Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
COL4A1P02462 CEP170P1-201ENST00000502249 4587 ntBASIC3.76□□□□□ -1.81
COL4A1P02462 OR5J1P-201ENST00000313544 939 ntBASIC3.76□□□□□ -1.81
COL4A1P02462 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
COL4A1P02462 SNORA71.1-201ENST00000364523 117 ntBASIC3.76□□□□□ -1.81
COL4A1P02462 AC104297.1-201ENST00000393779 870 ntBASIC3.76□□□□□ -1.81
COL4A1P02462 RANP4-201ENST00000413361 655 ntBASIC3.76□□□□□ -1.81
COL4A1P02462 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.76□□□□□ -1.81
COL4A1P02462 AC140076.1-201ENST00000449897 361 ntBASIC3.76□□□□□ -1.81
COL4A1P02462 ELOCP23-201ENST00000452014 332 ntBASIC3.76□□□□□ -1.81
COL4A1P02462 AL133477.1-201ENST00000457472 514 ntBASIC3.76□□□□□ -1.81
COL4A1P02462 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.76□□□□□ -1.81
COL4A1P02462 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.76□□□□□ -1.81
COL4A1P02462 AC018552.3-201ENST00000567416 561 ntBASIC3.76□□□□□ -1.81
COL4A1P02462 AC008507.1-201ENST00000587506 734 ntBASIC3.76□□□□□ -1.81
COL4A1P02462 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.76□□□□□ -1.81
COL4A1P02462 AC245100.7-201ENST00000609678 442 ntBASIC3.76□□□□□ -1.81
COL4A1P02462 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC3.76□□□□□ -1.81
COL4A1P02462 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.76□□□□□ -1.81
COL4A1P02462 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
COL4A1P02462 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
COL4A1P02462 AC007336.1-201ENST00000576365 3828 ntBASIC3.76□□□□□ -1.81
COL4A1P02462 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
COL4A1P02462 SNORA5B-201ENST00000363786 132 ntBASIC3.75□□□□□ -1.81
COL4A1P02462 RNU6-55P-201ENST00000411092 107 ntBASIC3.75□□□□□ -1.81
COL4A1P02462 RNU6-954P-201ENST00000411355 107 ntBASIC3.75□□□□□ -1.81
COL4A1P02462 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.75□□□□□ -1.81
COL4A1P02462 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.75□□□□□ -1.81
COL4A1P02462 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.75□□□□□ -1.81
COL4A1P02462 AC011602.1-201ENST00000546484 331 ntBASIC3.75□□□□□ -1.81
COL4A1P02462 SETP1-201ENST00000556014 845 ntBASIC3.75□□□□□ -1.81
COL4A1P02462 MIR4319-201ENST00000577285 85 ntBASIC3.75□□□□□ -1.81
COL4A1P02462 MIR3162-201ENST00000581818 82 ntBASIC3.75□□□□□ -1.81
COL4A1P02462 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC3.75□□□□□ -1.81
COL4A1P02462 AC016590.3-201ENST00000611171 753 ntBASIC3.75□□□□□ -1.81
COL4A1P02462 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.75□□□□□ -1.81
COL4A1P02462 AC027287.1-201ENST00000553115 1453 ntBASIC3.75□□□□□ -1.81
COL4A1P02462 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
COL4A1P02462 RN7SKP222-201ENST00000410651 315 ntBASIC3.75□□□□□ -1.81
COL4A1P02462 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.75□□□□□ -1.81
COL4A1P02462 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.75□□□□□ -1.81
COL4A1P02462 KC877373.1-201ENST00000479066 408 ntBASIC3.75□□□□□ -1.81
COL4A1P02462 OR5H3P-201ENST00000502817 919 ntBASIC3.75□□□□□ -1.81
COL4A1P02462 VN1R104P-201ENST00000505115 1009 ntBASIC3.75□□□□□ -1.81
COL4A1P02462 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
COL4A1P02462 HIGD1AP13-201ENST00000509878 289 ntBASIC3.75□□□□□ -1.81
COL4A1P02462 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.75□□□□□ -1.81
COL4A1P02462 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.75□□□□□ -1.81
COL4A1P02462 OOSP1P2-201ENST00000579644 351 ntBASIC3.75□□□□□ -1.81
COL4A1P02462 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
COL4A1P02462 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.75□□□□□ -1.81
COL4A1P02462 AL713922.2-201ENST00000619384 716 ntBASIC3.75□□□□□ -1.81
COL4A1P02462 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.75□□□□□ -1.81
COL4A1P02462 MIR622-201ENST00000638396 96 ntBASIC3.75□□□□□ -1.81
COL4A1P02462 AC139713.2-210ENST00000641741 992 ntBASIC3.75□□□□□ -1.81
COL4A1P02462 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.74□□□□□ -1.81
COL4A1P02462 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.74□□□□□ -1.81
COL4A1P02462 MIR22-201ENST00000362190 85 ntBASIC3.74□□□□□ -1.81
COL4A1P02462 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.74□□□□□ -1.81
COL4A1P02462 AL139281.1-201ENST00000422120 335 ntBASIC3.74□□□□□ -1.81
COL4A1P02462 AC005002.1-201ENST00000447458 540 ntBASIC3.74□□□□□ -1.81
COL4A1P02462 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.74□□□□□ -1.81
COL4A1P02462 RPS4XP22-201ENST00000480755 780 ntBASIC3.74□□□□□ -1.81
COL4A1P02462 RN7SL20P-201ENST00000488827 297 ntBASIC3.74□□□□□ -1.81
COL4A1P02462 OR2A20P-203ENST00000498397 1268 ntBASIC3.74□□□□□ -1.81
COL4A1P02462 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.74□□□□□ -1.81
COL4A1P02462 ARL2BPP6-201ENST00000512757 439 ntBASIC3.74□□□□□ -1.81
COL4A1P02462 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
COL4A1P02462 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.74□□□□□ -1.81
COL4A1P02462 AC141257.3-201ENST00000572906 215 ntBASIC3.74□□□□□ -1.81
COL4A1P02462 AC009948.4-201ENST00000604692 675 ntBASIC3.74□□□□□ -1.81
COL4A1P02462 AC116312.1-201ENST00000606841 314 ntBASIC3.74□□□□□ -1.81
COL4A1P02462 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC3.74□□□□□ -1.81
COL4A1P02462 AC096644.4-201ENST00000563417 2912 ntBASIC3.74□□□□□ -1.81
COL4A1P02462 RIOK3P1-201ENST00000418778 1528 ntBASIC3.74□□□□□ -1.81
COL4A1P02462 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
COL4A1P02462 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC3.73□□□□□ -1.81
COL4A1P02462 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
COL4A1P02462 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.73□□□□□ -1.81
COL4A1P02462 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC3.73□□□□□ -1.81
COL4A1P02462 MTCO3P20-201ENST00000454926 688 ntBASIC3.73□□□□□ -1.81
COL4A1P02462 PRDX3P4-201ENST00000470828 747 ntBASIC3.73□□□□□ -1.81
COL4A1P02462 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.73□□□□□ -1.81
COL4A1P02462 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.73□□□□□ -1.81
COL4A1P02462 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.73□□□□□ -1.81
COL4A1P02462 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC3.73□□□□□ -1.81
COL4A1P02462 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.73□□□□□ -1.81
COL4A1P02462 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
COL4A1P02462 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC3.73□□□□□ -1.81
COL4A1P02462 AC005332.5-201ENST00000591222 2919 ntBASIC3.73□□□□□ -1.81
COL4A1P02462 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
COL4A1P02462 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.73□□□□□ -1.81
COL4A1P02462 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
COL4A1P02462 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.73□□□□□ -1.81
COL4A1P02462 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
COL4A1P02462 NACAP7-201ENST00000407371 609 ntBASIC3.72□□□□□ -1.81
COL4A1P02462 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.72□□□□□ -1.81
COL4A1P02462 RPL12P46-201ENST00000436610 195 ntBASIC3.72□□□□□ -1.81
COL4A1P02462 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC3.72□□□□□ -1.81
COL4A1P02462 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms