Protein–RNA interactions for Protein: P28358

HOXD10, Homeobox protein Hox-D10, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD10P28358 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
HOXD10P28358 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.28□□□□□ -1.72
HOXD10P28358 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.28□□□□□ -1.72
HOXD10P28358 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.28□□□□□ -1.72
HOXD10P28358 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.28□□□□□ -1.72
HOXD10P28358 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.28□□□□□ -1.72
HOXD10P28358 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.28□□□□□ -1.72
HOXD10P28358 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.28□□□□□ -1.72
HOXD10P28358 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.28□□□□□ -1.72
HOXD10P28358 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.28□□□□□ -1.72
HOXD10P28358 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.28□□□□□ -1.72
HOXD10P28358 AC073111.2-201ENST00000605657 1075 ntBASIC4.28□□□□□ -1.72
HOXD10P28358 AL031666.3-201ENST00000609320 1006 ntBASIC4.28□□□□□ -1.72
HOXD10P28358 AC135507.2-201ENST00000612443 309 ntBASIC4.28□□□□□ -1.72
HOXD10P28358 AL591424.2-201ENST00000617023 128 ntBASIC4.28□□□□□ -1.72
HOXD10P28358 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC4.28□□□□□ -1.72
HOXD10P28358 MIR8057-201ENST00000620957 69 ntBASIC4.28□□□□□ -1.72
HOXD10P28358 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC4.28□□□□□ -1.72
HOXD10P28358 AC119674.1-207ENST00000641355 633 ntBASIC4.28□□□□□ -1.72
HOXD10P28358 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.28□□□□□ -1.72
HOXD10P28358 AC119744.1-201ENST00000454746 1715 ntBASIC4.28□□□□□ -1.72
HOXD10P28358 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.27□□□□□ -1.73
HOXD10P28358 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.27□□□□□ -1.73
HOXD10P28358 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
HOXD10P28358 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.27□□□□□ -1.73
HOXD10P28358 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HOXD10P28358 RNU1-33P-201ENST00000364249 162 ntBASIC4.27□□□□□ -1.73
HOXD10P28358 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
HOXD10P28358 AL512504.1-201ENST00000415494 778 ntBASIC4.27□□□□□ -1.73
HOXD10P28358 MTCO1P57-201ENST00000432182 261 ntBASIC4.27□□□□□ -1.73
HOXD10P28358 AC005019.1-201ENST00000436455 431 ntBASIC4.27□□□□□ -1.73
HOXD10P28358 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.27□□□□□ -1.73
HOXD10P28358 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
HOXD10P28358 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.27□□□□□ -1.73
HOXD10P28358 FTH1P25-201ENST00000447665 469 ntBASIC4.27□□□□□ -1.73
HOXD10P28358 AC115115.1-201ENST00000449927 248 ntBASIC4.27□□□□□ -1.73
HOXD10P28358 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.27□□□□□ -1.73
HOXD10P28358 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HOXD10P28358 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.27□□□□□ -1.73
HOXD10P28358 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.27□□□□□ -1.73
HOXD10P28358 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC4.27□□□□□ -1.73
HOXD10P28358 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.27□□□□□ -1.73
HOXD10P28358 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HOXD10P28358 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.27□□□□□ -1.73
HOXD10P28358 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.27□□□□□ -1.73
HOXD10P28358 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC4.27□□□□□ -1.73
HOXD10P28358 AP003117.2-201ENST00000606010 545 ntBASIC4.27□□□□□ -1.73
HOXD10P28358 AC009032.1-201ENST00000617574 431 ntBASIC4.27□□□□□ -1.73
HOXD10P28358 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.27□□□□□ -1.73
HOXD10P28358 AC104820.1-201ENST00000624183 307 ntBASIC4.27□□□□□ -1.73
HOXD10P28358 AC024023.1-201ENST00000624530 922 ntBASIC4.27□□□□□ -1.73
HOXD10P28358 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.27□□□□□ -1.73
HOXD10P28358 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.27□□□□□ -1.73
HOXD10P28358 MTND4P10-201ENST00000446199 1363 ntBASIC4.27□□□□□ -1.73
HOXD10P28358 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.27□□□□□ -1.73
HOXD10P28358 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HOXD10P28358 AC090337.1-201ENST00000579651 2074 ntBASIC4.26□□□□□ -1.73
HOXD10P28358 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
HOXD10P28358 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.26□□□□□ -1.73
HOXD10P28358 AC105074.1-201ENST00000623380 3095 ntBASIC4.26□□□□□ -1.73
HOXD10P28358 AL133383.2-201ENST00000622958 2336 ntBASIC4.26□□□□□ -1.73
HOXD10P28358 RNU6-666P-201ENST00000363499 107 ntBASIC4.26□□□□□ -1.73
HOXD10P28358 MIR421-201ENST00000365696 85 ntBASIC4.26□□□□□ -1.73
HOXD10P28358 U3.26-201ENST00000391236 204 ntBASIC4.26□□□□□ -1.73
HOXD10P28358 RPL7P60-201ENST00000397636 735 ntBASIC4.26□□□□□ -1.73
HOXD10P28358 RNU2-37P-201ENST00000410695 177 ntBASIC4.26□□□□□ -1.73
HOXD10P28358 RNA5SP498-201ENST00000411342 120 ntBASIC4.26□□□□□ -1.73
HOXD10P28358 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.26□□□□□ -1.73
HOXD10P28358 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.26□□□□□ -1.73
HOXD10P28358 MRPS33P4-201ENST00000434892 317 ntBASIC4.26□□□□□ -1.73
HOXD10P28358 ARL5AP3-201ENST00000439327 386 ntBASIC4.26□□□□□ -1.73
HOXD10P28358 RPS4XP10-201ENST00000465034 731 ntBASIC4.26□□□□□ -1.73
HOXD10P28358 AL049830.2-201ENST00000480072 201 ntBASIC4.26□□□□□ -1.73
HOXD10P28358 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.26□□□□□ -1.73
HOXD10P28358 NIPA2P2-201ENST00000496376 1083 ntBASIC4.26□□□□□ -1.73
HOXD10P28358 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.26□□□□□ -1.73
HOXD10P28358 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.26□□□□□ -1.73
HOXD10P28358 RNU6-491P-201ENST00000516099 110 ntBASIC4.26□□□□□ -1.73
HOXD10P28358 AC008694.2-201ENST00000517591 306 ntBASIC4.26□□□□□ -1.73
HOXD10P28358 RANP9-201ENST00000519957 271 ntBASIC4.26□□□□□ -1.73
HOXD10P28358 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.26□□□□□ -1.73
HOXD10P28358 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HOXD10P28358 AC027807.1-201ENST00000559921 996 ntBASIC4.26□□□□□ -1.73
HOXD10P28358 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.26□□□□□ -1.73
HOXD10P28358 MIR5186-201ENST00000577504 120 ntBASIC4.26□□□□□ -1.73
HOXD10P28358 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.26□□□□□ -1.73
HOXD10P28358 AC006116.10-201ENST00000591836 581 ntBASIC4.26□□□□□ -1.73
HOXD10P28358 BMS1P7-201ENST00000602440 1052 ntBASIC4.26□□□□□ -1.73
HOXD10P28358 RNA5SP108-201ENST00000605921 117 ntBASIC4.26□□□□□ -1.73
HOXD10P28358 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.26□□□□□ -1.73
HOXD10P28358 AC105429.2-201ENST00000610567 517 ntBASIC4.26□□□□□ -1.73
HOXD10P28358 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.26□□□□□ -1.73
HOXD10P28358 AL669942.2-201ENST00000620352 697 ntBASIC4.26□□□□□ -1.73
HOXD10P28358 AC119674.1-220ENST00000641502 1048 ntBASIC4.26□□□□□ -1.73
HOXD10P28358 AC097504.1-201ENST00000515103 2415 ntBASIC4.26□□□□□ -1.73
HOXD10P28358 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
HOXD10P28358 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HOXD10P28358 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HOXD10P28358 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.26□□□□□ -1.73
HOXD10P28358 HSPA8P1-201ENST00000425843 1833 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms