Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.25□□□□□ -1.89
TNFP01375 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.25□□□□□ -1.89
TNFP01375 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.25□□□□□ -1.89
TNFP01375 AC012493.2-201ENST00000595083 291 ntBASIC3.25□□□□□ -1.89
TNFP01375 AL034351.1-201ENST00000605288 668 ntBASIC3.25□□□□□ -1.89
TNFP01375 AC006946.3-201ENST00000609791 756 ntBASIC3.25□□□□□ -1.89
TNFP01375 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.25□□□□□ -1.89
TNFP01375 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TNFP01375 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.25□□□□□ -1.89
TNFP01375 AC093010.3-201ENST00000570269 15214 ntBASIC3.25□□□□□ -1.89
TNFP01375 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.25□□□□□ -1.89
TNFP01375 EXOC5P1-201ENST00000510543 1969 ntBASIC3.25□□□□□ -1.89
TNFP01375 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
TNFP01375 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
TNFP01375 AL592437.2-201ENST00000421655 2434 ntBASIC3.24□□□□□ -1.89
TNFP01375 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TNFP01375 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TNFP01375 AL021368.2-201ENST00000606125 5352 ntBASIC3.24□□□□□ -1.89
TNFP01375 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TNFP01375 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.24□□□□□ -1.89
TNFP01375 AC104297.1-201ENST00000393779 870 ntBASIC3.24□□□□□ -1.89
TNFP01375 AC063979.1-201ENST00000415539 377 ntBASIC3.24□□□□□ -1.89
TNFP01375 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.24□□□□□ -1.89
TNFP01375 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.24□□□□□ -1.89
TNFP01375 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.24□□□□□ -1.89
TNFP01375 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.24□□□□□ -1.89
TNFP01375 HMGB3P10-201ENST00000434734 572 ntBASIC3.24□□□□□ -1.89
TNFP01375 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.24□□□□□ -1.89
TNFP01375 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.24□□□□□ -1.89
TNFP01375 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.24□□□□□ -1.89
TNFP01375 NIPA2P2-201ENST00000496376 1083 ntBASIC3.24□□□□□ -1.89
TNFP01375 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.24□□□□□ -1.89
TNFP01375 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.24□□□□□ -1.89
TNFP01375 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.24□□□□□ -1.89
TNFP01375 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.24□□□□□ -1.89
TNFP01375 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.24□□□□□ -1.89
TNFP01375 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.24□□□□□ -1.89
TNFP01375 CASP1-216ENST00000534497 825 ntTSL 5 BASIC3.24□□□□□ -1.89
TNFP01375 AL109741.3-201ENST00000561748 592 ntBASIC3.24□□□□□ -1.89
TNFP01375 AC106785.3-201ENST00000564064 847 ntBASIC3.24□□□□□ -1.89
TNFP01375 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.24□□□□□ -1.89
TNFP01375 AC005000.2-201ENST00000605468 310 ntBASIC3.24□□□□□ -1.89
TNFP01375 AC067838.1-201ENST00000606064 577 ntBASIC3.24□□□□□ -1.89
TNFP01375 AL135786.2-201ENST00000608422 615 ntBASIC3.24□□□□□ -1.89
TNFP01375 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.24□□□□□ -1.89
TNFP01375 AL157817.1-201ENST00000614264 790 ntBASIC3.24□□□□□ -1.89
TNFP01375 AC009464.1-201ENST00000615731 469 ntBASIC3.24□□□□□ -1.89
TNFP01375 U7.8-201ENST00000619968 63 ntBASIC3.24□□□□□ -1.89
TNFP01375 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.24□□□□□ -1.89
TNFP01375 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
TNFP01375 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
TNFP01375 AC114546.3-201ENST00000623582 1734 ntBASIC3.24□□□□□ -1.89
TNFP01375 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.24□□□□□ -1.89
TNFP01375 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TNFP01375 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TNFP01375 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
TNFP01375 XIAPP3-201ENST00000312918 795 ntBASIC3.23□□□□□ -1.89
TNFP01375 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TNFP01375 RPL5P19-201ENST00000404228 893 ntBASIC3.23□□□□□ -1.89
TNFP01375 Z92545.1-201ENST00000411782 234 ntBASIC3.23□□□□□ -1.89
TNFP01375 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.23□□□□□ -1.89
TNFP01375 AL356968.1-201ENST00000416622 474 ntBASIC3.23□□□□□ -1.89
TNFP01375 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.23□□□□□ -1.89
TNFP01375 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC3.23□□□□□ -1.89
TNFP01375 AC012065.2-201ENST00000421295 375 ntBASIC3.23□□□□□ -1.89
TNFP01375 AL513174.1-201ENST00000423182 629 ntBASIC3.23□□□□□ -1.89
TNFP01375 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.23□□□□□ -1.89
TNFP01375 AC091390.3-201ENST00000426478 338 ntBASIC3.23□□□□□ -1.89
TNFP01375 RPL12P26-201ENST00000452430 487 ntBASIC3.23□□□□□ -1.89
TNFP01375 SNRPGP5-201ENST00000456003 220 ntBASIC3.23□□□□□ -1.89
TNFP01375 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.23□□□□□ -1.89
TNFP01375 MTND6P6-201ENST00000478031 263 ntBASIC3.23□□□□□ -1.89
TNFP01375 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC3.23□□□□□ -1.89
TNFP01375 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.23□□□□□ -1.89
TNFP01375 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.23□□□□□ -1.89
TNFP01375 RN7SL504P-201ENST00000494496 287 ntBASIC3.23□□□□□ -1.89
TNFP01375 FCF1P3-201ENST00000496394 590 ntBASIC3.23□□□□□ -1.89
TNFP01375 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.23□□□□□ -1.89
TNFP01375 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.23□□□□□ -1.89
TNFP01375 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.23□□□□□ -1.89
TNFP01375 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC3.23□□□□□ -1.89
TNFP01375 AC109635.6-201ENST00000525487 1113 ntBASIC3.23□□□□□ -1.89
TNFP01375 AC093014.1-201ENST00000548926 724 ntBASIC3.23□□□□□ -1.89
TNFP01375 AC004024.1-201ENST00000549244 247 ntBASIC3.23□□□□□ -1.89
TNFP01375 AC005476.1-201ENST00000554427 397 ntBASIC3.23□□□□□ -1.89
TNFP01375 AC018552.3-201ENST00000567416 561 ntBASIC3.23□□□□□ -1.89
TNFP01375 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.23□□□□□ -1.89
TNFP01375 MIR5004-201ENST00000579078 107 ntBASIC3.23□□□□□ -1.89
TNFP01375 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.23□□□□□ -1.89
TNFP01375 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.23□□□□□ -1.89
TNFP01375 uc_338.1-201ENST00000612113 180 ntBASIC3.23□□□□□ -1.89
TNFP01375 AC022960.2-201ENST00000616300 666 ntBASIC3.23□□□□□ -1.89
TNFP01375 AC000123.2-201ENST00000623124 461 ntBASIC3.23□□□□□ -1.89
TNFP01375 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.23□□□□□ -1.89
TNFP01375 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
TNFP01375 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TNFP01375 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.23□□□□□ -1.89
TNFP01375 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.22□□□□□ -1.89
TNFP01375 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
TNFP01375 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms