Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
NKX6-1P78426 RNU6-720P-201ENST00000516363 108 ntBASIC4.71□□□□□ -1.66
NKX6-1P78426 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC4.71□□□□□ -1.66
NKX6-1P78426 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.71□□□□□ -1.66
NKX6-1P78426 AC068446.3-201ENST00000555285 382 ntBASIC4.71□□□□□ -1.66
NKX6-1P78426 MIR4480-201ENST00000582492 71 ntBASIC4.71□□□□□ -1.66
NKX6-1P78426 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.71□□□□□ -1.66
NKX6-1P78426 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.71□□□□□ -1.66
NKX6-1P78426 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.71□□□□□ -1.66
NKX6-1P78426 TPMTP1-201ENST00000592307 737 ntBASIC4.71□□□□□ -1.66
NKX6-1P78426 BNIP3P8-201ENST00000597863 560 ntBASIC4.71□□□□□ -1.66
NKX6-1P78426 AC009237.13-201ENST00000603193 276 ntBASIC4.71□□□□□ -1.66
NKX6-1P78426 YWHAQP7-201ENST00000603536 658 ntBASIC4.71□□□□□ -1.66
NKX6-1P78426 AC091805.2-201ENST00000603848 235 ntBASIC4.71□□□□□ -1.66
NKX6-1P78426 AC025588.3-201ENST00000604182 274 ntBASIC4.71□□□□□ -1.66
NKX6-1P78426 NDUFA8P1-201ENST00000605525 367 ntBASIC4.71□□□□□ -1.66
NKX6-1P78426 COX6CP4-201ENST00000605798 228 ntBASIC4.71□□□□□ -1.66
NKX6-1P78426 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.71□□□□□ -1.66
NKX6-1P78426 AC092354.2-201ENST00000607786 514 ntBASIC4.71□□□□□ -1.66
NKX6-1P78426 Z99129.1-201ENST00000612510 255 ntBASIC4.71□□□□□ -1.66
NKX6-1P78426 AC006338.2-201ENST00000616864 791 ntBASIC4.71□□□□□ -1.66
NKX6-1P78426 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.71□□□□□ -1.66
NKX6-1P78426 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
NKX6-1P78426 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
NKX6-1P78426 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.71□□□□□ -1.66
NKX6-1P78426 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NKX6-1P78426 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
NKX6-1P78426 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NKX6-1P78426 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.7□□□□□ -1.66
NKX6-1P78426 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
NKX6-1P78426 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
NKX6-1P78426 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
NKX6-1P78426 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC4.7□□□□□ -1.66
NKX6-1P78426 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NKX6-1P78426 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
NKX6-1P78426 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.7□□□□□ -1.66
NKX6-1P78426 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
NKX6-1P78426 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
NKX6-1P78426 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.7□□□□□ -1.66
NKX6-1P78426 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.7□□□□□ -1.66
NKX6-1P78426 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.7□□□□□ -1.66
NKX6-1P78426 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.7□□□□□ -1.66
NKX6-1P78426 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
NKX6-1P78426 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.7□□□□□ -1.66
NKX6-1P78426 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
NKX6-1P78426 OR9G4-201ENST00000302957 984 ntBASIC4.7□□□□□ -1.66
NKX6-1P78426 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NKX6-1P78426 AL161781.1-201ENST00000354277 403 ntBASIC4.7□□□□□ -1.66
NKX6-1P78426 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
NKX6-1P78426 MIR133B-201ENST00000362210 119 ntBASIC4.7□□□□□ -1.66
NKX6-1P78426 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NKX6-1P78426 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.7□□□□□ -1.66
NKX6-1P78426 SNORA16A-201ENST00000384342 137 ntBASIC4.7□□□□□ -1.66
NKX6-1P78426 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.7□□□□□ -1.66
NKX6-1P78426 HMGN1P14-201ENST00000412459 517 ntBASIC4.7□□□□□ -1.66
NKX6-1P78426 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.7□□□□□ -1.66
NKX6-1P78426 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.7□□□□□ -1.66
NKX6-1P78426 AL807761.1-201ENST00000417622 171 ntBASIC4.7□□□□□ -1.66
NKX6-1P78426 USP9YP13-201ENST00000417797 480 ntBASIC4.7□□□□□ -1.66
NKX6-1P78426 RAD23BP1-201ENST00000421404 1227 ntBASIC4.7□□□□□ -1.66
NKX6-1P78426 SRSF1P1-201ENST00000424058 520 ntBASIC4.7□□□□□ -1.66
NKX6-1P78426 MTCO3P30-201ENST00000426425 670 ntBASIC4.7□□□□□ -1.66
NKX6-1P78426 AL356583.2-201ENST00000426536 280 ntBASIC4.7□□□□□ -1.66
NKX6-1P78426 RPL12P17-201ENST00000432393 498 ntBASIC4.7□□□□□ -1.66
NKX6-1P78426 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.7□□□□□ -1.66
NKX6-1P78426 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC4.7□□□□□ -1.66
NKX6-1P78426 AC004980.3-201ENST00000447046 365 ntBASIC4.7□□□□□ -1.66
NKX6-1P78426 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC4.7□□□□□ -1.66
NKX6-1P78426 IFNWP4-201ENST00000453148 294 ntBASIC4.7□□□□□ -1.66
NKX6-1P78426 AL033528.1-201ENST00000453780 140 ntBASIC4.7□□□□□ -1.66
NKX6-1P78426 snoU109.1-201ENST00000459339 135 ntBASIC4.7□□□□□ -1.66
NKX6-1P78426 RPS29P22-201ENST00000472363 168 ntBASIC4.7□□□□□ -1.66
NKX6-1P78426 RPL7P16-201ENST00000479738 738 ntBASIC4.7□□□□□ -1.66
NKX6-1P78426 RPL5P22-201ENST00000480199 884 ntBASIC4.7□□□□□ -1.66
NKX6-1P78426 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.7□□□□□ -1.66
NKX6-1P78426 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.7□□□□□ -1.66
NKX6-1P78426 OR51K1P-201ENST00000510214 950 ntBASIC4.7□□□□□ -1.66
NKX6-1P78426 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.7□□□□□ -1.66
NKX6-1P78426 PAICSP4-201ENST00000517543 1253 ntBASIC4.7□□□□□ -1.66
NKX6-1P78426 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.7□□□□□ -1.66
NKX6-1P78426 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.7□□□□□ -1.66
NKX6-1P78426 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.7□□□□□ -1.66
NKX6-1P78426 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.7□□□□□ -1.66
NKX6-1P78426 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.7□□□□□ -1.66
NKX6-1P78426 AC245505.1-201ENST00000556398 224 ntBASIC4.7□□□□□ -1.66
NKX6-1P78426 AC007599.1-201ENST00000568688 1174 ntBASIC4.7□□□□□ -1.66
NKX6-1P78426 MTND1P15-201ENST00000579262 949 ntBASIC4.7□□□□□ -1.66
NKX6-1P78426 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
NKX6-1P78426 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
NKX6-1P78426 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.7□□□□□ -1.66
NKX6-1P78426 OR4G1P-201ENST00000588632 938 ntBASIC4.7□□□□□ -1.66
NKX6-1P78426 AC067852.4-201ENST00000590314 478 ntBASIC4.7□□□□□ -1.66
NKX6-1P78426 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC4.7□□□□□ -1.66
NKX6-1P78426 AC073648.5-201ENST00000603502 305 ntBASIC4.7□□□□□ -1.66
NKX6-1P78426 AC087241.4-201ENST00000612441 480 ntBASIC4.7□□□□□ -1.66
NKX6-1P78426 MIR6133-201ENST00000617057 108 ntBASIC4.7□□□□□ -1.66
NKX6-1P78426 AL731566.2-201ENST00000618971 317 ntBASIC4.7□□□□□ -1.66
NKX6-1P78426 AC018755.4-201ENST00000619715 454 ntBASIC4.7□□□□□ -1.66
NKX6-1P78426 CRYM-AS1-204ENST00000637983 556 ntBASIC4.7□□□□□ -1.66
NKX6-1P78426 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms