Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC4.51□□□□□ -1.69
CLCN3P51790 OFD1P7Y-201ENST00000454643 1155 ntBASIC4.51□□□□□ -1.69
CLCN3P51790 AC092155.2-201ENST00000454675 477 ntBASIC4.51□□□□□ -1.69
CLCN3P51790 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.51□□□□□ -1.69
CLCN3P51790 AC110792.1-201ENST00000491826 472 ntBASIC4.51□□□□□ -1.69
CLCN3P51790 AC021146.3-201ENST00000511911 260 ntBASIC4.51□□□□□ -1.69
CLCN3P51790 MTND4LP31-201ENST00000514859 294 ntBASIC4.51□□□□□ -1.69
CLCN3P51790 AC023632.1-201ENST00000518463 375 ntBASIC4.51□□□□□ -1.69
CLCN3P51790 IGLV3-26-201ENST00000520756 302 ntBASIC4.51□□□□□ -1.69
CLCN3P51790 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.51□□□□□ -1.69
CLCN3P51790 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.51□□□□□ -1.69
CLCN3P51790 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.51□□□□□ -1.69
CLCN3P51790 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC4.51□□□□□ -1.69
CLCN3P51790 RPL23AP87-202ENST00000573039 466 ntBASIC4.51□□□□□ -1.69
CLCN3P51790 AC006130.2-201ENST00000586202 326 ntBASIC4.51□□□□□ -1.69
CLCN3P51790 NF1P5-201ENST00000588287 448 ntBASIC4.51□□□□□ -1.69
CLCN3P51790 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CLCN3P51790 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.51□□□□□ -1.69
CLCN3P51790 AL606490.9-201ENST00000603331 271 ntBASIC4.51□□□□□ -1.69
CLCN3P51790 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.51□□□□□ -1.69
CLCN3P51790 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.51□□□□□ -1.69
CLCN3P51790 AC009237.15-201ENST00000610252 501 ntBASIC4.51□□□□□ -1.69
CLCN3P51790 MIR6868-201ENST00000611215 58 ntBASIC4.51□□□□□ -1.69
CLCN3P51790 AC064801.1-201ENST00000612025 407 ntBASIC4.51□□□□□ -1.69
CLCN3P51790 AC090246.1-201ENST00000616499 426 ntBASIC4.51□□□□□ -1.69
CLCN3P51790 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CLCN3P51790 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.51□□□□□ -1.69
CLCN3P51790 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CLCN3P51790 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CLCN3P51790 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.51□□□□□ -1.69
CLCN3P51790 Z95327.2-201ENST00000414579 1873 ntBASIC4.51□□□□□ -1.69
CLCN3P51790 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CLCN3P51790 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CLCN3P51790 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CLCN3P51790 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CLCN3P51790 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLCN3P51790 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.5□□□□□ -1.69
CLCN3P51790 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLCN3P51790 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLCN3P51790 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.5□□□□□ -1.69
CLCN3P51790 RNU4-28P-201ENST00000364739 141 ntBASIC4.5□□□□□ -1.69
CLCN3P51790 RNU6-1151P-201ENST00000384684 107 ntBASIC4.5□□□□□ -1.69
CLCN3P51790 RNU6-575P-201ENST00000411326 105 ntBASIC4.5□□□□□ -1.69
CLCN3P51790 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC4.5□□□□□ -1.69
CLCN3P51790 RPS3AP37-201ENST00000419176 745 ntBASIC4.5□□□□□ -1.69
CLCN3P51790 AL590609.2-201ENST00000421430 368 ntBASIC4.5□□□□□ -1.69
CLCN3P51790 AL031736.2-201ENST00000426573 787 ntBASIC4.5□□□□□ -1.69
CLCN3P51790 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.5□□□□□ -1.69
CLCN3P51790 RPL12P46-201ENST00000436610 195 ntBASIC4.5□□□□□ -1.69
CLCN3P51790 ARL4AP3-201ENST00000441452 574 ntBASIC4.5□□□□□ -1.69
CLCN3P51790 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CLCN3P51790 AL591623.2-201ENST00000449978 222 ntBASIC4.5□□□□□ -1.69
CLCN3P51790 MRPL42P4-201ENST00000453267 443 ntBASIC4.5□□□□□ -1.69
CLCN3P51790 RPL36AP13-201ENST00000457490 317 ntBASIC4.5□□□□□ -1.69
CLCN3P51790 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.5□□□□□ -1.69
CLCN3P51790 RPL21P71-201ENST00000465598 459 ntBASIC4.5□□□□□ -1.69
CLCN3P51790 RPL23AP44-201ENST00000482216 473 ntBASIC4.5□□□□□ -1.69
CLCN3P51790 MTCO3P35-201ENST00000485582 781 ntBASIC4.5□□□□□ -1.69
CLCN3P51790 RPS4XP15-201ENST00000489210 795 ntBASIC4.5□□□□□ -1.69
CLCN3P51790 RPL29P14-201ENST00000495837 428 ntBASIC4.5□□□□□ -1.69
CLCN3P51790 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC4.5□□□□□ -1.69
CLCN3P51790 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CLCN3P51790 AC020593.1-201ENST00000507399 299 ntBASIC4.5□□□□□ -1.69
CLCN3P51790 AC005351.1-201ENST00000511152 786 ntBASIC4.5□□□□□ -1.69
CLCN3P51790 RNU6-311P-201ENST00000516224 102 ntBASIC4.5□□□□□ -1.69
CLCN3P51790 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.5□□□□□ -1.69
CLCN3P51790 HIGD1AP6-201ENST00000521833 279 ntBASIC4.5□□□□□ -1.69
CLCN3P51790 IFITM8P-201ENST00000522529 394 ntBASIC4.5□□□□□ -1.69
CLCN3P51790 OR4A2P-201ENST00000527276 913 ntBASIC4.5□□□□□ -1.69
CLCN3P51790 MED28P5-201ENST00000528254 438 ntBASIC4.5□□□□□ -1.69
CLCN3P51790 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC4.5□□□□□ -1.69
CLCN3P51790 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.5□□□□□ -1.69
CLCN3P51790 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.5□□□□□ -1.69
CLCN3P51790 AC044913.1-201ENST00000557200 430 ntBASIC4.5□□□□□ -1.69
CLCN3P51790 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.5□□□□□ -1.69
CLCN3P51790 AC120057.2-201ENST00000571520 271 ntBASIC4.5□□□□□ -1.69
CLCN3P51790 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.5□□□□□ -1.69
CLCN3P51790 AC025627.2-201ENST00000576220 160 ntBASIC4.5□□□□□ -1.69
CLCN3P51790 AC091488.1-201ENST00000604239 660 ntBASIC4.5□□□□□ -1.69
CLCN3P51790 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
CLCN3P51790 AC006386.1-201ENST00000619436 415 ntBASIC4.5□□□□□ -1.69
CLCN3P51790 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CLCN3P51790 MFSD8-245ENST00000641743 948 ntBASIC4.5□□□□□ -1.69
CLCN3P51790 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CLCN3P51790 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLCN3P51790 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLCN3P51790 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLCN3P51790 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CLCN3P51790 AC000367.1-201ENST00000452711 1766 ntBASIC4.5□□□□□ -1.69
CLCN3P51790 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLCN3P51790 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLCN3P51790 NOL8P1-201ENST00000508336 3529 ntBASIC4.5□□□□□ -1.69
CLCN3P51790 AL122126.1-201ENST00000546905 1318 ntBASIC4.49□□□□□ -1.69
CLCN3P51790 SCN1A-220ENST00000641603 12506 ntBASIC4.49□□□□□ -1.69
CLCN3P51790 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CLCN3P51790 AC093535.2-201ENST00000624769 2326 ntBASIC4.49□□□□□ -1.69
CLCN3P51790 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CLCN3P51790 SNORD35B-201ENST00000363660 87 ntBASIC4.49□□□□□ -1.69
CLCN3P51790 RNU4-68P-201ENST00000364314 141 ntBASIC4.49□□□□□ -1.69
CLCN3P51790 SNORD116-12-201ENST00000384468 92 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms