Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.98□□□□□ -1.77
SCN4AP35499 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
SCN4AP35499 AC007390.2-201ENST00000606229 3803 ntBASIC3.97□□□□□ -1.77
SCN4AP35499 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.97□□□□□ -1.77
SCN4AP35499 AC012078.1-201ENST00000405035 1646 ntBASIC3.97□□□□□ -1.77
SCN4AP35499 SNORA7.4-201ENST00000384249 137 ntBASIC3.97□□□□□ -1.77
SCN4AP35499 RNA5SP184-201ENST00000411071 108 ntBASIC3.97□□□□□ -1.77
SCN4AP35499 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SCN4AP35499 AC002553.2-201ENST00000453217 340 ntBASIC3.97□□□□□ -1.77
SCN4AP35499 RN7SL93P-201ENST00000463035 293 ntBASIC3.97□□□□□ -1.77
SCN4AP35499 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.97□□□□□ -1.77
SCN4AP35499 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.97□□□□□ -1.77
SCN4AP35499 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.97□□□□□ -1.77
SCN4AP35499 MIR2114-201ENST00000516645 80 ntBASIC3.97□□□□□ -1.77
SCN4AP35499 COX6B1P6-201ENST00000522347 255 ntBASIC3.97□□□□□ -1.77
SCN4AP35499 OR4R3P-201ENST00000525084 838 ntBASIC3.97□□□□□ -1.77
SCN4AP35499 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.97□□□□□ -1.77
SCN4AP35499 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.97□□□□□ -1.77
SCN4AP35499 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.97□□□□□ -1.77
SCN4AP35499 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.97□□□□□ -1.77
SCN4AP35499 AC104763.2-201ENST00000604179 382 ntBASIC3.97□□□□□ -1.77
SCN4AP35499 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC3.97□□□□□ -1.77
SCN4AP35499 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
SCN4AP35499 THAP12P8-201ENST00000447914 2115 ntBASIC3.97□□□□□ -1.77
SCN4AP35499 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.97□□□□□ -1.77
SCN4AP35499 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
SCN4AP35499 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SCN4AP35499 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SCN4AP35499 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SCN4AP35499 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.96□□□□□ -1.78
SCN4AP35499 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.96□□□□□ -1.78
SCN4AP35499 RPL21P109-201ENST00000422213 475 ntBASIC3.96□□□□□ -1.78
SCN4AP35499 ATP5C1P1-201ENST00000441945 895 ntBASIC3.96□□□□□ -1.78
SCN4AP35499 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.96□□□□□ -1.78
SCN4AP35499 HMGB1P5-202ENST00000451497 985 ntBASIC3.96□□□□□ -1.78
SCN4AP35499 AC106872.2-201ENST00000494303 480 ntBASIC3.96□□□□□ -1.78
SCN4AP35499 AC010374.2-201ENST00000512933 535 ntBASIC3.96□□□□□ -1.78
SCN4AP35499 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.96□□□□□ -1.78
SCN4AP35499 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.96□□□□□ -1.78
SCN4AP35499 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.96□□□□□ -1.78
SCN4AP35499 AP003485.2-201ENST00000623636 610 ntBASIC3.96□□□□□ -1.78
SCN4AP35499 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SCN4AP35499 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SCN4AP35499 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SCN4AP35499 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SCN4AP35499 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SCN4AP35499 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.95□□□□□ -1.78
SCN4AP35499 AC111000.5-201ENST00000506559 1178 ntBASIC3.95□□□□□ -1.78
SCN4AP35499 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.95□□□□□ -1.78
SCN4AP35499 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.95□□□□□ -1.78
SCN4AP35499 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.95□□□□□ -1.78
SCN4AP35499 AL157817.1-201ENST00000614264 790 ntBASIC3.95□□□□□ -1.78
SCN4AP35499 AC022149.2-201ENST00000621061 203 ntBASIC3.95□□□□□ -1.78
SCN4AP35499 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.95□□□□□ -1.78
SCN4AP35499 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SCN4AP35499 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SCN4AP35499 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SCN4AP35499 AL359693.1-201ENST00000614959 2407 ntBASIC3.95□□□□□ -1.78
SCN4AP35499 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
SCN4AP35499 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
SCN4AP35499 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
SCN4AP35499 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
SCN4AP35499 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
SCN4AP35499 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.95□□□□□ -1.78
SCN4AP35499 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SCN4AP35499 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
SCN4AP35499 MIR1183-201ENST00000408856 89 ntBASIC3.95□□□□□ -1.78
SCN4AP35499 NUP35P1-201ENST00000422734 947 ntBASIC3.95□□□□□ -1.78
SCN4AP35499 NAP1L4P3-201ENST00000432820 1147 ntBASIC3.95□□□□□ -1.78
SCN4AP35499 MRPS18BP2-201ENST00000434310 759 ntBASIC3.95□□□□□ -1.78
SCN4AP35499 AL450263.2-201ENST00000439400 589 ntBASIC3.95□□□□□ -1.78
SCN4AP35499 AC084357.1-201ENST00000473404 255 ntBASIC3.95□□□□□ -1.78
SCN4AP35499 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.95□□□□□ -1.78
SCN4AP35499 AL137790.1-201ENST00000634283 177 ntBASIC3.95□□□□□ -1.78
SCN4AP35499 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SCN4AP35499 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SCN4AP35499 AL645568.2-201ENST00000432815 1337 ntBASIC3.95□□□□□ -1.78
SCN4AP35499 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SCN4AP35499 RNA5SP229-201ENST00000410809 99 ntBASIC3.94□□□□□ -1.78
SCN4AP35499 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.94□□□□□ -1.78
SCN4AP35499 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.94□□□□□ -1.78
SCN4AP35499 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.94□□□□□ -1.78
SCN4AP35499 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.94□□□□□ -1.78
SCN4AP35499 AL157394.1-201ENST00000562983 1224 ntBASIC3.94□□□□□ -1.78
SCN4AP35499 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.94□□□□□ -1.78
SCN4AP35499 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.94□□□□□ -1.78
SCN4AP35499 NCAPGP1-201ENST00000505112 1814 ntBASIC3.94□□□□□ -1.78
SCN4AP35499 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.94□□□□□ -1.78
SCN4AP35499 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.94□□□□□ -1.78
SCN4AP35499 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SCN4AP35499 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
SCN4AP35499 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.94□□□□□ -1.78
SCN4AP35499 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SCN4AP35499 RNU1-70P-201ENST00000362618 164 ntBASIC3.93□□□□□ -1.78
SCN4AP35499 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.93□□□□□ -1.78
SCN4AP35499 Z99755.1-201ENST00000414048 380 ntBASIC3.93□□□□□ -1.78
SCN4AP35499 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.93□□□□□ -1.78
SCN4AP35499 AC244033.1-201ENST00000426826 870 ntBASIC3.93□□□□□ -1.78
SCN4AP35499 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.93□□□□□ -1.78
SCN4AP35499 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms