Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AC006116.5-201ENST00000591936 559 ntBASIC4.05□□□□□ -1.76
PDLIM5Q96HC4 AC008745.1-201ENST00000604064 271 ntBASIC4.05□□□□□ -1.76
PDLIM5Q96HC4 AC114781.5-201ENST00000615297 108 ntBASIC4.05□□□□□ -1.76
PDLIM5Q96HC4 AC068722.2-201ENST00000618734 544 ntBASIC4.05□□□□□ -1.76
PDLIM5Q96HC4 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.05□□□□□ -1.76
PDLIM5Q96HC4 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.05□□□□□ -1.76
PDLIM5Q96HC4 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
PDLIM5Q96HC4 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
PDLIM5Q96HC4 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PDLIM5Q96HC4 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.05□□□□□ -1.76
PDLIM5Q96HC4 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PDLIM5Q96HC4 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PDLIM5Q96HC4 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
PDLIM5Q96HC4 RNA5SP189-201ENST00000364920 115 ntBASIC4.04□□□□□ -1.76
PDLIM5Q96HC4 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.04□□□□□ -1.76
PDLIM5Q96HC4 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.04□□□□□ -1.76
PDLIM5Q96HC4 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
PDLIM5Q96HC4 MIR937-201ENST00000401271 86 ntBASIC4.04□□□□□ -1.76
PDLIM5Q96HC4 SNORA3C-201ENST00000408792 125 ntBASIC4.04□□□□□ -1.76
PDLIM5Q96HC4 RPL23AP26-201ENST00000412728 464 ntBASIC4.04□□□□□ -1.76
PDLIM5Q96HC4 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.04□□□□□ -1.76
PDLIM5Q96HC4 EI24P1-201ENST00000416584 867 ntBASIC4.04□□□□□ -1.76
PDLIM5Q96HC4 AC009480.2-201ENST00000422916 432 ntBASIC4.04□□□□□ -1.76
PDLIM5Q96HC4 COX6B1P7-201ENST00000430845 235 ntBASIC4.04□□□□□ -1.76
PDLIM5Q96HC4 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.04□□□□□ -1.76
PDLIM5Q96HC4 B3GNT2P1-201ENST00000434960 952 ntBASIC4.04□□□□□ -1.76
PDLIM5Q96HC4 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.04□□□□□ -1.76
PDLIM5Q96HC4 AL121877.1-201ENST00000453704 622 ntBASIC4.04□□□□□ -1.76
PDLIM5Q96HC4 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.04□□□□□ -1.76
PDLIM5Q96HC4 PRDX3P4-201ENST00000470828 747 ntBASIC4.04□□□□□ -1.76
PDLIM5Q96HC4 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC4.04□□□□□ -1.76
PDLIM5Q96HC4 AC005921.1-201ENST00000510589 286 ntBASIC4.04□□□□□ -1.76
PDLIM5Q96HC4 AC093840.1-201ENST00000511599 336 ntBASIC4.04□□□□□ -1.76
PDLIM5Q96HC4 AC005798.1-201ENST00000513715 387 ntBASIC4.04□□□□□ -1.76
PDLIM5Q96HC4 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.04□□□□□ -1.76
PDLIM5Q96HC4 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC4.04□□□□□ -1.76
PDLIM5Q96HC4 ZKSCAN7P1-201ENST00000543668 673 ntBASIC4.04□□□□□ -1.76
PDLIM5Q96HC4 CYB5AP5-201ENST00000549779 389 ntBASIC4.04□□□□□ -1.76
PDLIM5Q96HC4 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.04□□□□□ -1.76
PDLIM5Q96HC4 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.04□□□□□ -1.76
PDLIM5Q96HC4 AC079171.1-201ENST00000568788 914 ntBASIC4.04□□□□□ -1.76
PDLIM5Q96HC4 AC022655.2-201ENST00000577280 318 ntBASIC4.04□□□□□ -1.76
PDLIM5Q96HC4 AC012417.1-201ENST00000582307 1039 ntBASIC4.04□□□□□ -1.76
PDLIM5Q96HC4 AC010928.3-201ENST00000587712 541 ntBASIC4.04□□□□□ -1.76
PDLIM5Q96HC4 AL390816.3-201ENST00000604527 1066 ntBASIC4.04□□□□□ -1.76
PDLIM5Q96HC4 AC002487.1-201ENST00000604565 994 ntBASIC4.04□□□□□ -1.76
PDLIM5Q96HC4 AL049634.3-201ENST00000604968 457 ntBASIC4.04□□□□□ -1.76
PDLIM5Q96HC4 AC078899.5-201ENST00000612475 178 ntBASIC4.04□□□□□ -1.76
PDLIM5Q96HC4 AC026368.1-201ENST00000614934 690 ntBASIC4.04□□□□□ -1.76
PDLIM5Q96HC4 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.04□□□□□ -1.76
PDLIM5Q96HC4 AC011944.2-201ENST00000624440 683 ntBASIC4.04□□□□□ -1.76
PDLIM5Q96HC4 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
PDLIM5Q96HC4 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
PDLIM5Q96HC4 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PDLIM5Q96HC4 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
PDLIM5Q96HC4 AC010300.1-201ENST00000600671 5134 ntBASIC4.04□□□□□ -1.76
PDLIM5Q96HC4 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
PDLIM5Q96HC4 AC116667.1-201ENST00000604855 2072 ntBASIC4.04□□□□□ -1.76
PDLIM5Q96HC4 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.04□□□□□ -1.76
PDLIM5Q96HC4 MTND5P31-201ENST00000419366 1374 ntBASIC4.03□□□□□ -1.76
PDLIM5Q96HC4 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.03□□□□□ -1.76
PDLIM5Q96HC4 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.03□□□□□ -1.76
PDLIM5Q96HC4 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.03□□□□□ -1.76
PDLIM5Q96HC4 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
PDLIM5Q96HC4 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.03□□□□□ -1.76
PDLIM5Q96HC4 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
PDLIM5Q96HC4 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
PDLIM5Q96HC4 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PDLIM5Q96HC4 RNU6-207P-201ENST00000384137 107 ntBASIC4.03□□□□□ -1.76
PDLIM5Q96HC4 RNU6-1226P-201ENST00000384317 107 ntBASIC4.03□□□□□ -1.76
PDLIM5Q96HC4 AL121978.1-201ENST00000402778 359 ntBASIC4.03□□□□□ -1.76
PDLIM5Q96HC4 SFR1P1-201ENST00000403720 688 ntBASIC4.03□□□□□ -1.76
PDLIM5Q96HC4 RNU6-584P-201ENST00000410350 95 ntBASIC4.03□□□□□ -1.76
PDLIM5Q96HC4 JKAMPP1-201ENST00000413804 919 ntBASIC4.03□□□□□ -1.76
PDLIM5Q96HC4 TAF13P2-201ENST00000416876 286 ntBASIC4.03□□□□□ -1.76
PDLIM5Q96HC4 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.03□□□□□ -1.76
PDLIM5Q96HC4 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.03□□□□□ -1.76
PDLIM5Q96HC4 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.03□□□□□ -1.76
PDLIM5Q96HC4 RPP40P1-201ENST00000426762 456 ntBASIC4.03□□□□□ -1.76
PDLIM5Q96HC4 AL358472.1-201ENST00000431295 329 ntBASIC4.03□□□□□ -1.76
PDLIM5Q96HC4 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PDLIM5Q96HC4 AC044797.1-201ENST00000445744 679 ntBASIC4.03□□□□□ -1.76
PDLIM5Q96HC4 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.03□□□□□ -1.76
PDLIM5Q96HC4 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.03□□□□□ -1.76
PDLIM5Q96HC4 RNU7-140P-201ENST00000459546 60 ntBASIC4.03□□□□□ -1.76
PDLIM5Q96HC4 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.03□□□□□ -1.76
PDLIM5Q96HC4 RN7SL481P-201ENST00000477764 299 ntBASIC4.03□□□□□ -1.76
PDLIM5Q96HC4 AC104982.1-201ENST00000478775 574 ntBASIC4.03□□□□□ -1.76
PDLIM5Q96HC4 TMED11P-201ENST00000479478 690 ntBASIC4.03□□□□□ -1.76
PDLIM5Q96HC4 AF213884.1-201ENST00000488102 463 ntBASIC4.03□□□□□ -1.76
PDLIM5Q96HC4 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.03□□□□□ -1.76
PDLIM5Q96HC4 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.03□□□□□ -1.76
PDLIM5Q96HC4 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PDLIM5Q96HC4 RNA5SP309-201ENST00000516670 106 ntBASIC4.03□□□□□ -1.76
PDLIM5Q96HC4 IGHV3-32-201ENST00000519182 355 ntBASIC4.03□□□□□ -1.76
PDLIM5Q96HC4 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.03□□□□□ -1.76
PDLIM5Q96HC4 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.03□□□□□ -1.76
PDLIM5Q96HC4 AC090281.1-201ENST00000523019 276 ntBASIC4.03□□□□□ -1.76
PDLIM5Q96HC4 AC087894.1-201ENST00000538359 518 ntBASIC4.03□□□□□ -1.76
PDLIM5Q96HC4 AC092470.1-201ENST00000546187 132 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms