Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC4.09□□□□□ -1.75
PDGFBP01127 RPL23AP97-201ENST00000568955 471 ntBASIC4.09□□□□□ -1.75
PDGFBP01127 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.09□□□□□ -1.75
PDGFBP01127 AC012254.4-201ENST00000588843 273 ntBASIC4.09□□□□□ -1.75
PDGFBP01127 AC244505.7-201ENST00000599675 272 ntBASIC4.09□□□□□ -1.75
PDGFBP01127 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.09□□□□□ -1.75
PDGFBP01127 AC112503.1-201ENST00000608436 391 ntBASIC4.09□□□□□ -1.75
PDGFBP01127 RNU6-156P-201ENST00000621869 107 ntBASIC4.09□□□□□ -1.75
PDGFBP01127 AC097372.4-201ENST00000625025 466 ntBASIC4.09□□□□□ -1.75
PDGFBP01127 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
PDGFBP01127 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.09□□□□□ -1.75
PDGFBP01127 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.09□□□□□ -1.75
PDGFBP01127 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.09□□□□□ -1.75
PDGFBP01127 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.09□□□□□ -1.75
PDGFBP01127 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.09□□□□□ -1.75
PDGFBP01127 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.09□□□□□ -1.75
PDGFBP01127 AL672167.1-203ENST00000641299 2975 ntBASIC4.09□□□□□ -1.75
PDGFBP01127 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PDGFBP01127 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
PDGFBP01127 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
PDGFBP01127 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
PDGFBP01127 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PDGFBP01127 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
PDGFBP01127 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PDGFBP01127 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PDGFBP01127 RNU2-21P-201ENST00000410368 188 ntBASIC4.08□□□□□ -1.76
PDGFBP01127 AC096664.2-201ENST00000411843 406 ntBASIC4.08□□□□□ -1.76
PDGFBP01127 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PDGFBP01127 EIF4A1P1-201ENST00000420241 934 ntBASIC4.08□□□□□ -1.76
PDGFBP01127 AL139247.1-201ENST00000422768 325 ntBASIC4.08□□□□□ -1.76
PDGFBP01127 AC092832.1-201ENST00000422934 400 ntBASIC4.08□□□□□ -1.76
PDGFBP01127 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.08□□□□□ -1.76
PDGFBP01127 UBE2V1P5-201ENST00000440070 405 ntBASIC4.08□□□□□ -1.76
PDGFBP01127 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.08□□□□□ -1.76
PDGFBP01127 HMGN1P5-201ENST00000448591 263 ntBASIC4.08□□□□□ -1.76
PDGFBP01127 RPL7P55-201ENST00000450522 746 ntBASIC4.08□□□□□ -1.76
PDGFBP01127 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.08□□□□□ -1.76
PDGFBP01127 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.08□□□□□ -1.76
PDGFBP01127 AC008280.2-201ENST00000455473 307 ntBASIC4.08□□□□□ -1.76
PDGFBP01127 DCAF13P1-201ENST00000495256 1330 ntBASIC4.08□□□□□ -1.76
PDGFBP01127 OR5H3P-201ENST00000502817 919 ntBASIC4.08□□□□□ -1.76
PDGFBP01127 PTGES3P3-201ENST00000511479 482 ntBASIC4.08□□□□□ -1.76
PDGFBP01127 SCARNA14-201ENST00000516903 136 ntBASIC4.08□□□□□ -1.76
PDGFBP01127 RNA5SP179-201ENST00000517284 121 ntBASIC4.08□□□□□ -1.76
PDGFBP01127 AC090136.1-201ENST00000520009 240 ntBASIC4.08□□□□□ -1.76
PDGFBP01127 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.08□□□□□ -1.76
PDGFBP01127 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.08□□□□□ -1.76
PDGFBP01127 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.08□□□□□ -1.76
PDGFBP01127 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.08□□□□□ -1.76
PDGFBP01127 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.08□□□□□ -1.76
PDGFBP01127 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.08□□□□□ -1.76
PDGFBP01127 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.08□□□□□ -1.76
PDGFBP01127 AC091488.1-201ENST00000604239 660 ntBASIC4.08□□□□□ -1.76
PDGFBP01127 AL049634.3-201ENST00000604968 457 ntBASIC4.08□□□□□ -1.76
PDGFBP01127 AC091167.4-201ENST00000605079 184 ntBASIC4.08□□□□□ -1.76
PDGFBP01127 AC120053.1-201ENST00000607706 736 ntBASIC4.08□□□□□ -1.76
PDGFBP01127 SNORD91B-202ENST00000608459 222 ntBASIC4.08□□□□□ -1.76
PDGFBP01127 RMST_10.1-201ENST00000616309 154 ntBASIC4.08□□□□□ -1.76
PDGFBP01127 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.08□□□□□ -1.76
PDGFBP01127 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.08□□□□□ -1.76
PDGFBP01127 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.08□□□□□ -1.76
PDGFBP01127 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC4.08□□□□□ -1.76
PDGFBP01127 AL590396.2-201ENST00000636511 1041 ntBASIC4.08□□□□□ -1.76
PDGFBP01127 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
PDGFBP01127 MAPK10-286ENST00000641208 8747 ntBASIC4.08□□□□□ -1.76
PDGFBP01127 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PDGFBP01127 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
PDGFBP01127 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.08□□□□□ -1.76
PDGFBP01127 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PDGFBP01127 SAGE4P-201ENST00000442271 3381 ntBASIC4.08□□□□□ -1.76
PDGFBP01127 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
PDGFBP01127 Z82217.1-201ENST00000625157 8149 ntBASIC4.07□□□□□ -1.76
PDGFBP01127 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PDGFBP01127 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.07□□□□□ -1.76
PDGFBP01127 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.07□□□□□ -1.76
PDGFBP01127 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PDGFBP01127 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PDGFBP01127 SNORD56.4-201ENST00000363883 71 ntBASIC4.07□□□□□ -1.76
PDGFBP01127 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PDGFBP01127 RNU6-481P-201ENST00000384194 107 ntBASIC4.07□□□□□ -1.76
PDGFBP01127 AL121834.1-202ENST00000404494 277 ntBASIC4.07□□□□□ -1.76
PDGFBP01127 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.07□□□□□ -1.76
PDGFBP01127 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.07□□□□□ -1.76
PDGFBP01127 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC4.07□□□□□ -1.76
PDGFBP01127 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC4.07□□□□□ -1.76
PDGFBP01127 PSMA2P3-201ENST00000429685 675 ntBASIC4.07□□□□□ -1.76
PDGFBP01127 FTH1P6-201ENST00000430768 320 ntBASIC4.07□□□□□ -1.76
PDGFBP01127 AL358472.1-201ENST00000431295 329 ntBASIC4.07□□□□□ -1.76
PDGFBP01127 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.07□□□□□ -1.76
PDGFBP01127 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.07□□□□□ -1.76
PDGFBP01127 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.07□□□□□ -1.76
PDGFBP01127 RPL5P24-201ENST00000463742 885 ntBASIC4.07□□□□□ -1.76
PDGFBP01127 AC073522.1-201ENST00000483312 377 ntBASIC4.07□□□□□ -1.76
PDGFBP01127 HMGN1P11-201ENST00000508668 303 ntBASIC4.07□□□□□ -1.76
PDGFBP01127 Vault.1-201ENST00000516474 102 ntBASIC4.07□□□□□ -1.76
PDGFBP01127 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.07□□□□□ -1.76
PDGFBP01127 NDUFA5P2-201ENST00000519723 344 ntBASIC4.07□□□□□ -1.76
PDGFBP01127 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.07□□□□□ -1.76
PDGFBP01127 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.07□□□□□ -1.76
PDGFBP01127 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms