Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 ZNF663P-202ENST00000641770 1131 ntBASIC3.93□□□□□ -1.78
PTP4A1Q93096 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC3.93□□□□□ -1.78
PTP4A1Q93096 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PTP4A1Q93096 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
PTP4A1Q93096 AL365440.1-201ENST00000436135 2167 ntBASIC3.93□□□□□ -1.78
PTP4A1Q93096 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PTP4A1Q93096 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
PTP4A1Q93096 AC012618.3-205ENST00000637896 1496 ntBASIC3.92□□□□□ -1.78
PTP4A1Q93096 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
PTP4A1Q93096 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PTP4A1Q93096 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.92□□□□□ -1.78
PTP4A1Q93096 AF127577.6-201ENST00000623352 2191 ntBASIC3.92□□□□□ -1.78
PTP4A1Q93096 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PTP4A1Q93096 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PTP4A1Q93096 AC079741.1-201ENST00000321498 212 ntBASIC3.92□□□□□ -1.78
PTP4A1Q93096 SNORA70F-201ENST00000384142 135 ntBASIC3.92□□□□□ -1.78
PTP4A1Q93096 MIR3065-201ENST00000390137 79 ntBASIC3.92□□□□□ -1.78
PTP4A1Q93096 RPS16P5-201ENST00000406501 404 ntBASIC3.92□□□□□ -1.78
PTP4A1Q93096 RPL31-204ENST00000409038 817 ntTSL 2 BASIC3.92□□□□□ -1.78
PTP4A1Q93096 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PTP4A1Q93096 RPS7P15-201ENST00000415804 584 ntBASIC3.92□□□□□ -1.78
PTP4A1Q93096 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.92□□□□□ -1.78
PTP4A1Q93096 AL139095.3-201ENST00000419672 1203 ntBASIC3.92□□□□□ -1.78
PTP4A1Q93096 DPRXP1-201ENST00000426312 460 ntBASIC3.92□□□□□ -1.78
PTP4A1Q93096 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.92□□□□□ -1.78
PTP4A1Q93096 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.92□□□□□ -1.78
PTP4A1Q93096 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC3.92□□□□□ -1.78
PTP4A1Q93096 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC3.92□□□□□ -1.78
PTP4A1Q93096 AC114495.1-201ENST00000441274 436 ntBASIC3.92□□□□□ -1.78
PTP4A1Q93096 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.92□□□□□ -1.78
PTP4A1Q93096 HMGN1P5-201ENST00000448591 263 ntBASIC3.92□□□□□ -1.78
PTP4A1Q93096 AC073264.2-201ENST00000448886 166 ntBASIC3.92□□□□□ -1.78
PTP4A1Q93096 NPM1P13-201ENST00000452663 865 ntBASIC3.92□□□□□ -1.78
PTP4A1Q93096 FABP3P2-201ENST00000453169 399 ntBASIC3.92□□□□□ -1.78
PTP4A1Q93096 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.92□□□□□ -1.78
PTP4A1Q93096 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC3.92□□□□□ -1.78
PTP4A1Q93096 F11-205ENST00000492972 1204 ntTSL 2 BASIC3.92□□□□□ -1.78
PTP4A1Q93096 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.92□□□□□ -1.78
PTP4A1Q93096 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.92□□□□□ -1.78
PTP4A1Q93096 AC112198.4-201ENST00000515450 351 ntBASIC3.92□□□□□ -1.78
PTP4A1Q93096 SNORA70.14-201ENST00000516205 110 ntBASIC3.92□□□□□ -1.78
PTP4A1Q93096 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.92□□□□□ -1.78
PTP4A1Q93096 AC008802.1-201ENST00000519121 791 ntBASIC3.92□□□□□ -1.78
PTP4A1Q93096 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.92□□□□□ -1.78
PTP4A1Q93096 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.92□□□□□ -1.78
PTP4A1Q93096 AC009101.1-201ENST00000568135 242 ntBASIC3.92□□□□□ -1.78
PTP4A1Q93096 AC069061.3-201ENST00000582254 823 ntBASIC3.92□□□□□ -1.78
PTP4A1Q93096 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.92□□□□□ -1.78
PTP4A1Q93096 SNORD84-203ENST00000584275 78 ntBASIC3.92□□□□□ -1.78
PTP4A1Q93096 DNAJC19P3-201ENST00000594491 331 ntBASIC3.92□□□□□ -1.78
PTP4A1Q93096 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.92□□□□□ -1.78
PTP4A1Q93096 AL133243.1-201ENST00000614487 366 ntBASIC3.92□□□□□ -1.78
PTP4A1Q93096 AL512427.1-201ENST00000618593 349 ntBASIC3.92□□□□□ -1.78
PTP4A1Q93096 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.92□□□□□ -1.78
PTP4A1Q93096 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.92□□□□□ -1.78
PTP4A1Q93096 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
PTP4A1Q93096 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PTP4A1Q93096 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
PTP4A1Q93096 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.92□□□□□ -1.78
PTP4A1Q93096 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.92□□□□□ -1.78
PTP4A1Q93096 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.91□□□□□ -1.78
PTP4A1Q93096 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PTP4A1Q93096 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.91□□□□□ -1.78
PTP4A1Q93096 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PTP4A1Q93096 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PTP4A1Q93096 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
PTP4A1Q93096 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PTP4A1Q93096 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PTP4A1Q93096 RNU6-492P-201ENST00000363035 104 ntBASIC3.91□□□□□ -1.78
PTP4A1Q93096 RNU6-730P-201ENST00000383954 104 ntBASIC3.91□□□□□ -1.78
PTP4A1Q93096 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
PTP4A1Q93096 MCTS2P-201ENST00000394552 546 ntBASIC3.91□□□□□ -1.78
PTP4A1Q93096 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PTP4A1Q93096 AL024474.1-201ENST00000404655 591 ntBASIC3.91□□□□□ -1.78
PTP4A1Q93096 AL583834.1-201ENST00000406943 343 ntBASIC3.91□□□□□ -1.78
PTP4A1Q93096 JKAMPP1-201ENST00000413804 919 ntBASIC3.91□□□□□ -1.78
PTP4A1Q93096 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PTP4A1Q93096 AL590139.1-201ENST00000416267 400 ntBASIC3.91□□□□□ -1.78
PTP4A1Q93096 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.91□□□□□ -1.78
PTP4A1Q93096 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC3.91□□□□□ -1.78
PTP4A1Q93096 MTCO3P1-205ENST00000422088 832 ntBASIC3.91□□□□□ -1.78
PTP4A1Q93096 SDCBPP2-201ENST00000424643 885 ntBASIC3.91□□□□□ -1.78
PTP4A1Q93096 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.91□□□□□ -1.78
PTP4A1Q93096 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.91□□□□□ -1.78
PTP4A1Q93096 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC3.91□□□□□ -1.78
PTP4A1Q93096 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PTP4A1Q93096 MRPS18BP2-201ENST00000434310 759 ntBASIC3.91□□□□□ -1.78
PTP4A1Q93096 AL645931.1-201ENST00000439737 410 ntBASIC3.91□□□□□ -1.78
PTP4A1Q93096 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.91□□□□□ -1.78
PTP4A1Q93096 AL162151.2-201ENST00000448875 158 ntBASIC3.91□□□□□ -1.78
PTP4A1Q93096 ANP32BP2-201ENST00000454525 545 ntBASIC3.91□□□□□ -1.78
PTP4A1Q93096 RPS20P24-201ENST00000457473 361 ntBASIC3.91□□□□□ -1.78
PTP4A1Q93096 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC3.91□□□□□ -1.78
PTP4A1Q93096 MTCO3P35-201ENST00000485582 781 ntBASIC3.91□□□□□ -1.78
PTP4A1Q93096 RPL23AP55-201ENST00000498163 452 ntBASIC3.91□□□□□ -1.78
PTP4A1Q93096 AC084024.2-201ENST00000503480 791 ntBASIC3.91□□□□□ -1.78
PTP4A1Q93096 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
PTP4A1Q93096 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.91□□□□□ -1.78
PTP4A1Q93096 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.91□□□□□ -1.78
PTP4A1Q93096 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms