Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
IFT140Q96RY7 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
IFT140Q96RY7 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
IFT140Q96RY7 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
IFT140Q96RY7 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.26□□□□□ -1.57
IFT140Q96RY7 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC5.26□□□□□ -1.57
IFT140Q96RY7 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC5.26□□□□□ -1.57
IFT140Q96RY7 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.26□□□□□ -1.57
IFT140Q96RY7 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
IFT140Q96RY7 AL451142.2-201ENST00000429076 2090 ntBASIC5.26□□□□□ -1.57
IFT140Q96RY7 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
IFT140Q96RY7 AC073508.1-201ENST00000428866 656 ntBASIC5.26□□□□□ -1.57
IFT140Q96RY7 FTLP19-201ENST00000433300 394 ntBASIC5.26□□□□□ -1.57
IFT140Q96RY7 AC112492.1-201ENST00000449607 712 ntBASIC5.26□□□□□ -1.57
IFT140Q96RY7 AL513124.1-201ENST00000450410 614 ntBASIC5.26□□□□□ -1.57
IFT140Q96RY7 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC5.26□□□□□ -1.57
IFT140Q96RY7 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.26□□□□□ -1.57
IFT140Q96RY7 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
IFT140Q96RY7 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC5.26□□□□□ -1.57
IFT140Q96RY7 AC009948.4-201ENST00000604692 675 ntBASIC5.26□□□□□ -1.57
IFT140Q96RY7 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC5.26□□□□□ -1.57
IFT140Q96RY7 AL596275.2-204ENST00000641628 552 ntBASIC5.26□□□□□ -1.57
IFT140Q96RY7 AL596275.2-206ENST00000641957 626 ntBASIC5.26□□□□□ -1.57
IFT140Q96RY7 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
IFT140Q96RY7 AC096644.4-201ENST00000563417 2912 ntBASIC5.25□□□□□ -1.57
IFT140Q96RY7 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
IFT140Q96RY7 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
IFT140Q96RY7 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
IFT140Q96RY7 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
IFT140Q96RY7 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
IFT140Q96RY7 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC5.25□□□□□ -1.57
IFT140Q96RY7 AL645937.1-202ENST00000421799 937 ntBASIC5.25□□□□□ -1.57
IFT140Q96RY7 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC5.25□□□□□ -1.57
IFT140Q96RY7 AC069540.1-201ENST00000446320 988 ntBASIC5.25□□□□□ -1.57
IFT140Q96RY7 AC128713.1-201ENST00000471495 306 ntBASIC5.25□□□□□ -1.57
IFT140Q96RY7 UBL5P3-201ENST00000475112 231 ntBASIC5.25□□□□□ -1.57
IFT140Q96RY7 AC025445.1-201ENST00000502728 300 ntBASIC5.25□□□□□ -1.57
IFT140Q96RY7 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC5.25□□□□□ -1.57
IFT140Q96RY7 BTF3L4P4-201ENST00000506381 449 ntBASIC5.25□□□□□ -1.57
IFT140Q96RY7 SETP12-201ENST00000514068 805 ntBASIC5.25□□□□□ -1.57
IFT140Q96RY7 MIR4769-201ENST00000584126 77 ntBASIC5.25□□□□□ -1.57
IFT140Q96RY7 MAPK6PS3-201ENST00000403865 2162 ntBASIC5.24□□□□□ -1.57
IFT140Q96RY7 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
IFT140Q96RY7 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
IFT140Q96RY7 SCN1A-220ENST00000641603 12506 ntBASIC5.24□□□□□ -1.57
IFT140Q96RY7 MIR93-201ENST00000385024 80 ntBASIC5.24□□□□□ -1.57
IFT140Q96RY7 RNA5SP296-201ENST00000410523 111 ntBASIC5.24□□□□□ -1.57
IFT140Q96RY7 AC126124.2-201ENST00000413542 321 ntBASIC5.24□□□□□ -1.57
IFT140Q96RY7 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.24□□□□□ -1.57
IFT140Q96RY7 OR6C64P-201ENST00000419708 825 ntBASIC5.24□□□□□ -1.57
IFT140Q96RY7 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.24□□□□□ -1.57
IFT140Q96RY7 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC5.24□□□□□ -1.57
IFT140Q96RY7 OR5AP1P-201ENST00000529730 940 ntBASIC5.24□□□□□ -1.57
IFT140Q96RY7 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC5.24□□□□□ -1.57
IFT140Q96RY7 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC5.24□□□□□ -1.57
IFT140Q96RY7 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC5.24□□□□□ -1.57
IFT140Q96RY7 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC5.24□□□□□ -1.57
IFT140Q96RY7 AC021755.1-201ENST00000559747 1447 ntBASIC5.24□□□□□ -1.57
IFT140Q96RY7 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
IFT140Q96RY7 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
IFT140Q96RY7 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
IFT140Q96RY7 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
IFT140Q96RY7 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
IFT140Q96RY7 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
IFT140Q96RY7 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
IFT140Q96RY7 AC073325.2-201ENST00000339545 159 ntBASIC5.23□□□□□ -1.57
IFT140Q96RY7 JKAMPP1-201ENST00000413804 919 ntBASIC5.23□□□□□ -1.57
IFT140Q96RY7 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC5.23□□□□□ -1.57
IFT140Q96RY7 AC019097.1-201ENST00000424783 735 ntBASIC5.23□□□□□ -1.57
IFT140Q96RY7 RPL23AP82-202ENST00000427528 469 ntBASIC5.23□□□□□ -1.57
IFT140Q96RY7 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC5.23□□□□□ -1.57
IFT140Q96RY7 AC005229.2-201ENST00000456995 399 ntBASIC5.23□□□□□ -1.57
IFT140Q96RY7 CENPBD1P1-201ENST00000464061 469 ntBASIC5.23□□□□□ -1.57
IFT140Q96RY7 HMGB1P3-201ENST00000502802 616 ntBASIC5.23□□□□□ -1.57
IFT140Q96RY7 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC5.23□□□□□ -1.57
IFT140Q96RY7 COX6CP8-201ENST00000522620 226 ntBASIC5.23□□□□□ -1.57
IFT140Q96RY7 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC5.23□□□□□ -1.57
IFT140Q96RY7 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC5.23□□□□□ -1.57
IFT140Q96RY7 AC008638.3-201ENST00000603341 463 ntBASIC5.23□□□□□ -1.57
IFT140Q96RY7 AL122125.1-201ENST00000616999 600 ntBASIC5.23□□□□□ -1.57
IFT140Q96RY7 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
IFT140Q96RY7 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
IFT140Q96RY7 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC5.22□□□□□ -1.57
IFT140Q96RY7 HMGB3P22-202ENST00000451823 572 ntBASIC5.22□□□□□ -1.57
IFT140Q96RY7 AC117440.1-201ENST00000474107 571 ntBASIC5.22□□□□□ -1.57
IFT140Q96RY7 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC5.22□□□□□ -1.57
IFT140Q96RY7 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC5.22□□□□□ -1.57
IFT140Q96RY7 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.22□□□□□ -1.57
IFT140Q96RY7 PRELID3BP8-201ENST00000604148 295 ntBASIC5.22□□□□□ -1.57
IFT140Q96RY7 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
IFT140Q96RY7 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
IFT140Q96RY7 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC5.22□□□□□ -1.57
IFT140Q96RY7 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.57
IFT140Q96RY7 SNORD74.4-201ENST00000364129 80 ntBASIC5.21□□□□□ -1.58
IFT140Q96RY7 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
IFT140Q96RY7 RN7SKP56-201ENST00000410513 331 ntBASIC5.21□□□□□ -1.58
IFT140Q96RY7 NPM1P11-201ENST00000417106 855 ntBASIC5.21□□□□□ -1.58
IFT140Q96RY7 ZYG11AP1-201ENST00000430329 837 ntBASIC5.21□□□□□ -1.58
IFT140Q96RY7 FDX1P2-201ENST00000450769 375 ntBASIC5.21□□□□□ -1.58
IFT140Q96RY7 RPL23AP67-201ENST00000465341 474 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms