Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SHANK2Q9UPX8 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.86□□□□□ -1.63
SHANK2Q9UPX8 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
SHANK2Q9UPX8 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SHANK2Q9UPX8 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.85□□□□□ -1.63
SHANK2Q9UPX8 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SHANK2Q9UPX8 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SHANK2Q9UPX8 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SHANK2Q9UPX8 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.85□□□□□ -1.63
SHANK2Q9UPX8 AC073325.2-201ENST00000339545 159 ntBASIC4.85□□□□□ -1.63
SHANK2Q9UPX8 OR56A5-201ENST00000340110 738 ntBASIC4.85□□□□□ -1.63
SHANK2Q9UPX8 ZNF603P-201ENST00000405613 487 ntBASIC4.85□□□□□ -1.63
SHANK2Q9UPX8 RPL35AP12-201ENST00000425362 338 ntBASIC4.85□□□□□ -1.63
SHANK2Q9UPX8 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC4.85□□□□□ -1.63
SHANK2Q9UPX8 VN1R104P-201ENST00000505115 1009 ntBASIC4.85□□□□□ -1.63
SHANK2Q9UPX8 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC4.85□□□□□ -1.63
SHANK2Q9UPX8 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.85□□□□□ -1.63
SHANK2Q9UPX8 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.85□□□□□ -1.63
SHANK2Q9UPX8 HMGB1P50-201ENST00000605814 607 ntBASIC4.85□□□□□ -1.63
SHANK2Q9UPX8 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SHANK2Q9UPX8 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.85□□□□□ -1.63
SHANK2Q9UPX8 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SHANK2Q9UPX8 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SHANK2Q9UPX8 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.84□□□□□ -1.63
SHANK2Q9UPX8 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
SHANK2Q9UPX8 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SHANK2Q9UPX8 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
SHANK2Q9UPX8 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.84□□□□□ -1.63
SHANK2Q9UPX8 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
SHANK2Q9UPX8 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
SHANK2Q9UPX8 OR6K4P-201ENST00000423179 955 ntBASIC4.84□□□□□ -1.63
SHANK2Q9UPX8 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.84□□□□□ -1.63
SHANK2Q9UPX8 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.84□□□□□ -1.63
SHANK2Q9UPX8 ELOCP23-201ENST00000452014 332 ntBASIC4.84□□□□□ -1.63
SHANK2Q9UPX8 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SHANK2Q9UPX8 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.84□□□□□ -1.63
SHANK2Q9UPX8 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
SHANK2Q9UPX8 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC4.84□□□□□ -1.64
SHANK2Q9UPX8 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
SHANK2Q9UPX8 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.83□□□□□ -1.64
SHANK2Q9UPX8 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
SHANK2Q9UPX8 GCNT6-201ENST00000379591 934 ntBASIC4.83□□□□□ -1.64
SHANK2Q9UPX8 LAP3P1-201ENST00000403648 294 ntBASIC4.83□□□□□ -1.64
SHANK2Q9UPX8 AL513174.1-201ENST00000423182 629 ntBASIC4.83□□□□□ -1.64
SHANK2Q9UPX8 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.83□□□□□ -1.64
SHANK2Q9UPX8 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.83□□□□□ -1.64
SHANK2Q9UPX8 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.83□□□□□ -1.64
SHANK2Q9UPX8 AC087312.1-201ENST00000471411 480 ntBASIC4.83□□□□□ -1.64
SHANK2Q9UPX8 AC008885.1-201ENST00000514930 301 ntBASIC4.83□□□□□ -1.64
SHANK2Q9UPX8 NARSP2-201ENST00000518524 679 ntBASIC4.83□□□□□ -1.64
SHANK2Q9UPX8 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SHANK2Q9UPX8 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.83□□□□□ -1.64
SHANK2Q9UPX8 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.83□□□□□ -1.64
SHANK2Q9UPX8 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.83□□□□□ -1.64
SHANK2Q9UPX8 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.83□□□□□ -1.64
SHANK2Q9UPX8 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.83□□□□□ -1.64
SHANK2Q9UPX8 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.83□□□□□ -1.64
SHANK2Q9UPX8 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.83□□□□□ -1.64
SHANK2Q9UPX8 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SHANK2Q9UPX8 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SHANK2Q9UPX8 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
SHANK2Q9UPX8 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SHANK2Q9UPX8 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SHANK2Q9UPX8 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.83□□□□□ -1.64
SHANK2Q9UPX8 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.83□□□□□ -1.64
SHANK2Q9UPX8 FAM35DP-201ENST00000323387 2712 ntBASIC4.83□□□□□ -1.64
SHANK2Q9UPX8 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.83□□□□□ -1.64
SHANK2Q9UPX8 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
SHANK2Q9UPX8 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SHANK2Q9UPX8 AC104297.1-201ENST00000393779 870 ntBASIC4.82□□□□□ -1.64
SHANK2Q9UPX8 RNA5SP293-201ENST00000410527 113 ntBASIC4.82□□□□□ -1.64
SHANK2Q9UPX8 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC4.82□□□□□ -1.64
SHANK2Q9UPX8 AL139132.1-201ENST00000431587 344 ntBASIC4.82□□□□□ -1.64
SHANK2Q9UPX8 S100A11P1-201ENST00000477525 312 ntBASIC4.82□□□□□ -1.64
SHANK2Q9UPX8 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.82□□□□□ -1.64
SHANK2Q9UPX8 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.82□□□□□ -1.64
SHANK2Q9UPX8 PSMA2P1-201ENST00000526365 646 ntBASIC4.82□□□□□ -1.64
SHANK2Q9UPX8 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.82□□□□□ -1.64
SHANK2Q9UPX8 AC015917.1-201ENST00000579654 510 ntBASIC4.82□□□□□ -1.64
SHANK2Q9UPX8 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.82□□□□□ -1.64
SHANK2Q9UPX8 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC4.82□□□□□ -1.64
SHANK2Q9UPX8 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SHANK2Q9UPX8 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SHANK2Q9UPX8 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SHANK2Q9UPX8 AL445529.1-201ENST00000398713 389 ntBASIC4.81□□□□□ -1.64
SHANK2Q9UPX8 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.81□□□□□ -1.64
SHANK2Q9UPX8 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.81□□□□□ -1.64
SHANK2Q9UPX8 NPM1P13-201ENST00000452663 865 ntBASIC4.81□□□□□ -1.64
SHANK2Q9UPX8 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC4.81□□□□□ -1.64
SHANK2Q9UPX8 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.81□□□□□ -1.64
SHANK2Q9UPX8 AC112503.1-201ENST00000608436 391 ntBASIC4.81□□□□□ -1.64
SHANK2Q9UPX8 AC018692.3-201ENST00000623929 123 ntBASIC4.81□□□□□ -1.64
SHANK2Q9UPX8 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
SHANK2Q9UPX8 AL359693.1-201ENST00000614959 2407 ntBASIC4.81□□□□□ -1.64
SHANK2Q9UPX8 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
SHANK2Q9UPX8 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.81□□□□□ -1.64
SHANK2Q9UPX8 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SHANK2Q9UPX8 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC4.81□□□□□ -1.64
SHANK2Q9UPX8 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC4.81□□□□□ -1.64
SHANK2Q9UPX8 AL121877.1-201ENST00000453704 622 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 148.7 ms