Protein–RNA interactions for Protein: Q13698

CACNA1S, Voltage-dependent L-type calcium channel subunit alpha-1S, humanhuman

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1SQ13698 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.02□□□□□ -1.77
CACNA1SQ13698 VN1R90P-201ENST00000595717 726 ntBASIC4.02□□□□□ -1.77
CACNA1SQ13698 AC006557.5-201ENST00000603126 811 ntBASIC4.02□□□□□ -1.77
CACNA1SQ13698 AC007998.5-201ENST00000622938 237 ntBASIC4.02□□□□□ -1.77
CACNA1SQ13698 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC4.02□□□□□ -1.77
CACNA1SQ13698 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CACNA1SQ13698 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.02□□□□□ -1.77
CACNA1SQ13698 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
CACNA1SQ13698 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
CACNA1SQ13698 TOPORSLP1-201ENST00000467693 2102 ntBASIC4.01□□□□□ -1.77
CACNA1SQ13698 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.01□□□□□ -1.77
CACNA1SQ13698 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.01□□□□□ -1.77
CACNA1SQ13698 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
CACNA1SQ13698 RNU4-47P-201ENST00000410876 114 ntBASIC4.01□□□□□ -1.77
CACNA1SQ13698 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.01□□□□□ -1.77
CACNA1SQ13698 OR6K4P-201ENST00000423179 955 ntBASIC4.01□□□□□ -1.77
CACNA1SQ13698 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC4.01□□□□□ -1.77
CACNA1SQ13698 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.01□□□□□ -1.77
CACNA1SQ13698 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.01□□□□□ -1.77
CACNA1SQ13698 PSMA2P1-201ENST00000526365 646 ntBASIC4.01□□□□□ -1.77
CACNA1SQ13698 AC005242.1-201ENST00000585658 438 ntBASIC4.01□□□□□ -1.77
CACNA1SQ13698 RDM1-219ENST00000615378 542 ntTSL 3 BASIC4.01□□□□□ -1.77
CACNA1SQ13698 LINC00901.1-201ENST00000617252 152 ntBASIC4.01□□□□□ -1.77
CACNA1SQ13698 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CACNA1SQ13698 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CACNA1SQ13698 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CACNA1SQ13698 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.01□□□□□ -1.77
CACNA1SQ13698 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
CACNA1SQ13698 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CACNA1SQ13698 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.01□□□□□ -1.77
CACNA1SQ13698 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC4.01□□□□□ -1.77
CACNA1SQ13698 AC006028.1-201ENST00000438379 402 ntBASIC4.01□□□□□ -1.77
CACNA1SQ13698 RPS27AP1-201ENST00000475545 471 ntBASIC4.01□□□□□ -1.77
CACNA1SQ13698 MIR4738-201ENST00000579134 87 ntBASIC4.01□□□□□ -1.77
CACNA1SQ13698 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4.01□□□□□ -1.77
CACNA1SQ13698 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.01□□□□□ -1.77
CACNA1SQ13698 AP002967.1-201ENST00000624203 539 ntBASIC4.01□□□□□ -1.77
CACNA1SQ13698 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.01□□□□□ -1.77
CACNA1SQ13698 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CACNA1SQ13698 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4□□□□□ -1.77
CACNA1SQ13698 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4□□□□□ -1.77
CACNA1SQ13698 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4□□□□□ -1.77
CACNA1SQ13698 AC093908.1-201ENST00000623125 8092 ntBASIC4□□□□□ -1.77
CACNA1SQ13698 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4□□□□□ -1.77
CACNA1SQ13698 SNORA7.4-201ENST00000384249 137 ntBASIC4□□□□□ -1.77
CACNA1SQ13698 AC073136.2-201ENST00000417282 849 ntBASIC4□□□□□ -1.77
CACNA1SQ13698 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4□□□□□ -1.77
CACNA1SQ13698 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4□□□□□ -1.77
CACNA1SQ13698 DNAJC19P1-201ENST00000455312 319 ntBASIC4□□□□□ -1.77
CACNA1SQ13698 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC4□□□□□ -1.77
CACNA1SQ13698 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC4□□□□□ -1.77
CACNA1SQ13698 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4□□□□□ -1.77
CACNA1SQ13698 LYZ-203ENST00000549690 669 ntTSL 2 BASIC4□□□□□ -1.77
CACNA1SQ13698 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC4□□□□□ -1.77
CACNA1SQ13698 AC087468.1-201ENST00000604365 630 ntBASIC4□□□□□ -1.77
CACNA1SQ13698 uc_338.25-201ENST00000613756 156 ntBASIC4□□□□□ -1.77
CACNA1SQ13698 AC016542.2-201ENST00000624201 619 ntBASIC4□□□□□ -1.77
CACNA1SQ13698 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
CACNA1SQ13698 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CACNA1SQ13698 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CACNA1SQ13698 OR5H2-201ENST00000355273 945 ntBASIC3.99□□□□□ -1.77
CACNA1SQ13698 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CACNA1SQ13698 MIR422A-201ENST00000362286 90 ntBASIC3.99□□□□□ -1.77
CACNA1SQ13698 RNA5SP126-201ENST00000365092 109 ntBASIC3.99□□□□□ -1.77
CACNA1SQ13698 RN7SKP284-201ENST00000411002 343 ntBASIC3.99□□□□□ -1.77
CACNA1SQ13698 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.99□□□□□ -1.77
CACNA1SQ13698 AC118465.1-201ENST00000513820 1271 ntBASIC3.99□□□□□ -1.77
CACNA1SQ13698 LDHBP3-201ENST00000514909 822 ntBASIC3.99□□□□□ -1.77
CACNA1SQ13698 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.99□□□□□ -1.77
CACNA1SQ13698 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC3.99□□□□□ -1.77
CACNA1SQ13698 MIR2682-201ENST00000580305 110 ntBASIC3.99□□□□□ -1.77
CACNA1SQ13698 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CACNA1SQ13698 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC3.99□□□□□ -1.77
CACNA1SQ13698 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.99□□□□□ -1.77
CACNA1SQ13698 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.99□□□□□ -1.77
CACNA1SQ13698 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
CACNA1SQ13698 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CACNA1SQ13698 AL672296.1-201ENST00000427780 2158 ntBASIC3.99□□□□□ -1.77
CACNA1SQ13698 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.99□□□□□ -1.77
CACNA1SQ13698 NR1H5P-201ENST00000452683 1377 ntBASIC3.99□□□□□ -1.77
CACNA1SQ13698 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.98□□□□□ -1.77
CACNA1SQ13698 AL356968.1-201ENST00000416622 474 ntBASIC3.98□□□□□ -1.77
CACNA1SQ13698 RPS24P13-201ENST00000442520 397 ntBASIC3.98□□□□□ -1.77
CACNA1SQ13698 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC3.98□□□□□ -1.77
CACNA1SQ13698 AF186190.1-201ENST00000517470 480 ntBASIC3.98□□□□□ -1.77
CACNA1SQ13698 AC087276.1-201ENST00000529659 480 ntBASIC3.98□□□□□ -1.77
CACNA1SQ13698 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.98□□□□□ -1.77
CACNA1SQ13698 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC3.98□□□□□ -1.77
CACNA1SQ13698 AC122134.1-201ENST00000565664 1104 ntBASIC3.98□□□□□ -1.77
CACNA1SQ13698 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.98□□□□□ -1.77
CACNA1SQ13698 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CACNA1SQ13698 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CACNA1SQ13698 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CACNA1SQ13698 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.98□□□□□ -1.77
CACNA1SQ13698 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.98□□□□□ -1.77
CACNA1SQ13698 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
CACNA1SQ13698 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.98□□□□□ -1.77
CACNA1SQ13698 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CACNA1SQ13698 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CACNA1SQ13698 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms