Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 RNU6-821P-201ENST00000390995 107 ntBASIC5.56□□□□□ -1.52
CHMP4AQ9BY43 RPL23AP26-201ENST00000412728 464 ntBASIC5.56□□□□□ -1.52
CHMP4AQ9BY43 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC5.56□□□□□ -1.52
CHMP4AQ9BY43 CRYBB2P1-203ENST00000415709 538 ntBASIC5.56□□□□□ -1.52
CHMP4AQ9BY43 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC5.56□□□□□ -1.52
CHMP4AQ9BY43 AL157831.1-201ENST00000426134 473 ntBASIC5.56□□□□□ -1.52
CHMP4AQ9BY43 RPS7P2-201ENST00000435134 607 ntBASIC5.56□□□□□ -1.52
CHMP4AQ9BY43 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC5.56□□□□□ -1.52
CHMP4AQ9BY43 CYCSP53-201ENST00000455540 265 ntBASIC5.56□□□□□ -1.52
CHMP4AQ9BY43 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.56□□□□□ -1.52
CHMP4AQ9BY43 XACT-201ENST00000468762 497 ntTSL 5 BASIC5.56□□□□□ -1.52
CHMP4AQ9BY43 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.56□□□□□ -1.52
CHMP4AQ9BY43 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC5.56□□□□□ -1.52
CHMP4AQ9BY43 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC5.56□□□□□ -1.52
CHMP4AQ9BY43 IGKV2D-23-201ENST00000518179 286 ntBASIC5.56□□□□□ -1.52
CHMP4AQ9BY43 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.56□□□□□ -1.52
CHMP4AQ9BY43 AP003730.1-201ENST00000524605 285 ntBASIC5.56□□□□□ -1.52
CHMP4AQ9BY43 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.56□□□□□ -1.52
CHMP4AQ9BY43 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC5.56□□□□□ -1.52
CHMP4AQ9BY43 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC5.56□□□□□ -1.52
CHMP4AQ9BY43 AL020997.3-201ENST00000602843 359 ntBASIC5.56□□□□□ -1.52
CHMP4AQ9BY43 RPAP2P1-201ENST00000603626 1168 ntBASIC5.56□□□□□ -1.52
CHMP4AQ9BY43 AL163642.2-201ENST00000604722 1019 ntBASIC5.56□□□□□ -1.52
CHMP4AQ9BY43 AC092653.1-201ENST00000608509 531 ntBASIC5.56□□□□□ -1.52
CHMP4AQ9BY43 AL159169.3-201ENST00000608871 561 ntBASIC5.56□□□□□ -1.52
CHMP4AQ9BY43 AC083809.1-201ENST00000615051 472 ntBASIC5.56□□□□□ -1.52
CHMP4AQ9BY43 AC090116.1-201ENST00000615679 446 ntBASIC5.56□□□□□ -1.52
CHMP4AQ9BY43 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CHMP4AQ9BY43 AC073968.1-201ENST00000618594 637 ntBASIC5.56□□□□□ -1.52
CHMP4AQ9BY43 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC5.56□□□□□ -1.52
CHMP4AQ9BY43 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC5.56□□□□□ -1.52
CHMP4AQ9BY43 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CHMP4AQ9BY43 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CHMP4AQ9BY43 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC5.56□□□□□ -1.52
CHMP4AQ9BY43 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CHMP4AQ9BY43 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.55□□□□□ -1.52
CHMP4AQ9BY43 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CHMP4AQ9BY43 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CHMP4AQ9BY43 MIR195-201ENST00000385194 87 ntBASIC5.55□□□□□ -1.52
CHMP4AQ9BY43 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC5.55□□□□□ -1.52
CHMP4AQ9BY43 RPS7P15-201ENST00000415804 584 ntBASIC5.55□□□□□ -1.52
CHMP4AQ9BY43 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.55□□□□□ -1.52
CHMP4AQ9BY43 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC5.55□□□□□ -1.52
CHMP4AQ9BY43 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.55□□□□□ -1.52
CHMP4AQ9BY43 OFD1P12Y-201ENST00000427963 1207 ntBASIC5.55□□□□□ -1.52
CHMP4AQ9BY43 AC017083.1-201ENST00000428093 483 ntBASIC5.55□□□□□ -1.52
CHMP4AQ9BY43 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC5.55□□□□□ -1.52
CHMP4AQ9BY43 OFD1P13Y-201ENST00000431179 1232 ntBASIC5.55□□□□□ -1.52
CHMP4AQ9BY43 MRPS18BP2-201ENST00000434310 759 ntBASIC5.55□□□□□ -1.52
CHMP4AQ9BY43 AL356276.2-201ENST00000435919 558 ntBASIC5.55□□□□□ -1.52
CHMP4AQ9BY43 RPL7P1-201ENST00000468161 747 ntBASIC5.55□□□□□ -1.52
CHMP4AQ9BY43 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC5.55□□□□□ -1.52
CHMP4AQ9BY43 VPS26AP1-201ENST00000483197 979 ntBASIC5.55□□□□□ -1.52
CHMP4AQ9BY43 AC106872.2-201ENST00000494303 480 ntBASIC5.55□□□□□ -1.52
CHMP4AQ9BY43 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC5.55□□□□□ -1.52
CHMP4AQ9BY43 AP003355.1-201ENST00000518956 587 ntBASIC5.55□□□□□ -1.52
CHMP4AQ9BY43 AC092451.2-201ENST00000538746 658 ntBASIC5.55□□□□□ -1.52
CHMP4AQ9BY43 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC5.55□□□□□ -1.52
CHMP4AQ9BY43 MIR4697-201ENST00000582977 78 ntBASIC5.55□□□□□ -1.52
CHMP4AQ9BY43 MIR3138-201ENST00000585238 82 ntBASIC5.55□□□□□ -1.52
CHMP4AQ9BY43 MKKS-203ENST00000609375 882 ntTSL 2 BASIC5.55□□□□□ -1.52
CHMP4AQ9BY43 MIR8059-201ENST00000620427 81 ntBASIC5.55□□□□□ -1.52
CHMP4AQ9BY43 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC5.55□□□□□ -1.52
CHMP4AQ9BY43 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC5.55□□□□□ -1.52
CHMP4AQ9BY43 AC026634.1-201ENST00000634369 198 ntBASIC5.55□□□□□ -1.52
CHMP4AQ9BY43 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CHMP4AQ9BY43 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC5.55□□□□□ -1.52
CHMP4AQ9BY43 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CHMP4AQ9BY43 TMEM161BP1-201ENST00000457388 1457 ntBASIC5.54□□□□□ -1.52
CHMP4AQ9BY43 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.54□□□□□ -1.52
CHMP4AQ9BY43 RPL32P3-201ENST00000359025 275 ntBASIC5.54□□□□□ -1.52
CHMP4AQ9BY43 RNU1-132P-201ENST00000364300 164 ntBASIC5.54□□□□□ -1.52
CHMP4AQ9BY43 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CHMP4AQ9BY43 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CHMP4AQ9BY43 AL049693.1-201ENST00000402760 611 ntBASIC5.54□□□□□ -1.52
CHMP4AQ9BY43 RPL7P27-201ENST00000403775 720 ntBASIC5.54□□□□□ -1.52
CHMP4AQ9BY43 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.54□□□□□ -1.52
CHMP4AQ9BY43 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC5.54□□□□□ -1.52
CHMP4AQ9BY43 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC5.54□□□□□ -1.52
CHMP4AQ9BY43 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC5.54□□□□□ -1.52
CHMP4AQ9BY43 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC5.54□□□□□ -1.52
CHMP4AQ9BY43 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC5.54□□□□□ -1.52
CHMP4AQ9BY43 RPL35AP15-201ENST00000468042 339 ntBASIC5.54□□□□□ -1.52
CHMP4AQ9BY43 AC022034.3-201ENST00000471393 478 ntBASIC5.54□□□□□ -1.52
CHMP4AQ9BY43 AC008958.1-201ENST00000511047 682 ntBASIC5.54□□□□□ -1.52
CHMP4AQ9BY43 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC5.54□□□□□ -1.52
CHMP4AQ9BY43 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC5.54□□□□□ -1.52
CHMP4AQ9BY43 SULT1C2P1-202ENST00000562418 459 ntBASIC5.54□□□□□ -1.52
CHMP4AQ9BY43 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC5.54□□□□□ -1.52
CHMP4AQ9BY43 AC023575.1-201ENST00000580510 358 ntBASIC5.54□□□□□ -1.52
CHMP4AQ9BY43 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC5.54□□□□□ -1.52
CHMP4AQ9BY43 AC092650.2-201ENST00000619984 902 ntBASIC5.54□□□□□ -1.52
CHMP4AQ9BY43 AC005086.4-201ENST00000623065 213 ntBASIC5.54□□□□□ -1.52
CHMP4AQ9BY43 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CHMP4AQ9BY43 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC5.54□□□□□ -1.52
CHMP4AQ9BY43 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC5.54□□□□□ -1.52
CHMP4AQ9BY43 AL672296.1-201ENST00000427780 2158 ntBASIC5.54□□□□□ -1.52
CHMP4AQ9BY43 AL158163.1-201ENST00000603915 1649 ntBASIC5.54□□□□□ -1.52
CHMP4AQ9BY43 AC002546.1-201ENST00000588041 2504 ntBASIC5.53□□□□□ -1.52
CHMP4AQ9BY43 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms