Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AC104454.1-201ENST00000421341 1401 ntBASIC4.32□□□□□ -1.72
ABCD3P28288 MAPK10-286ENST00000641208 8747 ntBASIC4.32□□□□□ -1.72
ABCD3P28288 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
ABCD3P28288 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ABCD3P28288 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ABCD3P28288 RNU1-94P-201ENST00000362627 173 ntBASIC4.32□□□□□ -1.72
ABCD3P28288 RNVU1-6-201ENST00000364688 164 ntBASIC4.32□□□□□ -1.72
ABCD3P28288 SNORD82-201ENST00000365530 70 ntBASIC4.32□□□□□ -1.72
ABCD3P28288 MIR585-201ENST00000384887 94 ntBASIC4.32□□□□□ -1.72
ABCD3P28288 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.32□□□□□ -1.72
ABCD3P28288 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.32□□□□□ -1.72
ABCD3P28288 AC005005.2-201ENST00000420779 380 ntBASIC4.32□□□□□ -1.72
ABCD3P28288 AL049610.1-201ENST00000423374 372 ntBASIC4.32□□□□□ -1.72
ABCD3P28288 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.32□□□□□ -1.72
ABCD3P28288 ELOCP18-201ENST00000434209 337 ntBASIC4.32□□□□□ -1.72
ABCD3P28288 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
ABCD3P28288 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.32□□□□□ -1.72
ABCD3P28288 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC4.32□□□□□ -1.72
ABCD3P28288 NDUFS5P3-201ENST00000450668 321 ntBASIC4.32□□□□□ -1.72
ABCD3P28288 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.32□□□□□ -1.72
ABCD3P28288 MTCO3P11-201ENST00000455103 774 ntBASIC4.32□□□□□ -1.72
ABCD3P28288 RPL7P22-201ENST00000466005 733 ntBASIC4.32□□□□□ -1.72
ABCD3P28288 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.32□□□□□ -1.72
ABCD3P28288 AC108078.3-201ENST00000502633 489 ntBASIC4.32□□□□□ -1.72
ABCD3P28288 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.32□□□□□ -1.72
ABCD3P28288 MTCO3P44-201ENST00000510977 541 ntBASIC4.32□□□□□ -1.72
ABCD3P28288 RNY4P37-201ENST00000516225 96 ntBASIC4.32□□□□□ -1.72
ABCD3P28288 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.32□□□□□ -1.72
ABCD3P28288 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.32□□□□□ -1.72
ABCD3P28288 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC4.32□□□□□ -1.72
ABCD3P28288 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.32□□□□□ -1.72
ABCD3P28288 AP003461.1-201ENST00000528866 78 ntBASIC4.32□□□□□ -1.72
ABCD3P28288 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.32□□□□□ -1.72
ABCD3P28288 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC4.32□□□□□ -1.72
ABCD3P28288 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
ABCD3P28288 AC009094.1-201ENST00000564443 426 ntBASIC4.32□□□□□ -1.72
ABCD3P28288 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.32□□□□□ -1.72
ABCD3P28288 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.32□□□□□ -1.72
ABCD3P28288 AC083899.3-201ENST00000603413 594 ntBASIC4.32□□□□□ -1.72
ABCD3P28288 AC112230.1-201ENST00000604342 547 ntBASIC4.32□□□□□ -1.72
ABCD3P28288 AC112220.3-201ENST00000605502 502 ntBASIC4.32□□□□□ -1.72
ABCD3P28288 AC080013.4-201ENST00000607624 649 ntBASIC4.32□□□□□ -1.72
ABCD3P28288 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.32□□□□□ -1.72
ABCD3P28288 AC007490.1-201ENST00000624321 703 ntBASIC4.32□□□□□ -1.72
ABCD3P28288 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
ABCD3P28288 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.32□□□□□ -1.72
ABCD3P28288 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ABCD3P28288 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.31□□□□□ -1.72
ABCD3P28288 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ABCD3P28288 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.31□□□□□ -1.72
ABCD3P28288 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.31□□□□□ -1.72
ABCD3P28288 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
ABCD3P28288 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ABCD3P28288 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ABCD3P28288 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
ABCD3P28288 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
ABCD3P28288 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ABCD3P28288 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
ABCD3P28288 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ABCD3P28288 MTND4P13-201ENST00000402078 1023 ntBASIC4.31□□□□□ -1.72
ABCD3P28288 MTND4LP20-201ENST00000402379 270 ntBASIC4.31□□□□□ -1.72
ABCD3P28288 HMGB1P17-201ENST00000403495 628 ntBASIC4.31□□□□□ -1.72
ABCD3P28288 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.31□□□□□ -1.72
ABCD3P28288 AC092447.3-201ENST00000426027 686 ntBASIC4.31□□□□□ -1.72
ABCD3P28288 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC4.31□□□□□ -1.72
ABCD3P28288 AL359265.2-201ENST00000434367 631 ntBASIC4.31□□□□□ -1.72
ABCD3P28288 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC4.31□□□□□ -1.72
ABCD3P28288 AL008629.1-201ENST00000438615 184 ntBASIC4.31□□□□□ -1.72
ABCD3P28288 AC104651.2-201ENST00000447549 528 ntBASIC4.31□□□□□ -1.72
ABCD3P28288 RSL24D1P3-201ENST00000449255 495 ntBASIC4.31□□□□□ -1.72
ABCD3P28288 USP9YP34-201ENST00000453983 808 ntBASIC4.31□□□□□ -1.72
ABCD3P28288 RPL36AP41-201ENST00000493820 306 ntBASIC4.31□□□□□ -1.72
ABCD3P28288 AC021146.8-201ENST00000507455 733 ntBASIC4.31□□□□□ -1.72
ABCD3P28288 XKRY-201ENST00000510392 1100 ntBASIC4.31□□□□□ -1.72
ABCD3P28288 HSPA8P13-201ENST00000523715 472 ntBASIC4.31□□□□□ -1.72
ABCD3P28288 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.31□□□□□ -1.72
ABCD3P28288 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC4.31□□□□□ -1.72
ABCD3P28288 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.31□□□□□ -1.72
ABCD3P28288 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ABCD3P28288 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.31□□□□□ -1.72
ABCD3P28288 AL133457.1-201ENST00000564251 987 ntBASIC4.31□□□□□ -1.72
ABCD3P28288 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.31□□□□□ -1.72
ABCD3P28288 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.31□□□□□ -1.72
ABCD3P28288 AC002400.1-201ENST00000569310 726 ntBASIC4.31□□□□□ -1.72
ABCD3P28288 RN7SL690P-201ENST00000582087 240 ntBASIC4.31□□□□□ -1.72
ABCD3P28288 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.31□□□□□ -1.72
ABCD3P28288 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.31□□□□□ -1.72
ABCD3P28288 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.31□□□□□ -1.72
ABCD3P28288 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.31□□□□□ -1.72
ABCD3P28288 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.31□□□□□ -1.72
ABCD3P28288 BNIP3P11-201ENST00000603878 563 ntBASIC4.31□□□□□ -1.72
ABCD3P28288 AL031281.1-201ENST00000604049 488 ntBASIC4.31□□□□□ -1.72
ABCD3P28288 Z99289.3-201ENST00000605586 594 ntBASIC4.31□□□□□ -1.72
ABCD3P28288 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.31□□□□□ -1.72
ABCD3P28288 MIR6780A-201ENST00000615089 68 ntBASIC4.31□□□□□ -1.72
ABCD3P28288 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ABCD3P28288 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.31□□□□□ -1.72
ABCD3P28288 NUP58P1-201ENST00000502546 1738 ntBASIC4.31□□□□□ -1.72
ABCD3P28288 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ABCD3P28288 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms