Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC8.65□□□□□ -1.02
CHGAP10645 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
CHGAP10645 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
CHGAP10645 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC8.65□□□□□ -1.02
CHGAP10645 SNORA64.1-201ENST00000362600 132 ntBASIC8.65□□□□□ -1.02
CHGAP10645 RN7SKP162-201ENST00000363605 345 ntBASIC8.65□□□□□ -1.02
CHGAP10645 RNY3P13-201ENST00000365542 102 ntBASIC8.65□□□□□ -1.02
CHGAP10645 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC8.65□□□□□ -1.02
CHGAP10645 MTCYBP10-201ENST00000424905 650 ntBASIC8.65□□□□□ -1.02
CHGAP10645 AL590233.1-201ENST00000430017 456 ntBASIC8.65□□□□□ -1.02
CHGAP10645 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC8.65□□□□□ -1.02
CHGAP10645 AL133244.1-201ENST00000456007 258 ntBASIC8.65□□□□□ -1.02
CHGAP10645 ELOCP24-201ENST00000456370 334 ntBASIC8.65□□□□□ -1.02
CHGAP10645 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC8.65□□□□□ -1.02
CHGAP10645 RPS29P15-201ENST00000458329 171 ntBASIC8.65□□□□□ -1.02
CHGAP10645 snoU13.8-201ENST00000458890 104 ntBASIC8.65□□□□□ -1.02
CHGAP10645 Y_RNA.653-201ENST00000459091 95 ntBASIC8.65□□□□□ -1.02
CHGAP10645 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
CHGAP10645 SNORA43.3-201ENST00000517240 103 ntBASIC8.65□□□□□ -1.02
CHGAP10645 OR5D15P-201ENST00000531671 942 ntBASIC8.65□□□□□ -1.02
CHGAP10645 AP000889.2-201ENST00000532684 490 ntBASIC8.65□□□□□ -1.02
CHGAP10645 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC8.65□□□□□ -1.02
CHGAP10645 MIR3942-201ENST00000585264 109 ntBASIC8.65□□□□□ -1.02
CHGAP10645 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC8.65□□□□□ -1.02
CHGAP10645 GMFG-212ENST00000602185 423 ntTSL 3 BASIC8.65□□□□□ -1.02
CHGAP10645 WDR75-207ENST00000631047 270 ntTSL 5 BASIC8.65□□□□□ -1.02
CHGAP10645 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
CHGAP10645 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
CHGAP10645 HSPA8P14-201ENST00000552265 1805 ntBASIC8.65□□□□□ -1.02
CHGAP10645 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
CHGAP10645 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
CHGAP10645 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
CHGAP10645 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC8.65□□□□□ -1.03
CHGAP10645 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC8.65□□□□□ -1.03
CHGAP10645 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
CHGAP10645 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
CHGAP10645 AC123769.1-201ENST00000530992 3192 ntBASIC8.65□□□□□ -1.03
CHGAP10645 AL139805.2-201ENST00000455305 2433 ntBASIC8.64□□□□□ -1.03
CHGAP10645 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC8.64□□□□□ -1.03
CHGAP10645 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
CHGAP10645 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC8.64□□□□□ -1.03
CHGAP10645 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
CHGAP10645 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
CHGAP10645 RNA5SP46-201ENST00000362370 120 ntBASIC8.64□□□□□ -1.03
CHGAP10645 PARD3-204ENST00000374768 799 ntTSL 3 BASIC8.64□□□□□ -1.03
CHGAP10645 RNU6-316P-201ENST00000391027 107 ntBASIC8.64□□□□□ -1.03
CHGAP10645 AC016739.1-201ENST00000405359 345 ntBASIC8.64□□□□□ -1.03
CHGAP10645 MIR1302-3-201ENST00000408128 138 ntBASIC8.64□□□□□ -1.03
CHGAP10645 RNU6-985P-201ENST00000410182 104 ntBASIC8.64□□□□□ -1.03
CHGAP10645 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC8.64□□□□□ -1.03
CHGAP10645 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC8.64□□□□□ -1.03
CHGAP10645 MED13P1-201ENST00000428342 171 ntBASIC8.64□□□□□ -1.03
CHGAP10645 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC8.64□□□□□ -1.03
CHGAP10645 UBE2V1P13-201ENST00000436983 439 ntBASIC8.64□□□□□ -1.03
CHGAP10645 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC8.64□□□□□ -1.03
CHGAP10645 RNU6-1208P-201ENST00000459588 107 ntBASIC8.64□□□□□ -1.03
CHGAP10645 SIAH1P1-201ENST00000479411 923 ntBASIC8.64□□□□□ -1.03
CHGAP10645 ALDH7A1P3-201ENST00000492517 345 ntBASIC8.64□□□□□ -1.03
CHGAP10645 AC005912.1-201ENST00000495392 255 ntBASIC8.64□□□□□ -1.03
CHGAP10645 MTCYBP40-201ENST00000509390 1135 ntBASIC8.64□□□□□ -1.03
CHGAP10645 AC103843.2-201ENST00000530523 682 ntBASIC8.64□□□□□ -1.03
CHGAP10645 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC8.64□□□□□ -1.03
CHGAP10645 LSM3P2-201ENST00000551246 273 ntBASIC8.64□□□□□ -1.03
CHGAP10645 AC090651.1-201ENST00000567865 634 ntBASIC8.64□□□□□ -1.03
CHGAP10645 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC8.64□□□□□ -1.03
CHGAP10645 MIR4775-201ENST00000581168 75 ntBASIC8.64□□□□□ -1.03
CHGAP10645 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC8.64□□□□□ -1.03
CHGAP10645 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC8.64□□□□□ -1.03
CHGAP10645 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC8.64□□□□□ -1.03
CHGAP10645 uc_338.26-201ENST00000612659 160 ntBASIC8.64□□□□□ -1.03
CHGAP10645 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC8.64□□□□□ -1.03
CHGAP10645 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC8.64□□□□□ -1.03
CHGAP10645 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
CHGAP10645 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
CHGAP10645 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
CHGAP10645 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
CHGAP10645 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
CHGAP10645 AC110716.2-201ENST00000563865 3945 ntBASIC8.64□□□□□ -1.03
CHGAP10645 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
CHGAP10645 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC8.64□□□□□ -1.03
CHGAP10645 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
CHGAP10645 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC8.64□□□□□ -1.03
CHGAP10645 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC8.64□□□□□ -1.03
CHGAP10645 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
CHGAP10645 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC8.64□□□□□ -1.03
CHGAP10645 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC8.64□□□□□ -1.03
CHGAP10645 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
CHGAP10645 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC8.63□□□□□ -1.03
CHGAP10645 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
CHGAP10645 AC011933.2-201ENST00000578539 2790 ntBASIC8.63□□□□□ -1.03
CHGAP10645 EEF1A1P24-201ENST00000451469 1378 ntBASIC8.63□□□□□ -1.03
CHGAP10645 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
CHGAP10645 MFSD8-219ENST00000641228 2559 ntBASIC8.63□□□□□ -1.03
CHGAP10645 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC8.63□□□□□ -1.03
CHGAP10645 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
CHGAP10645 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
CHGAP10645 RNU6-97P-201ENST00000363387 104 ntBASIC8.63□□□□□ -1.03
CHGAP10645 RNU6-505P-201ENST00000384427 107 ntBASIC8.63□□□□□ -1.03
CHGAP10645 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
CHGAP10645 AL121834.1-202ENST00000404494 277 ntBASIC8.63□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms