Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 HMGB3P11-201ENST00000440127 604 ntBASIC3.35□□□□□ -1.87
HLA-DQB2P05538 RPL6P5-201ENST00000445678 828 ntBASIC3.35□□□□□ -1.87
HLA-DQB2P05538 PRDX3P3-201ENST00000447765 522 ntBASIC3.35□□□□□ -1.87
HLA-DQB2P05538 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.35□□□□□ -1.87
HLA-DQB2P05538 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC3.35□□□□□ -1.87
HLA-DQB2P05538 AC068305.1-201ENST00000497406 726 ntBASIC3.35□□□□□ -1.87
HLA-DQB2P05538 AC113398.2-201ENST00000507630 558 ntBASIC3.35□□□□□ -1.87
HLA-DQB2P05538 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HLA-DQB2P05538 FTH1P9-201ENST00000513251 355 ntBASIC3.35□□□□□ -1.87
HLA-DQB2P05538 FABP5P12-201ENST00000515543 389 ntBASIC3.35□□□□□ -1.87
HLA-DQB2P05538 DUXAP2-201ENST00000519198 589 ntBASIC3.35□□□□□ -1.87
HLA-DQB2P05538 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.35□□□□□ -1.87
HLA-DQB2P05538 AP001636.2-201ENST00000525517 696 ntBASIC3.35□□□□□ -1.87
HLA-DQB2P05538 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HLA-DQB2P05538 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
HLA-DQB2P05538 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.35□□□□□ -1.87
HLA-DQB2P05538 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.35□□□□□ -1.87
HLA-DQB2P05538 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC3.35□□□□□ -1.87
HLA-DQB2P05538 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.35□□□□□ -1.87
HLA-DQB2P05538 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.35□□□□□ -1.87
HLA-DQB2P05538 AC012213.4-201ENST00000606457 354 ntBASIC3.35□□□□□ -1.87
HLA-DQB2P05538 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC3.35□□□□□ -1.87
HLA-DQB2P05538 uc_338.1-201ENST00000612113 180 ntBASIC3.35□□□□□ -1.87
HLA-DQB2P05538 AC243654.2-201ENST00000612843 443 ntBASIC3.35□□□□□ -1.87
HLA-DQB2P05538 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
HLA-DQB2P05538 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HLA-DQB2P05538 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
HLA-DQB2P05538 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.35□□□□□ -1.87
HLA-DQB2P05538 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
HLA-DQB2P05538 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HLA-DQB2P05538 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HLA-DQB2P05538 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.34□□□□□ -1.87
HLA-DQB2P05538 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HLA-DQB2P05538 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HLA-DQB2P05538 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
HLA-DQB2P05538 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
HLA-DQB2P05538 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
HLA-DQB2P05538 AL034374.1-201ENST00000406329 351 ntBASIC3.34□□□□□ -1.87
HLA-DQB2P05538 AC063979.1-201ENST00000415539 377 ntBASIC3.34□□□□□ -1.87
HLA-DQB2P05538 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.34□□□□□ -1.87
HLA-DQB2P05538 AL138785.1-201ENST00000425821 331 ntBASIC3.34□□□□□ -1.87
HLA-DQB2P05538 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC3.34□□□□□ -1.87
HLA-DQB2P05538 AC017083.1-201ENST00000428093 483 ntBASIC3.34□□□□□ -1.87
HLA-DQB2P05538 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.34□□□□□ -1.87
HLA-DQB2P05538 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HLA-DQB2P05538 AL050321.1-201ENST00000432363 400 ntBASIC3.34□□□□□ -1.87
HLA-DQB2P05538 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.34□□□□□ -1.87
HLA-DQB2P05538 HMGN1P18-201ENST00000457642 277 ntBASIC3.34□□□□□ -1.87
HLA-DQB2P05538 RNU6-1218P-201ENST00000458990 108 ntBASIC3.34□□□□□ -1.87
HLA-DQB2P05538 AC073522.1-201ENST00000483312 377 ntBASIC3.34□□□□□ -1.87
HLA-DQB2P05538 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.34□□□□□ -1.87
HLA-DQB2P05538 AC108471.1-201ENST00000513977 287 ntBASIC3.34□□□□□ -1.87
HLA-DQB2P05538 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC3.34□□□□□ -1.87
HLA-DQB2P05538 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.34□□□□□ -1.87
HLA-DQB2P05538 AP000619.3-201ENST00000535634 1127 ntBASIC3.34□□□□□ -1.87
HLA-DQB2P05538 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC3.34□□□□□ -1.87
HLA-DQB2P05538 RPL21P12-201ENST00000559810 515 ntBASIC3.34□□□□□ -1.87
HLA-DQB2P05538 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.34□□□□□ -1.87
HLA-DQB2P05538 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC3.34□□□□□ -1.87
HLA-DQB2P05538 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.34□□□□□ -1.87
HLA-DQB2P05538 AC008739.3-201ENST00000603262 127 ntBASIC3.34□□□□□ -1.87
HLA-DQB2P05538 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC3.34□□□□□ -1.87
HLA-DQB2P05538 MIR7975-201ENST00000619350 68 ntBASIC3.34□□□□□ -1.87
HLA-DQB2P05538 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.34□□□□□ -1.87
HLA-DQB2P05538 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
HLA-DQB2P05538 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.34□□□□□ -1.88
HLA-DQB2P05538 Z83843.1-201ENST00000604070 3685 ntBASIC3.34□□□□□ -1.88
HLA-DQB2P05538 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HLA-DQB2P05538 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.33□□□□□ -1.88
HLA-DQB2P05538 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HLA-DQB2P05538 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HLA-DQB2P05538 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HLA-DQB2P05538 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HLA-DQB2P05538 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
HLA-DQB2P05538 RNU6-304P-201ENST00000364855 107 ntBASIC3.33□□□□□ -1.88
HLA-DQB2P05538 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HLA-DQB2P05538 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
HLA-DQB2P05538 SNORA11-201ENST00000408789 128 ntBASIC3.33□□□□□ -1.88
HLA-DQB2P05538 HMGN1P24-201ENST00000412282 298 ntBASIC3.33□□□□□ -1.88
HLA-DQB2P05538 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.33□□□□□ -1.88
HLA-DQB2P05538 MTCYBP7-201ENST00000419540 1134 ntBASIC3.33□□□□□ -1.88
HLA-DQB2P05538 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.33□□□□□ -1.88
HLA-DQB2P05538 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.33□□□□□ -1.88
HLA-DQB2P05538 YME1L1P1-201ENST00000429435 297 ntBASIC3.33□□□□□ -1.88
HLA-DQB2P05538 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.33□□□□□ -1.88
HLA-DQB2P05538 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC3.33□□□□□ -1.88
HLA-DQB2P05538 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.33□□□□□ -1.88
HLA-DQB2P05538 SNRPGP5-201ENST00000456003 220 ntBASIC3.33□□□□□ -1.88
HLA-DQB2P05538 AC087312.1-201ENST00000471411 480 ntBASIC3.33□□□□□ -1.88
HLA-DQB2P05538 KATNBL1P4-201ENST00000503545 918 ntBASIC3.33□□□□□ -1.88
HLA-DQB2P05538 HAUS1P1-201ENST00000505275 832 ntBASIC3.33□□□□□ -1.88
HLA-DQB2P05538 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.33□□□□□ -1.88
HLA-DQB2P05538 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.33□□□□□ -1.88
HLA-DQB2P05538 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.33□□□□□ -1.88
HLA-DQB2P05538 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.33□□□□□ -1.88
HLA-DQB2P05538 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.33□□□□□ -1.88
HLA-DQB2P05538 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
HLA-DQB2P05538 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.33□□□□□ -1.88
HLA-DQB2P05538 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.33□□□□□ -1.88
HLA-DQB2P05538 AC011611.1-201ENST00000552179 197 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms