Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 AC109458.1-201ENST00000508858 316 ntBASIC3.62□□□□□ -1.83
HOXC4P09017 AC104619.4-201ENST00000510773 249 ntBASIC3.62□□□□□ -1.83
HOXC4P09017 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.62□□□□□ -1.83
HOXC4P09017 DUXAP2-201ENST00000519198 589 ntBASIC3.62□□□□□ -1.83
HOXC4P09017 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.62□□□□□ -1.83
HOXC4P09017 OR4R2P-201ENST00000530815 597 ntBASIC3.62□□□□□ -1.83
HOXC4P09017 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
HOXC4P09017 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.62□□□□□ -1.83
HOXC4P09017 AL136520.1-202ENST00000555494 763 ntBASIC3.62□□□□□ -1.83
HOXC4P09017 AC023158.1-201ENST00000561632 1025 ntBASIC3.62□□□□□ -1.83
HOXC4P09017 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.62□□□□□ -1.83
HOXC4P09017 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.62□□□□□ -1.83
HOXC4P09017 AC010591.1-201ENST00000603941 649 ntBASIC3.62□□□□□ -1.83
HOXC4P09017 AL355816.1-201ENST00000607951 118 ntBASIC3.62□□□□□ -1.83
HOXC4P09017 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HOXC4P09017 AC009032.1-201ENST00000617574 431 ntBASIC3.62□□□□□ -1.83
HOXC4P09017 AL162233.1-201ENST00000620014 944 ntBASIC3.62□□□□□ -1.83
HOXC4P09017 AC244258.1-201ENST00000637553 1071 ntBASIC3.62□□□□□ -1.83
HOXC4P09017 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HOXC4P09017 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HOXC4P09017 RPS4XP5-202ENST00000449995 1334 ntBASIC3.62□□□□□ -1.83
HOXC4P09017 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HOXC4P09017 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.62□□□□□ -1.83
HOXC4P09017 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
HOXC4P09017 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.62□□□□□ -1.83
HOXC4P09017 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
HOXC4P09017 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
HOXC4P09017 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HOXC4P09017 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.62□□□□□ -1.83
HOXC4P09017 AL139811.1-201ENST00000424779 2299 ntBASIC3.61□□□□□ -1.83
HOXC4P09017 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HOXC4P09017 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HOXC4P09017 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.61□□□□□ -1.83
HOXC4P09017 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
HOXC4P09017 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HOXC4P09017 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.61□□□□□ -1.83
HOXC4P09017 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
HOXC4P09017 AC234772.1-201ENST00000377927 937 ntBASIC3.61□□□□□ -1.83
HOXC4P09017 RNU4-31P-201ENST00000384211 141 ntBASIC3.61□□□□□ -1.83
HOXC4P09017 RNA5SP44-201ENST00000410446 133 ntBASIC3.61□□□□□ -1.83
HOXC4P09017 RN7SKP56-201ENST00000410513 331 ntBASIC3.61□□□□□ -1.83
HOXC4P09017 MTND4P11-201ENST00000417020 1058 ntBASIC3.61□□□□□ -1.83
HOXC4P09017 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.61□□□□□ -1.83
HOXC4P09017 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.61□□□□□ -1.83
HOXC4P09017 AL451062.2-201ENST00000427515 271 ntBASIC3.61□□□□□ -1.83
HOXC4P09017 MTND4LP7-201ENST00000431728 294 ntBASIC3.61□□□□□ -1.83
HOXC4P09017 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.61□□□□□ -1.83
HOXC4P09017 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HOXC4P09017 AC092641.1-201ENST00000440229 772 ntBASIC3.61□□□□□ -1.83
HOXC4P09017 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.61□□□□□ -1.83
HOXC4P09017 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC3.61□□□□□ -1.83
HOXC4P09017 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.61□□□□□ -1.83
HOXC4P09017 DNAJC19P1-201ENST00000455312 319 ntBASIC3.61□□□□□ -1.83
HOXC4P09017 AC069499.1-201ENST00000489433 509 ntBASIC3.61□□□□□ -1.83
HOXC4P09017 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.61□□□□□ -1.83
HOXC4P09017 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.61□□□□□ -1.83
HOXC4P09017 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.61□□□□□ -1.83
HOXC4P09017 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.61□□□□□ -1.83
HOXC4P09017 MTND4LP25-201ENST00000570218 163 ntBASIC3.61□□□□□ -1.83
HOXC4P09017 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.61□□□□□ -1.83
HOXC4P09017 EIF1P6-201ENST00000600054 334 ntBASIC3.61□□□□□ -1.83
HOXC4P09017 AC010680.3-201ENST00000604215 520 ntBASIC3.61□□□□□ -1.83
HOXC4P09017 AC055764.2-201ENST00000610089 670 ntBASIC3.61□□□□□ -1.83
HOXC4P09017 MIR7851-201ENST00000610611 160 ntBASIC3.61□□□□□ -1.83
HOXC4P09017 AC019176.2-201ENST00000611579 315 ntBASIC3.61□□□□□ -1.83
HOXC4P09017 AC069209.1-201ENST00000619282 651 ntBASIC3.61□□□□□ -1.83
HOXC4P09017 AL713922.2-201ENST00000619384 716 ntBASIC3.61□□□□□ -1.83
HOXC4P09017 AL732618.1-201ENST00000623251 301 ntBASIC3.61□□□□□ -1.83
HOXC4P09017 AP003072.4-201ENST00000624580 310 ntBASIC3.61□□□□□ -1.83
HOXC4P09017 AP001002.2-201ENST00000625137 386 ntBASIC3.61□□□□□ -1.83
HOXC4P09017 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.61□□□□□ -1.83
HOXC4P09017 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.61□□□□□ -1.83
HOXC4P09017 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HOXC4P09017 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HOXC4P09017 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.61□□□□□ -1.83
HOXC4P09017 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HOXC4P09017 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
HOXC4P09017 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HOXC4P09017 AL356274.2-201ENST00000624379 3752 ntBASIC3.6□□□□□ -1.83
HOXC4P09017 TNPO1P3-201ENST00000436471 2662 ntBASIC3.6□□□□□ -1.83
HOXC4P09017 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.6□□□□□ -1.83
HOXC4P09017 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
HOXC4P09017 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HOXC4P09017 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HOXC4P09017 SNORD6-201ENST00000365444 73 ntBASIC3.6□□□□□ -1.83
HOXC4P09017 RNU6-883P-201ENST00000384597 107 ntBASIC3.6□□□□□ -1.83
HOXC4P09017 ATP5F1P4-201ENST00000397288 746 ntBASIC3.6□□□□□ -1.83
HOXC4P09017 RN7SKP177-201ENST00000410567 355 ntBASIC3.6□□□□□ -1.83
HOXC4P09017 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.6□□□□□ -1.83
HOXC4P09017 AC105402.1-201ENST00000413336 545 ntBASIC3.6□□□□□ -1.83
HOXC4P09017 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.6□□□□□ -1.83
HOXC4P09017 LINC01881-201ENST00000416103 412 ntBASIC3.6□□□□□ -1.83
HOXC4P09017 MTCO1P57-201ENST00000432182 261 ntBASIC3.6□□□□□ -1.83
HOXC4P09017 HSFY7P-201ENST00000432672 318 ntBASIC3.6□□□□□ -1.83
HOXC4P09017 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.6□□□□□ -1.83
HOXC4P09017 AL031663.1-201ENST00000437445 219 ntBASIC3.6□□□□□ -1.83
HOXC4P09017 HSFY8P-201ENST00000437934 318 ntBASIC3.6□□□□□ -1.83
HOXC4P09017 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
HOXC4P09017 CBX1P4-201ENST00000439415 457 ntBASIC3.6□□□□□ -1.83
HOXC4P09017 RPL21P23-201ENST00000446654 460 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms