Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
HMGA1P17096 OR5H2-201ENST00000355273 945 ntBASIC3.27□□□□□ -1.89
HMGA1P17096 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
HMGA1P17096 Y_RNA.111-201ENST00000363248 100 ntBASIC3.27□□□□□ -1.89
HMGA1P17096 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
HMGA1P17096 AP002088.1-201ENST00000382740 395 ntBASIC3.27□□□□□ -1.89
HMGA1P17096 MIR634-201ENST00000385208 97 ntBASIC3.27□□□□□ -1.89
HMGA1P17096 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HMGA1P17096 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC3.27□□□□□ -1.89
HMGA1P17096 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.27□□□□□ -1.89
HMGA1P17096 AC016696.1-201ENST00000446949 318 ntBASIC3.27□□□□□ -1.89
HMGA1P17096 NANOGNBP1-201ENST00000448444 480 ntBASIC3.27□□□□□ -1.89
HMGA1P17096 AC105918.1-201ENST00000474399 838 ntBASIC3.27□□□□□ -1.89
HMGA1P17096 RPS3AP14-201ENST00000483907 780 ntBASIC3.27□□□□□ -1.89
HMGA1P17096 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HMGA1P17096 AP002404.1-201ENST00000532005 451 ntBASIC3.27□□□□□ -1.89
HMGA1P17096 AC018552.3-201ENST00000567416 561 ntBASIC3.27□□□□□ -1.89
HMGA1P17096 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.27□□□□□ -1.89
HMGA1P17096 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.27□□□□□ -1.89
HMGA1P17096 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC3.27□□□□□ -1.89
HMGA1P17096 RMST_8.1-201ENST00000610287 165 ntBASIC3.27□□□□□ -1.89
HMGA1P17096 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.27□□□□□ -1.89
HMGA1P17096 HSPA8P1-201ENST00000425843 1833 ntBASIC3.27□□□□□ -1.89
HMGA1P17096 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
HMGA1P17096 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
HMGA1P17096 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HMGA1P17096 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HMGA1P17096 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.26□□□□□ -1.89
HMGA1P17096 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.26□□□□□ -1.89
HMGA1P17096 OR52B1P-201ENST00000316506 909 ntBASIC3.26□□□□□ -1.89
HMGA1P17096 RNU1-140P-201ENST00000365040 165 ntBASIC3.26□□□□□ -1.89
HMGA1P17096 SNORD15B-201ENST00000384714 146 ntBASIC3.26□□□□□ -1.89
HMGA1P17096 RPL35AP12-201ENST00000425362 338 ntBASIC3.26□□□□□ -1.89
HMGA1P17096 AC108734.1-201ENST00000439549 399 ntBASIC3.26□□□□□ -1.89
HMGA1P17096 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC3.26□□□□□ -1.89
HMGA1P17096 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.26□□□□□ -1.89
HMGA1P17096 PRDX3P4-201ENST00000470828 747 ntBASIC3.26□□□□□ -1.89
HMGA1P17096 AC091544.1-201ENST00000484702 348 ntBASIC3.26□□□□□ -1.89
HMGA1P17096 AC021146.1-201ENST00000511202 716 ntBASIC3.26□□□□□ -1.89
HMGA1P17096 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC3.26□□□□□ -1.89
HMGA1P17096 RNU1-103P-201ENST00000516502 125 ntBASIC3.26□□□□□ -1.89
HMGA1P17096 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.26□□□□□ -1.89
HMGA1P17096 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.26□□□□□ -1.89
HMGA1P17096 AL033523.1-201ENST00000605153 153 ntBASIC3.26□□□□□ -1.89
HMGA1P17096 AC091903.1-201ENST00000624322 454 ntBASIC3.26□□□□□ -1.89
HMGA1P17096 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC3.26□□□□□ -1.89
HMGA1P17096 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.26□□□□□ -1.89
HMGA1P17096 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HMGA1P17096 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
HMGA1P17096 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.26□□□□□ -1.89
HMGA1P17096 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HMGA1P17096 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
HMGA1P17096 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
HMGA1P17096 AC007496.3-201ENST00000624987 3443 ntBASIC3.25□□□□□ -1.89
HMGA1P17096 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HMGA1P17096 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HMGA1P17096 RPL5P18-201ENST00000406671 891 ntBASIC3.25□□□□□ -1.89
HMGA1P17096 RNA5SP31-201ENST00000411144 127 ntBASIC3.25□□□□□ -1.89
HMGA1P17096 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.25□□□□□ -1.89
HMGA1P17096 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.25□□□□□ -1.89
HMGA1P17096 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.25□□□□□ -1.89
HMGA1P17096 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.25□□□□□ -1.89
HMGA1P17096 RPL37P3-201ENST00000456825 293 ntBASIC3.25□□□□□ -1.89
HMGA1P17096 SCARNA20.6-201ENST00000517251 106 ntBASIC3.25□□□□□ -1.89
HMGA1P17096 IGLVIV-53-201ENST00000520107 367 ntBASIC3.25□□□□□ -1.89
HMGA1P17096 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
HMGA1P17096 AC022080.3-201ENST00000544433 482 ntBASIC3.25□□□□□ -1.89
HMGA1P17096 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.25□□□□□ -1.89
HMGA1P17096 AC093732.2-201ENST00000607950 274 ntBASIC3.25□□□□□ -1.89
HMGA1P17096 AL162574.2-201ENST00000614618 657 ntBASIC3.25□□□□□ -1.89
HMGA1P17096 AC073476.4-201ENST00000628409 72 ntBASIC3.25□□□□□ -1.89
HMGA1P17096 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.25□□□□□ -1.89
HMGA1P17096 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HMGA1P17096 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
HMGA1P17096 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HMGA1P17096 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.24□□□□□ -1.89
HMGA1P17096 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.24□□□□□ -1.89
HMGA1P17096 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
HMGA1P17096 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
HMGA1P17096 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.24□□□□□ -1.89
HMGA1P17096 SNORA80A-201ENST00000363922 136 ntBASIC3.24□□□□□ -1.89
HMGA1P17096 SNORD67-201ENST00000390833 111 ntBASIC3.24□□□□□ -1.89
HMGA1P17096 RPL23AP48-201ENST00000406913 488 ntBASIC3.24□□□□□ -1.89
HMGA1P17096 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC3.24□□□□□ -1.89
HMGA1P17096 RPL6P21-201ENST00000418672 846 ntBASIC3.24□□□□□ -1.89
HMGA1P17096 AC140076.1-201ENST00000449897 361 ntBASIC3.24□□□□□ -1.89
HMGA1P17096 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.24□□□□□ -1.89
HMGA1P17096 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC3.24□□□□□ -1.89
HMGA1P17096 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.24□□□□□ -1.89
HMGA1P17096 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HMGA1P17096 RNU6-1231P-201ENST00000517185 103 ntBASIC3.24□□□□□ -1.89
HMGA1P17096 AF186190.1-201ENST00000517470 480 ntBASIC3.24□□□□□ -1.89
HMGA1P17096 AC009812.2-201ENST00000517657 457 ntBASIC3.24□□□□□ -1.89
HMGA1P17096 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC3.24□□□□□ -1.89
HMGA1P17096 NDUFB9P3-201ENST00000521269 501 ntBASIC3.24□□□□□ -1.89
HMGA1P17096 AC011602.1-201ENST00000546484 331 ntBASIC3.24□□□□□ -1.89
HMGA1P17096 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.24□□□□□ -1.89
HMGA1P17096 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.24□□□□□ -1.89
HMGA1P17096 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.24□□□□□ -1.89
HMGA1P17096 LARP7P3-201ENST00000579888 337 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms