Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.69□□□□□ -1.82
APOEP02649 AC074367.1-201ENST00000438685 1125 ntBASIC3.69□□□□□ -1.82
APOEP02649 RPL21P23-201ENST00000446654 460 ntBASIC3.69□□□□□ -1.82
APOEP02649 AC021205.1-201ENST00000468797 348 ntBASIC3.69□□□□□ -1.82
APOEP02649 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.69□□□□□ -1.82
APOEP02649 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.69□□□□□ -1.82
APOEP02649 HMGB3P14-201ENST00000494195 599 ntBASIC3.69□□□□□ -1.82
APOEP02649 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.69□□□□□ -1.82
APOEP02649 RN7SKP13-201ENST00000515933 244 ntBASIC3.69□□□□□ -1.82
APOEP02649 SNORA70.18-201ENST00000516696 98 ntBASIC3.69□□□□□ -1.82
APOEP02649 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.69□□□□□ -1.82
APOEP02649 EIF4A2P3-201ENST00000525903 1055 ntBASIC3.69□□□□□ -1.82
APOEP02649 AC103843.2-201ENST00000530523 682 ntBASIC3.69□□□□□ -1.82
APOEP02649 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.69□□□□□ -1.82
APOEP02649 AC084373.1-201ENST00000603311 235 ntBASIC3.69□□□□□ -1.82
APOEP02649 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
APOEP02649 MIR8058-201ENST00000615737 89 ntBASIC3.69□□□□□ -1.82
APOEP02649 RMST_5.1-201ENST00000618704 126 ntBASIC3.69□□□□□ -1.82
APOEP02649 OR8B1P-202ENST00000641132 1178 ntBASIC3.69□□□□□ -1.82
APOEP02649 AL353746.1-201ENST00000566293 6881 ntBASIC3.69□□□□□ -1.82
APOEP02649 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
APOEP02649 AL365440.1-201ENST00000436135 2167 ntBASIC3.69□□□□□ -1.82
APOEP02649 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.69□□□□□ -1.82
APOEP02649 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
APOEP02649 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.68□□□□□ -1.82
APOEP02649 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.68□□□□□ -1.82
APOEP02649 AC092326.2-201ENST00000624772 1561 ntBASIC3.68□□□□□ -1.82
APOEP02649 AF127577.6-201ENST00000623352 2191 ntBASIC3.68□□□□□ -1.82
APOEP02649 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.68□□□□□ -1.82
APOEP02649 RAD1P1-201ENST00000231383 813 ntBASIC3.68□□□□□ -1.82
APOEP02649 RNA5SP235-201ENST00000365411 114 ntBASIC3.68□□□□□ -1.82
APOEP02649 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
APOEP02649 AL136116.1-201ENST00000403591 381 ntBASIC3.68□□□□□ -1.82
APOEP02649 U3.39-201ENST00000408569 239 ntBASIC3.68□□□□□ -1.82
APOEP02649 SDCBPP2-201ENST00000424643 885 ntBASIC3.68□□□□□ -1.82
APOEP02649 OSTCP5-201ENST00000425293 453 ntBASIC3.68□□□□□ -1.82
APOEP02649 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.68□□□□□ -1.82
APOEP02649 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.68□□□□□ -1.82
APOEP02649 AC010468.1-201ENST00000461022 817 ntBASIC3.68□□□□□ -1.82
APOEP02649 RPL23AP44-201ENST00000482216 473 ntBASIC3.68□□□□□ -1.82
APOEP02649 SNX5P1-201ENST00000505757 1041 ntBASIC3.68□□□□□ -1.82
APOEP02649 PCBP2P3-201ENST00000509726 843 ntBASIC3.68□□□□□ -1.82
APOEP02649 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.68□□□□□ -1.82
APOEP02649 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.68□□□□□ -1.82
APOEP02649 RNU2-27P-201ENST00000516185 142 ntBASIC3.68□□□□□ -1.82
APOEP02649 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
APOEP02649 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.68□□□□□ -1.82
APOEP02649 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.68□□□□□ -1.82
APOEP02649 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
APOEP02649 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.68□□□□□ -1.82
APOEP02649 MIR92B-201ENST00000607575 96 ntBASIC3.68□□□□□ -1.82
APOEP02649 AC092354.2-201ENST00000607786 514 ntBASIC3.68□□□□□ -1.82
APOEP02649 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.68□□□□□ -1.82
APOEP02649 U4.6-201ENST00000621618 127 ntBASIC3.68□□□□□ -1.82
APOEP02649 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.68□□□□□ -1.82
APOEP02649 MIR7153-201ENST00000637758 57 ntBASIC3.68□□□□□ -1.82
APOEP02649 AL133383.2-201ENST00000622958 2336 ntBASIC3.68□□□□□ -1.82
APOEP02649 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
APOEP02649 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.68□□□□□ -1.82
APOEP02649 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
APOEP02649 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
APOEP02649 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
APOEP02649 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
APOEP02649 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
APOEP02649 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
APOEP02649 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
APOEP02649 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
APOEP02649 AC092641.1-201ENST00000440229 772 ntBASIC3.67□□□□□ -1.82
APOEP02649 AC010683.1-201ENST00000473673 378 ntBASIC3.67□□□□□ -1.82
APOEP02649 ACTG1P13-201ENST00000486987 1043 ntBASIC3.67□□□□□ -1.82
APOEP02649 FCF1P3-201ENST00000496394 590 ntBASIC3.67□□□□□ -1.82
APOEP02649 AC110768.1-201ENST00000509222 400 ntBASIC3.67□□□□□ -1.82
APOEP02649 Vault.1-201ENST00000516474 102 ntBASIC3.67□□□□□ -1.82
APOEP02649 OR5B10P-201ENST00000532869 642 ntBASIC3.67□□□□□ -1.82
APOEP02649 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC3.67□□□□□ -1.82
APOEP02649 MIR4425-201ENST00000580572 84 ntBASIC3.67□□□□□ -1.82
APOEP02649 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.67□□□□□ -1.82
APOEP02649 MIR6075-201ENST00000620782 95 ntBASIC3.67□□□□□ -1.82
APOEP02649 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.67□□□□□ -1.82
APOEP02649 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.67□□□□□ -1.82
APOEP02649 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
APOEP02649 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.67□□□□□ -1.82
APOEP02649 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
APOEP02649 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
APOEP02649 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
APOEP02649 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
APOEP02649 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
APOEP02649 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
APOEP02649 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.66□□□□□ -1.82
APOEP02649 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
APOEP02649 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.66□□□□□ -1.82
APOEP02649 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
APOEP02649 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
APOEP02649 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
APOEP02649 GABPAP-201ENST00000419271 1356 ntBASIC3.66□□□□□ -1.82
APOEP02649 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.66□□□□□ -1.82
APOEP02649 PWAR6-201ENST00000552334 4618 ntBASIC3.66□□□□□ -1.82
APOEP02649 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
APOEP02649 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
APOEP02649 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms