314706 1035 ntBASIC3.25□□□□□ -1.89
SGCEO43556 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SGCEO43556 RPL32P23-201ENST00000397237 405 ntBASIC3.25□□□□□ -1.89
SGCEO43556 HMGB3P20-201ENST00000417997 600 ntBASIC3.25□□□□□ -1.89
SGCEO43556 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.25□□□□□ -1.89
SGCEO43556 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms