Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RNF220Q5VTB9 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.76□□□□□ -1.65
RNF220Q5VTB9 MTATP6P27-201ENST00000416987 621 ntBASIC4.76□□□□□ -1.65
RNF220Q5VTB9 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.76□□□□□ -1.65
RNF220Q5VTB9 LARP1BP3-201ENST00000437229 869 ntBASIC4.76□□□□□ -1.65
RNF220Q5VTB9 MUPP-201ENST00000438111 566 ntBASIC4.76□□□□□ -1.65
RNF220Q5VTB9 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.76□□□□□ -1.65
RNF220Q5VTB9 SPRYD7P1-201ENST00000443861 570 ntBASIC4.76□□□□□ -1.65
RNF220Q5VTB9 AC005297.2-201ENST00000450430 606 ntBASIC4.76□□□□□ -1.65
RNF220Q5VTB9 CEACAMP6-201ENST00000452007 574 ntBASIC4.76□□□□□ -1.65
RNF220Q5VTB9 SUMO2P2-201ENST00000456482 255 ntBASIC4.76□□□□□ -1.65
RNF220Q5VTB9 RN7SL517P-201ENST00000462240 305 ntBASIC4.76□□□□□ -1.65
RNF220Q5VTB9 AC091564.1-201ENST00000464563 479 ntBASIC4.76□□□□□ -1.65
RNF220Q5VTB9 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.76□□□□□ -1.65
RNF220Q5VTB9 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.76□□□□□ -1.65
RNF220Q5VTB9 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.76□□□□□ -1.65
RNF220Q5VTB9 POU5F1P7-201ENST00000508759 541 ntBASIC4.76□□□□□ -1.65
RNF220Q5VTB9 MTCO3P44-201ENST00000510977 541 ntBASIC4.76□□□□□ -1.65
RNF220Q5VTB9 AC024589.1-201ENST00000512207 263 ntBASIC4.76□□□□□ -1.65
RNF220Q5VTB9 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.76□□□□□ -1.65
RNF220Q5VTB9 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.76□□□□□ -1.65
RNF220Q5VTB9 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC4.76□□□□□ -1.65
RNF220Q5VTB9 COX6CP8-201ENST00000522620 226 ntBASIC4.76□□□□□ -1.65
RNF220Q5VTB9 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.76□□□□□ -1.65
RNF220Q5VTB9 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC4.76□□□□□ -1.65
RNF220Q5VTB9 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.76□□□□□ -1.65
RNF220Q5VTB9 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.76□□□□□ -1.65
RNF220Q5VTB9 RPL26P30-202ENST00000602923 645 ntBASIC4.76□□□□□ -1.65
RNF220Q5VTB9 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.76□□□□□ -1.65
RNF220Q5VTB9 AC090186.1-201ENST00000605991 572 ntBASIC4.76□□□□□ -1.65
RNF220Q5VTB9 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.76□□□□□ -1.65
RNF220Q5VTB9 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.76□□□□□ -1.65
RNF220Q5VTB9 AC015813.4-201ENST00000610469 179 ntBASIC4.76□□□□□ -1.65
RNF220Q5VTB9 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.76□□□□□ -1.65
RNF220Q5VTB9 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RNF220Q5VTB9 LINC00901.1-201ENST00000617252 152 ntBASIC4.76□□□□□ -1.65
RNF220Q5VTB9 AL445264.1-201ENST00000621719 171 ntBASIC4.76□□□□□ -1.65
RNF220Q5VTB9 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.76□□□□□ -1.65
RNF220Q5VTB9 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.76□□□□□ -1.65
RNF220Q5VTB9 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.76□□□□□ -1.65
RNF220Q5VTB9 CYP4F35P-202ENST00000636121 390 ntBASIC4.76□□□□□ -1.65
RNF220Q5VTB9 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
RNF220Q5VTB9 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RNF220Q5VTB9 Z73965.1-201ENST00000623412 2297 ntBASIC4.76□□□□□ -1.65
RNF220Q5VTB9 AC018529.3-201ENST00000624212 2254 ntBASIC4.76□□□□□ -1.65
RNF220Q5VTB9 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RNF220Q5VTB9 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RNF220Q5VTB9 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
RNF220Q5VTB9 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
RNF220Q5VTB9 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.76□□□□□ -1.65
RNF220Q5VTB9 AC107068.1-201ENST00000563286 4218 ntBASIC4.76□□□□□ -1.65
RNF220Q5VTB9 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RNF220Q5VTB9 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RNF220Q5VTB9 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
RNF220Q5VTB9 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RNF220Q5VTB9 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
RNF220Q5VTB9 AC139713.2-215ENST00000641428 5037 ntBASIC4.75□□□□□ -1.65
RNF220Q5VTB9 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
RNF220Q5VTB9 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
RNF220Q5VTB9 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RNF220Q5VTB9 Y_RNA.51-201ENST00000362725 102 ntBASIC4.75□□□□□ -1.65
RNF220Q5VTB9 RNU4-21P-201ENST00000362802 126 ntBASIC4.75□□□□□ -1.65
RNF220Q5VTB9 RN7SKP149-201ENST00000363008 344 ntBASIC4.75□□□□□ -1.65
RNF220Q5VTB9 RNU1-20P-201ENST00000363314 162 ntBASIC4.75□□□□□ -1.65
RNF220Q5VTB9 RNU6-289P-201ENST00000364093 107 ntBASIC4.75□□□□□ -1.65
RNF220Q5VTB9 Y_RNA.318-201ENST00000365131 97 ntBASIC4.75□□□□□ -1.65
RNF220Q5VTB9 MT-TC-201ENST00000387405 66 ntBASIC4.75□□□□□ -1.65
RNF220Q5VTB9 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
RNF220Q5VTB9 MIR1182-201ENST00000408363 97 ntBASIC4.75□□□□□ -1.65
RNF220Q5VTB9 BTF3L4P1-201ENST00000413813 468 ntBASIC4.75□□□□□ -1.65
RNF220Q5VTB9 AL592293.2-201ENST00000422292 996 ntBASIC4.75□□□□□ -1.65
RNF220Q5VTB9 EIF4EP1-201ENST00000422311 642 ntBASIC4.75□□□□□ -1.65
RNF220Q5VTB9 EI24P4-201ENST00000423683 1078 ntBASIC4.75□□□□□ -1.65
RNF220Q5VTB9 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.75□□□□□ -1.65
RNF220Q5VTB9 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RNF220Q5VTB9 PSMA6P3-201ENST00000428242 164 ntBASIC4.75□□□□□ -1.65
RNF220Q5VTB9 AL365184.2-201ENST00000431139 435 ntBASIC4.75□□□□□ -1.65
RNF220Q5VTB9 PRELID3BP10-201ENST00000431957 584 ntBASIC4.75□□□□□ -1.65
RNF220Q5VTB9 LYPLA1P1-201ENST00000434514 622 ntBASIC4.75□□□□□ -1.65
RNF220Q5VTB9 NMNAT1P2-201ENST00000435192 860 ntBASIC4.75□□□□□ -1.65
RNF220Q5VTB9 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC4.75□□□□□ -1.65
RNF220Q5VTB9 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.75□□□□□ -1.65
RNF220Q5VTB9 LSM1P1-201ENST00000438629 273 ntBASIC4.75□□□□□ -1.65
RNF220Q5VTB9 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.75□□□□□ -1.65
RNF220Q5VTB9 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.75□□□□□ -1.65
RNF220Q5VTB9 COX6CP2-201ENST00000444980 225 ntBASIC4.75□□□□□ -1.65
RNF220Q5VTB9 BMI1P1-201ENST00000445879 941 ntBASIC4.75□□□□□ -1.65
RNF220Q5VTB9 AL360221.1-201ENST00000445989 335 ntBASIC4.75□□□□□ -1.65
RNF220Q5VTB9 RPL29P29-201ENST00000448725 423 ntBASIC4.75□□□□□ -1.65
RNF220Q5VTB9 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.75□□□□□ -1.65
RNF220Q5VTB9 BX322784.1-201ENST00000455793 1077 ntBASIC4.75□□□□□ -1.65
RNF220Q5VTB9 AC090142.1-201ENST00000465776 462 ntBASIC4.75□□□□□ -1.65
RNF220Q5VTB9 AC106872.3-201ENST00000495104 446 ntBASIC4.75□□□□□ -1.65
RNF220Q5VTB9 RPS4XP18-201ENST00000495480 763 ntBASIC4.75□□□□□ -1.65
RNF220Q5VTB9 AL136038.1-201ENST00000497246 351 ntBASIC4.75□□□□□ -1.65
RNF220Q5VTB9 OR5H5P-201ENST00000503164 928 ntBASIC4.75□□□□□ -1.65
RNF220Q5VTB9 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.75□□□□□ -1.65
RNF220Q5VTB9 AC021678.1-201ENST00000505195 936 ntBASIC4.75□□□□□ -1.65
RNF220Q5VTB9 RPS4XP20-201ENST00000505751 772 ntBASIC4.75□□□□□ -1.65
RNF220Q5VTB9 GTF2F2P1-201ENST00000511083 675 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms