Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 RPL31P12-201ENST00000422587 358 ntBASIC2.76□□□□□ -1.97
HLA-DMBP28068 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC2.76□□□□□ -1.97
HLA-DMBP28068 GOT2P5-201ENST00000433995 546 ntBASIC2.76□□□□□ -1.97
HLA-DMBP28068 CBX1P4-201ENST00000439415 457 ntBASIC2.76□□□□□ -1.97
HLA-DMBP28068 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC2.76□□□□□ -1.97
HLA-DMBP28068 SETD6P1-201ENST00000444575 317 ntBASIC2.76□□□□□ -1.97
HLA-DMBP28068 AL133547.1-201ENST00000448546 220 ntBASIC2.76□□□□□ -1.97
HLA-DMBP28068 RPL12P26-201ENST00000452430 487 ntBASIC2.76□□□□□ -1.97
HLA-DMBP28068 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC2.76□□□□□ -1.97
HLA-DMBP28068 AC006539.3-201ENST00000454258 129 ntBASIC2.76□□□□□ -1.97
HLA-DMBP28068 AC099563.1-201ENST00000456086 418 ntBASIC2.76□□□□□ -1.97
HLA-DMBP28068 AC010468.1-201ENST00000461022 817 ntBASIC2.76□□□□□ -1.97
HLA-DMBP28068 RPL7P15-201ENST00000461190 712 ntBASIC2.76□□□□□ -1.97
HLA-DMBP28068 AC092451.1-201ENST00000480211 153 ntBASIC2.76□□□□□ -1.97
HLA-DMBP28068 ACTR3P3-201ENST00000480448 893 ntBASIC2.76□□□□□ -1.97
HLA-DMBP28068 AP000926.3-201ENST00000497201 299 ntBASIC2.76□□□□□ -1.97
HLA-DMBP28068 MTATP6P22-201ENST00000507369 598 ntBASIC2.76□□□□□ -1.97
HLA-DMBP28068 AC021146.7-201ENST00000509604 775 ntBASIC2.76□□□□□ -1.97
HLA-DMBP28068 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC2.76□□□□□ -1.97
HLA-DMBP28068 RNA5SP164-201ENST00000516533 110 ntBASIC2.76□□□□□ -1.97
HLA-DMBP28068 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC2.76□□□□□ -1.97
HLA-DMBP28068 AC022616.2-201ENST00000523185 300 ntBASIC2.76□□□□□ -1.97
HLA-DMBP28068 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC2.76□□□□□ -1.97
HLA-DMBP28068 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC2.76□□□□□ -1.97
HLA-DMBP28068 CYP2C60P-201ENST00000566088 139 ntBASIC2.76□□□□□ -1.97
HLA-DMBP28068 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC2.76□□□□□ -1.97
HLA-DMBP28068 AC087499.8-201ENST00000578406 226 ntBASIC2.76□□□□□ -1.97
HLA-DMBP28068 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.76□□□□□ -1.97
HLA-DMBP28068 CR392039.4-201ENST00000624968 501 ntBASIC2.76□□□□□ -1.97
HLA-DMBP28068 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC2.76□□□□□ -1.97
HLA-DMBP28068 METTL8-218ENST00000638989 876 ntTSL 5 BASIC2.76□□□□□ -1.97
HLA-DMBP28068 METTL8-219ENST00000640734 726 ntTSL 2 BASIC2.76□□□□□ -1.97
HLA-DMBP28068 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
HLA-DMBP28068 AC138915.3-201ENST00000562908 1389 ntBASIC2.75□□□□□ -1.97
HLA-DMBP28068 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC2.75□□□□□ -1.97
HLA-DMBP28068 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
HLA-DMBP28068 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
HLA-DMBP28068 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
HLA-DMBP28068 RNA5SP42-201ENST00000364278 115 ntBASIC2.75□□□□□ -1.97
HLA-DMBP28068 RNU6-670P-201ENST00000364312 104 ntBASIC2.75□□□□□ -1.97
HLA-DMBP28068 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
HLA-DMBP28068 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC2.75□□□□□ -1.97
HLA-DMBP28068 LIPT1P1-201ENST00000415870 1186 ntBASIC2.75□□□□□ -1.97
HLA-DMBP28068 AL691447.1-201ENST00000419456 387 ntBASIC2.75□□□□□ -1.97
HLA-DMBP28068 RPL31P45-201ENST00000419532 356 ntBASIC2.75□□□□□ -1.97
HLA-DMBP28068 AL390879.2-203ENST00000426943 1121 ntBASIC2.75□□□□□ -1.97
HLA-DMBP28068 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC2.75□□□□□ -1.97
HLA-DMBP28068 RPS24P8-201ENST00000431490 402 ntBASIC2.75□□□□□ -1.97
HLA-DMBP28068 MTCO1P52-201ENST00000433928 531 ntBASIC2.75□□□□□ -1.97
HLA-DMBP28068 NOTCH2P1-201ENST00000443481 624 ntBASIC2.75□□□□□ -1.97
HLA-DMBP28068 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
HLA-DMBP28068 VN1R34P-201ENST00000447387 883 ntBASIC2.75□□□□□ -1.97
HLA-DMBP28068 TPMTP4-201ENST00000450749 678 ntBASIC2.75□□□□□ -1.97
HLA-DMBP28068 C1DP3-201ENST00000455013 423 ntBASIC2.75□□□□□ -1.97
HLA-DMBP28068 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC2.75□□□□□ -1.97
HLA-DMBP28068 AC091564.1-201ENST00000464563 479 ntBASIC2.75□□□□□ -1.97
HLA-DMBP28068 RPS20P21-201ENST00000466859 343 ntBASIC2.75□□□□□ -1.97
HLA-DMBP28068 AC022034.3-201ENST00000471393 478 ntBASIC2.75□□□□□ -1.97
HLA-DMBP28068 AC084357.1-201ENST00000473404 255 ntBASIC2.75□□□□□ -1.97
HLA-DMBP28068 TAF8-207ENST00000482432 556 ntTSL 2 BASIC2.75□□□□□ -1.97
HLA-DMBP28068 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC2.75□□□□□ -1.97
HLA-DMBP28068 PDLIM1P4-201ENST00000504327 1006 ntBASIC2.75□□□□□ -1.97
HLA-DMBP28068 AC026784.1-201ENST00000507986 352 ntBASIC2.75□□□□□ -1.97
HLA-DMBP28068 HMGN1P11-201ENST00000508668 303 ntBASIC2.75□□□□□ -1.97
HLA-DMBP28068 PHBP14-201ENST00000512887 367 ntBASIC2.75□□□□□ -1.97
HLA-DMBP28068 RNU6-1308P-201ENST00000516817 103 ntBASIC2.75□□□□□ -1.97
HLA-DMBP28068 PAICSP4-201ENST00000517543 1253 ntBASIC2.75□□□□□ -1.97
HLA-DMBP28068 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC2.75□□□□□ -1.97
HLA-DMBP28068 TRMT10BP1-201ENST00000519377 943 ntBASIC2.75□□□□□ -1.97
HLA-DMBP28068 HIGD1AP18-201ENST00000520730 278 ntBASIC2.75□□□□□ -1.97
HLA-DMBP28068 STX3-204ENST00000530221 534 ntTSL 5 BASIC2.75□□□□□ -1.97
HLA-DMBP28068 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC2.75□□□□□ -1.97
HLA-DMBP28068 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC2.75□□□□□ -1.97
HLA-DMBP28068 AL365503.1-201ENST00000605247 905 ntBASIC2.75□□□□□ -1.97
HLA-DMBP28068 AC011816.2-201ENST00000607089 556 ntBASIC2.75□□□□□ -1.97
HLA-DMBP28068 AL391497.1-201ENST00000608671 547 ntBASIC2.75□□□□□ -1.97
HLA-DMBP28068 AC105429.2-201ENST00000610567 517 ntBASIC2.75□□□□□ -1.97
HLA-DMBP28068 AC011472.4-201ENST00000615848 491 ntBASIC2.75□□□□□ -1.97
HLA-DMBP28068 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
HLA-DMBP28068 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC2.75□□□□□ -1.97
HLA-DMBP28068 AC093908.1-201ENST00000623125 8092 ntBASIC2.75□□□□□ -1.97
HLA-DMBP28068 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC2.75□□□□□ -1.97
HLA-DMBP28068 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
HLA-DMBP28068 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC2.74□□□□□ -1.97
HLA-DMBP28068 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
HLA-DMBP28068 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC2.74□□□□□ -1.97
HLA-DMBP28068 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
HLA-DMBP28068 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
HLA-DMBP28068 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
HLA-DMBP28068 RNA5SP167-201ENST00000365461 116 ntBASIC2.74□□□□□ -1.97
HLA-DMBP28068 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
HLA-DMBP28068 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC2.74□□□□□ -1.97
HLA-DMBP28068 RNU6-244P-201ENST00000391028 104 ntBASIC2.74□□□□□ -1.97
HLA-DMBP28068 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
HLA-DMBP28068 MTND4P22-201ENST00000413116 1169 ntBASIC2.74□□□□□ -1.97
HLA-DMBP28068 AL591419.1-201ENST00000427423 339 ntBASIC2.74□□□□□ -1.97
HLA-DMBP28068 TRIM60P3Y-201ENST00000432201 673 ntBASIC2.74□□□□□ -1.97
HLA-DMBP28068 MTCYBP12-201ENST00000440559 1134 ntBASIC2.74□□□□□ -1.97
HLA-DMBP28068 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC2.74□□□□□ -1.97
HLA-DMBP28068 MTND2P8-201ENST00000450555 1025 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms