Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 FTH1P24-201ENST00000503502 462 ntBASIC2.66□□□□□ -1.98
HLA-DRB4X5D2U9 KCTD9P5-201ENST00000504141 1170 ntBASIC2.66□□□□□ -1.98
HLA-DRB4X5D2U9 PDLIM1P4-201ENST00000504327 1006 ntBASIC2.66□□□□□ -1.98
HLA-DRB4X5D2U9 AC114967.1-201ENST00000504890 259 ntBASIC2.66□□□□□ -1.98
HLA-DRB4X5D2U9 AC005921.1-201ENST00000510589 286 ntBASIC2.66□□□□□ -1.98
HLA-DRB4X5D2U9 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC2.66□□□□□ -1.98
HLA-DRB4X5D2U9 RN7SKP18-201ENST00000516005 275 ntBASIC2.66□□□□□ -1.98
HLA-DRB4X5D2U9 TBCA-206ENST00000518338 551 ntTSL 2 BASIC2.66□□□□□ -1.98
HLA-DRB4X5D2U9 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC2.66□□□□□ -1.98
HLA-DRB4X5D2U9 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC2.66□□□□□ -1.98
HLA-DRB4X5D2U9 STX3-204ENST00000530221 534 ntTSL 5 BASIC2.66□□□□□ -1.98
HLA-DRB4X5D2U9 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
HLA-DRB4X5D2U9 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC2.66□□□□□ -1.98
HLA-DRB4X5D2U9 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC2.66□□□□□ -1.98
HLA-DRB4X5D2U9 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC2.66□□□□□ -1.98
HLA-DRB4X5D2U9 AC106785.1-201ENST00000565935 262 ntBASIC2.66□□□□□ -1.98
HLA-DRB4X5D2U9 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC2.66□□□□□ -1.98
HLA-DRB4X5D2U9 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC2.66□□□□□ -1.98
HLA-DRB4X5D2U9 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.66□□□□□ -1.98
HLA-DRB4X5D2U9 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC2.66□□□□□ -1.98
HLA-DRB4X5D2U9 AC008507.1-201ENST00000587506 734 ntBASIC2.66□□□□□ -1.98
HLA-DRB4X5D2U9 LLPHP1-201ENST00000603571 367 ntBASIC2.66□□□□□ -1.98
HLA-DRB4X5D2U9 AC112230.1-201ENST00000604342 547 ntBASIC2.66□□□□□ -1.98
HLA-DRB4X5D2U9 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC2.66□□□□□ -1.98
HLA-DRB4X5D2U9 SNORA50A-202ENST00000629536 136 ntBASIC2.66□□□□□ -1.98
HLA-DRB4X5D2U9 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC2.66□□□□□ -1.98
HLA-DRB4X5D2U9 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
HLA-DRB4X5D2U9 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
HLA-DRB4X5D2U9 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
HLA-DRB4X5D2U9 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
HLA-DRB4X5D2U9 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC2.66□□□□□ -1.98
HLA-DRB4X5D2U9 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC2.66□□□□□ -1.98
HLA-DRB4X5D2U9 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
HLA-DRB4X5D2U9 AC073073.2-201ENST00000609827 2578 ntBASIC2.65□□□□□ -1.98
HLA-DRB4X5D2U9 TTN-204ENST00000360870 18218 ntTSL 5 BASIC2.65□□□□□ -1.98
HLA-DRB4X5D2U9 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.98
HLA-DRB4X5D2U9 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
HLA-DRB4X5D2U9 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.99
HLA-DRB4X5D2U9 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
HLA-DRB4X5D2U9 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.99
HLA-DRB4X5D2U9 SNORA31-201ENST00000362607 130 ntBASIC2.65□□□□□ -1.99
HLA-DRB4X5D2U9 RNA5SP51-201ENST00000364750 119 ntBASIC2.65□□□□□ -1.99
HLA-DRB4X5D2U9 MIR591-201ENST00000385290 95 ntBASIC2.65□□□□□ -1.99
HLA-DRB4X5D2U9 AC093578.1-201ENST00000415219 368 ntBASIC2.65□□□□□ -1.99
HLA-DRB4X5D2U9 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC2.65□□□□□ -1.99
HLA-DRB4X5D2U9 AL035423.1-201ENST00000420331 213 ntBASIC2.65□□□□□ -1.99
HLA-DRB4X5D2U9 SDCBPP2-201ENST00000424643 885 ntBASIC2.65□□□□□ -1.99
HLA-DRB4X5D2U9 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC2.65□□□□□ -1.99
HLA-DRB4X5D2U9 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC2.65□□□□□ -1.99
HLA-DRB4X5D2U9 AL445584.1-201ENST00000431451 330 ntBASIC2.65□□□□□ -1.99
HLA-DRB4X5D2U9 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC2.65□□□□□ -1.99
HLA-DRB4X5D2U9 ELOCP3-201ENST00000439303 348 ntBASIC2.65□□□□□ -1.99
HLA-DRB4X5D2U9 AL353898.1-201ENST00000444055 238 ntBASIC2.65□□□□□ -1.99
HLA-DRB4X5D2U9 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.65□□□□□ -1.99
HLA-DRB4X5D2U9 AC239367.2-201ENST00000447309 705 ntBASIC2.65□□□□□ -1.99
HLA-DRB4X5D2U9 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC2.65□□□□□ -1.99
HLA-DRB4X5D2U9 MORF4L1P4-201ENST00000450245 976 ntBASIC2.65□□□□□ -1.99
HLA-DRB4X5D2U9 AC092754.2-201ENST00000463506 460 ntBASIC2.65□□□□□ -1.99
HLA-DRB4X5D2U9 RPL23AP12-201ENST00000467573 473 ntBASIC2.65□□□□□ -1.99
HLA-DRB4X5D2U9 RN7SL594P-201ENST00000470590 287 ntBASIC2.65□□□□□ -1.99
HLA-DRB4X5D2U9 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC2.65□□□□□ -1.99
HLA-DRB4X5D2U9 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC2.65□□□□□ -1.99
HLA-DRB4X5D2U9 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC2.65□□□□□ -1.99
HLA-DRB4X5D2U9 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC2.65□□□□□ -1.99
HLA-DRB4X5D2U9 FABP5P12-201ENST00000515543 389 ntBASIC2.65□□□□□ -1.99
HLA-DRB4X5D2U9 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC2.65□□□□□ -1.99
HLA-DRB4X5D2U9 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC2.65□□□□□ -1.99
HLA-DRB4X5D2U9 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC2.65□□□□□ -1.99
HLA-DRB4X5D2U9 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.65□□□□□ -1.99
HLA-DRB4X5D2U9 AP000919.1-202ENST00000581139 1264 ntBASIC2.65□□□□□ -1.99
HLA-DRB4X5D2U9 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC2.65□□□□□ -1.99
HLA-DRB4X5D2U9 AC020914.6-201ENST00000594327 272 ntBASIC2.65□□□□□ -1.99
HLA-DRB4X5D2U9 AL020997.2-201ENST00000602607 184 ntBASIC2.65□□□□□ -1.99
HLA-DRB4X5D2U9 AC011468.4-201ENST00000603942 409 ntBASIC2.65□□□□□ -1.99
HLA-DRB4X5D2U9 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
HLA-DRB4X5D2U9 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC2.65□□□□□ -1.99
HLA-DRB4X5D2U9 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC2.65□□□□□ -1.99
HLA-DRB4X5D2U9 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
HLA-DRB4X5D2U9 SRP72P2-201ENST00000344851 1979 ntBASIC2.65□□□□□ -1.99
HLA-DRB4X5D2U9 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.65□□□□□ -1.99
HLA-DRB4X5D2U9 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
HLA-DRB4X5D2U9 MFF-206ENST00000392059 1710 ntTSL 5 BASIC2.65□□□□□ -1.99
HLA-DRB4X5D2U9 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
HLA-DRB4X5D2U9 AC007656.2-201ENST00000624902 4547 ntBASIC2.64□□□□□ -1.99
HLA-DRB4X5D2U9 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
HLA-DRB4X5D2U9 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
HLA-DRB4X5D2U9 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
HLA-DRB4X5D2U9 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
HLA-DRB4X5D2U9 MIR30E-201ENST00000362104 92 ntBASIC2.64□□□□□ -1.99
HLA-DRB4X5D2U9 SNORD9-201ENST00000362566 104 ntBASIC2.64□□□□□ -1.99
HLA-DRB4X5D2U9 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
HLA-DRB4X5D2U9 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
HLA-DRB4X5D2U9 SNORD3H-201ENST00000384486 214 ntBASIC2.64□□□□□ -1.99
HLA-DRB4X5D2U9 MIR554-201ENST00000384874 96 ntBASIC2.64□□□□□ -1.99
HLA-DRB4X5D2U9 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC2.64□□□□□ -1.99
HLA-DRB4X5D2U9 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC2.64□□□□□ -1.99
HLA-DRB4X5D2U9 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC2.64□□□□□ -1.99
HLA-DRB4X5D2U9 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC2.64□□□□□ -1.99
HLA-DRB4X5D2U9 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC2.64□□□□□ -1.99
HLA-DRB4X5D2U9 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms